Literature DB >> 31811375

Key Factors for Removing Bias in Viability PCR-Based Methods: A Review.

F Codony1, M Dinh-Thanh2, G Agustí3.   

Abstract

During the last decade, the viability PCR approach has been investigated intensively with the goal of detecting solely the DNA derived from intact cells by removing the bias resulting from dead or damaged cell artifacts. However, since the first published paper in 2003 and despite the various continuous improvements, the stubborn reality is that in most cases the goal has not been achieved. Complete neutralization of nucleic acids derived from dead microorganisms was not possible, at least without affecting live cells. However, recently published works in this field show how neutralization rates can be improved. In this communication, we review recent improvements that enable effective vPCR procedures.

Year:  2019        PMID: 31811375     DOI: 10.1007/s00284-019-01829-y

Source DB:  PubMed          Journal:  Curr Microbiol        ISSN: 0343-8651            Impact factor:   2.188


  7 in total

1.  Legionella: A Promising Supplementary Indicator of Microbial Drinking Water Quality in Municipal Engineered Water Systems.

Authors:  Chiqian Zhang; Jingrang Lu
Journal:  Front Environ Sci       Date:  2021-11-10

2.  Capsid integrity quantitative PCR to determine virus infectivity in environmental and food applications - A systematic review.

Authors:  Mats Leifels; Dan Cheng; Emanuele Sozzi; David C Shoults; Stefan Wuertz; Skorn Mongkolsuk; Kwanrawee Sirikanchana
Journal:  Water Res X       Date:  2020-12-09

3.  Toward Accurate and Robust Environmental Surveillance Using Metagenomics.

Authors:  Jiaxian Shen; Alexander G McFarland; Vincent B Young; Mary K Hayden; Erica M Hartmann
Journal:  Front Genet       Date:  2021-03-05       Impact factor: 4.599

4.  New immunomagnetic separation method to analyze risk factors for Legionella colonization in health care centres.

Authors:  Rafael Manuel Ortí-Lucas; Eugenio Luciano
Journal:  J Expo Sci Environ Epidemiol       Date:  2022-03-09       Impact factor: 6.371

5.  Quantification of Bacterial DNA from Infected Human Root Canals Using qPCR and DAPI after Disinfection with Established and Novel Irrigation Protocols.

Authors:  Marie-Theres Weber; Yousef Alkhafaji; Anne Pioch; Evelyn Trips; Sabine Basche; Martin Dannemann; Alan Kilistoff; Christian Hannig; Torsten Sterzenbach
Journal:  Materials (Basel)       Date:  2022-03-04       Impact factor: 3.623

Review 6.  A critical analysis of research methods and experimental models to study irrigants and irrigation systems.

Authors:  Christos Boutsioukis; Maria Teresa Arias-Moliz; Luis E Chávez de Paz
Journal:  Int Endod J       Date:  2022-03-06       Impact factor: 5.165

7.  An Assay Combining Droplet Digital PCR With Propidium Monoazide Treatment for the Accurate Detection of Live Cells of Vibrio vulnificus in Plasma Samples.

Authors:  Ling Hu; Yidong Fu; Shun Zhang; Zhilei Pan; Jiang Xia; Peng Zhu; Jing Guo
Journal:  Front Microbiol       Date:  2022-07-15       Impact factor: 6.064

  7 in total

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