| Literature DB >> 31818875 |
Guoling Li1, Xianwei Zhang2, Haoqiang Wang1, Jianxin Mo2, Cuili Zhong2, Junsong Shi2, Rong Zhou2, Zicong Li1, Huaqiang Yang1,2, Zhenfang Wu3,2, Dewu Liu3.
Abstract
Clustered regularly interspaced short palindromic repeats (CRISPR)-associated protein 9 (Cas9) is a precise genome manipulating tool that can produce targeted gene mutations in various cells and organisms. Although CRISPR/Cas9 can efficiently generate gene knockout, the gene knock-in (KI) efficiency mediated by homology-directed repair remains low, especially for large fragment integration. In this study, we established an efficient method for the CRISPR/Cas9-mediated integration of large transgene cassette, which carries salivary gland-expressed multiple digestion enzymes (≈ 20 kbp) in CEP112 locus in pig fetal fibroblasts (PFFs). Our results showed that using an optimal homology donor with a short and a long arm yielded the best CRISPR/Cas9-mediated KI efficiency in CEP112 locus, and the targeting efficiency in CEP112 locus was higher than in ROSA26 locus. The CEP112 KI cell lines were used as nuclear donors for somatic cell nuclear transfer to create genetically modified pigs. We found that KI pig (705) successfully expressed three microbial enzymes (β-glucanase, xylanase, and phytase) in salivary gland. This finding suggested that the CEP112 locus supports exogenous gene expression by a tissue-specific promoter. In summary, we successfully targeted CEP112 locus in pigs by using our optimal homology arm system and established a modified pig model for foreign digestion enzyme expression in the saliva.Entities:
Keywords: CEP112; CRISPR/Cas9; genetically modified pig; homology arm; safe harbor
Year: 2020 PMID: 31818875 PMCID: PMC7003105 DOI: 10.1534/g3.119.400810
Source DB: PubMed Journal: G3 (Bethesda) ISSN: 2160-1836 Impact factor: 3.154
Figure 1Screening of sgRNA with high cleavage efficiency in CEP112 locus. (a) Fluorescence expression in PFFs co-transfected with sgRNAs and pBb-ubc-eGFP. (b) Determination of the cleavage efficiency by T7E1 assay. The red and black asterisks indicate cut and uncut bands, respectively. (c) Sanger sequencing further confirmed the cleavage rates of sgRNAs C3, C5, and C7 in the CEP112 locus. Eight mutant alleles are used as representatives. Indels are shown in red letters and dashes. Protospacer adjacent motif (PAM) sequences are presented in blue.
Figure 2Effects of the length of HA on the screening of KI cell lines. (a) Schematic diagram of the strategy for the insertion of the BgEgXyAp and fluorescence-labeling genes into porcine CEP112 intron 5. Triangles indicate Cas9 targeting sites, blue letters are PAM sequences, pink dashes indicate loxp sequence, and red arrows are primer sets for PCR assay. (b) Fluorescent monoclonal cell screening. (c) Analysis of KI event by gel electrophoresis. (d) Fluorescent labeling gene was deleted by Cre enzyme before SCNT.
Summary of KI events of different proportions of HAs
| Target events | |||||
|---|---|---|---|---|---|
| Plasmid (LARA) | First | Second | Third | HDR efficiency (%) | |
| Circular | CEP112-LA1199RA1999 | 0/7 | 0/8 | 0/15 | 0 ± 0 |
| CEP112-LA2003RA1999 | 0/13 | 0/12 | 0/25 | 0 ± 0 | |
| CEP112-LA250RA3219 | 2/20 | 3/22 | 5/40 | 12.06 ± 1.08b | |
| CEP112-LA340RA3219 | 5/38 | 7/44 | 14/119 | 13.61 ± 1.22b | |
| ROSA26-LA320RA1214 | 0/7 | 0/9 | 0/13 | 0 ± 0 | |
| ROSA26-LA320RA2046 | 0/11 | 0/10 | 0/10 | 0 ± 0 | |
| ROSA26-LA320RA3769 | 1/13 | 1/19 | 3/31 | 7.54 ± 1.28c,d | |
| ROSA26-LA1040RA1214 | 0/6 | 0/13 | 0/8 | 0 ± 0 | |
| ROSA26-LA1040RA2046 | 0/2 | 1/17 | 1/19 | 3.71 ± 1.87e | |
| ROSA26-LA1040RA3769 | 0/12 | 0/17 | 2/43 | 1.55 ± 1.55 | |
| Linear | CEP112-LA250RA3219 | 2/35 | 1/33 | 4/64 | 5.00 ± 1.00c,e |
| CEP112-LA340RA3219 | 2/18 | 3/22 | 4/32 | 12.42 ± 0.73b | |
Donor plasmid, for example CEP112-LA1199RA1999 represents with 1199bp LA and 1999bp RA.
Different letters (a,b,c,d,e) indicates statistical significant differences (P < 0.05).
Embryo transfer data for cloned pigs
| Pooled cell lines | Embryos (No.) | Transfers (No.) | Pregnant | Birth | ||
|---|---|---|---|---|---|---|
| Total | KI | Non-KI | ||||
| 3 cell lines | 212 | 1 | estrus return | — | — | — |
| 228 | 1 | normal | 4 live piglets | 2 live (♂, 1 healthy and 1 dead at day 6) | 2 live (♂, 2 dead at day 6) | |
| 218 | 1 | normal | 3 live piglets and 3 stillborn | 1 live (♂, 1 dead at day 28) and 1 stillborn | 2 live (♂, 2 healthy) and 2 stillborn | |
| 218 | 1 | abortions | — | — | — | |
| Total | 876 | 4 | 2 sows | 10 piglets (7 live pigs and 3 stillborn) | 4 piglets (1 healty, 1 survive to weaning, and 2 dead) | 6 piglets (2 healthy and 4 dead) |
Figure 3Generation of cloned pigs by using CRISPR/Cas9-mediated HDR system. (a) Genomic DNA of the cloned pigs was amplified by PCR and analyzed by gel electrophoresis. (b) The live KI pig (705) aged 1 month. (c) PCR products of KI loci were sequenced. Blue represents the junction sequences of the HAs and KI locus. (d) Sequences of the targeted CEP112 loci of all cloned pigs. KI pigs are shown with red numbers. Red letters and dashes represent indels. PAM sequence is displayed in blue.
Figure 4Presence of transgene and expression in KI pigs. (a) Calculation of the copy number of the integrated gene in KI pigs according to the standard curve. (b) Southern blot analysis result of multi-enzyme transgene integration in KI pigs. Genomic DNA of KI pigs was digested by two restriction endonucleases, BsrGI and XmnI. (c) Salivary β-glucanase, xylanase, and phytase activity assays of KI pigs at 1 and 6 months. (d) Western blot analysis demonstrated the expression of Bg17N and EAPPA in the saliva of KI pig (705). Plus sign indicates positive sample; P represents donor vector; NC and Non represent non-modified pig and non-KI pig, respectively. Values are shown as mean ± SEM. The asterisk represents P < 0.01.