Literature DB >> 31809642

A new chiral boron-dipyrromethene (BODIPY)-based fluorescent probe: molecular docking, DFT, antibacterial and antioxidant approaches.

Rua B Alnoman1, Shazia Parveen1, Mohamad Hagar1,2, Hoda A Ahmed1,3, Julian G Knight4.   

Abstract

A new chiral BODIPY-based fluorescent compound, 5-bromo-4,4-difluoro-3(S)-1-phenylethyl)amino) BODIPY, 4 was synthesized for biomedical applications. Optical, antimicrobial, antioxidant properties of the compound 4 are investigated. The partition coefficient suggested that the compound 4 has the potential to be developed as an active antibacterial and antioxidant candidate. In this context, antibacterial assay was carried out for compound 4 against various bacterial strains, revealing maximum inhibition zone (24 ± 2.19 mm) in Escherichia coli. Moreover, results of antioxidant activity of compound 4 revealed IC50 values to be greater than ascorbic acid. Molecular docking has given brief insight about the binding of the compound 4, suggesting that it has a strong potential to inhibit bacterial target enzymes viz., DNA gyrase, enzymes in the type II fatty acid synthesis and Ddl (d-alanine: d-alanine ligase) in peptidoglycan synthesis. The molecular geometry and electrostatic potential of compound 4, was established by DFT (Density Functional Theory) calculations.AbbreviationsBBBblood‒brain barrierBDEbond dissociation energyBODIPYboron-dipyrromethaneDdlD-alanine:D-alanine ligaseDDQ2,3-dichloro-5,6-dicyano-1,4-benzoquinoneDFTdensity functional theoryDNAdeoxyribonucleic acidDPPH1,1‒diphenyl‒2‒picrylhydrazylNBSN-bromo succinimideROSreactive oxygen speciesUV-visultraviolet-visibleFMOfrontier molecular orbitalsHOMOhighest occupied molecular orbitalLUMOlowest unoccupied molecular orbitalCommunicated by Ramaswamy H. Sarma.

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Keywords:  BODIPY; DFT; antibacterial; antioxidant; molecular docking

Mesh:

Substances:

Year:  2019        PMID: 31809642     DOI: 10.1080/07391102.2019.1701555

Source DB:  PubMed          Journal:  J Biomol Struct Dyn        ISSN: 0739-1102


  5 in total

1.  Chair- and V-Shaped of H-bonded Supramolecular Complexes of Azophenyl Nicotinate Derivatives; Mesomorphic and DFT Molecular Geometry Aspects.

Authors:  Omaima A Alhaddad; Khulood A Abu Al-Ola; Mohamed Hagar; Hoda A Ahmed
Journal:  Molecules       Date:  2020-03-26       Impact factor: 4.411

2.  New Symmetrical U- and Wavy-Shaped Supramolecular H-Bonded Systems; Geometrical and Mesomorphic Approaches.

Authors:  Laila A Al-Mutabagani; Latifah Abdullah Alshabanah; Hoda A Ahmed; Mohamed Hagar; Khulood A Abu Al-Ola
Journal:  Molecules       Date:  2020-03-20       Impact factor: 4.411

3.  Experimental and Theoretical Approaches of New Nematogenic Chair Architectures of Supramolecular H-Bonded Liquid Crystals.

Authors:  O A Alhaddad; H A Ahmed; M Hagar
Journal:  Molecules       Date:  2020-01-16       Impact factor: 4.411

4.  A New Family of Benzo[h]Chromene Based Azo Dye: Synthesis, In-Silico and DFT Studies with In Vitro Antimicrobial and Antiproliferative Assessment.

Authors:  Alaa S Abd-El-Aziz; Azhaar Alsaggaf; Eman Assirey; Arshi Naqvi; Rawda M Okasha; Tarek H Afifi; Mohamed Hagar
Journal:  Int J Mol Sci       Date:  2021-03-10       Impact factor: 5.923

5.  AoPEX1 and AoPEX6 Are Required for Mycelial Growth, Conidiation, Stress Response, Fatty Acid Utilization, and Trap Formation in Arthrobotrys oligospora.

Authors:  Qianqian Liu; Dongni Li; Kexin Jiang; Ke-Qin Zhang; Jinkui Yang
Journal:  Microbiol Spectr       Date:  2022-03-24
  5 in total

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