Literature DB >> 31806786

Targeted selection of HIV-specific antibody mutations by engineering B cell maturation.

Kevin O Saunders1,2,3, Kevin Wiehe4, Ming Tian5, Priyamvada Acharya6, Todd Bradley4, S Munir Alam4, Eden P Go7, Richard Scearce4, Laura Sutherland4, Rory Henderson4, Allen L Hsu8, Mario J Borgnia8, Haiyan Chen4, Xiaozhi Lu4, Nelson R Wu4, Brian Watts4, Chuancang Jiang4, David Easterhoff4, Hwei-Ling Cheng5, Kelly McGovern5, Peyton Waddicor5, Aimee Chapdelaine-Williams5, Amanda Eaton4, Jinsong Zhang4, Wes Rountree4, Laurent Verkoczy4, Mark Tomai9, Mark G Lewis10, Heather R Desaire7, Robert J Edwards4, Derek W Cain4, Mattia Bonsignori4, David Montefiori6, Frederick W Alt11, Barton F Haynes12,4.   

Abstract

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Year:  2019        PMID: 31806786      PMCID: PMC7168753          DOI: 10.1126/science.aay7199

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


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  92 in total

Review 1.  The art of the probable: system control in the adaptive immune system.

Authors:  R N Germain
Journal:  Science       Date:  2001-07-13       Impact factor: 47.728

2.  Vaccine Elicitation of High Mannose-Dependent Neutralizing Antibodies against the V3-Glycan Broadly Neutralizing Epitope in Nonhuman Primates.

Authors:  Kevin O Saunders; Nathan I Nicely; Kevin Wiehe; Mattia Bonsignori; R Ryan Meyerhoff; Robert Parks; William E Walkowicz; Baptiste Aussedat; Nelson R Wu; Fangping Cai; Yusuf Vohra; Peter K Park; Amanda Eaton; Eden P Go; Laura L Sutherland; Richard M Scearce; Dan H Barouch; Ruijun Zhang; Tarra Von Holle; R Glenn Overman; Kara Anasti; Rogier W Sanders; M Anthony Moody; Thomas B Kepler; Bette Korber; Heather Desaire; Sampa Santra; Norman L Letvin; Gary J Nabel; David C Montefiori; Georgia D Tomaras; Hua-Xin Liao; S Munir Alam; Samuel J Danishefsky; Barton F Haynes
Journal:  Cell Rep       Date:  2017-02-28       Impact factor: 9.423

3.  High-throughput isolation of immunoglobulin genes from single human B cells and expression as monoclonal antibodies.

Authors:  Hua-Xin Liao; Marc C Levesque; Ashleigh Nagel; Ashlyn Dixon; Ruijun Zhang; Emmanuel Walter; Robert Parks; John Whitesides; Dawn J Marshall; Kwan-Ki Hwang; Yi Yang; Xi Chen; Feng Gao; Supriya Munshaw; Thomas B Kepler; Thomas Denny; M Anthony Moody; Barton F Haynes
Journal:  J Virol Methods       Date:  2009-02-21       Impact factor: 2.014

4.  Prevention of overfitting in cryo-EM structure determination.

Authors:  Sjors H W Scheres; Shaoxia Chen
Journal:  Nat Methods       Date:  2012-09       Impact factor: 28.547

5.  Innate immune recognition of glycans targets HIV nanoparticle immunogens to germinal centers.

Authors:  Talar Tokatlian; Benjamin J Read; Christopher A Jones; Daniel W Kulp; Sergey Menis; Jason Y H Chang; Jon M Steichen; Sudha Kumari; Joel D Allen; Eric L Dane; Alessia Liguori; Maya Sangesland; Daniel Lingwood; Max Crispin; William R Schief; Darrell J Irvine
Journal:  Science       Date:  2018-12-20       Impact factor: 47.728

Review 6.  Molecular mechanisms of antibody somatic hypermutation.

Authors:  Javier M Di Noia; Michael S Neuberger
Journal:  Annu Rev Biochem       Date:  2007       Impact factor: 23.643

7.  Receptor editing in self-reactive bone marrow B cells.

Authors:  S L Tiegs; D M Russell; D Nemazee
Journal:  J Exp Med       Date:  1993-04-01       Impact factor: 14.307

8.  Crystal structure, conformational fixation and entry-related interactions of mature ligand-free HIV-1 Env.

Authors:  Young Do Kwon; Marie Pancera; Priyamvada Acharya; Ivelin S Georgiev; Emma T Crooks; Jason Gorman; M Gordon Joyce; Miklos Guttman; Xiaochu Ma; Sandeep Narpala; Cinque Soto; Daniel S Terry; Yongping Yang; Tongqing Zhou; Goran Ahlsen; Robert T Bailer; Michael Chambers; Gwo-Yu Chuang; Nicole A Doria-Rose; Aliaksandr Druz; Mark A Hallen; Adam Harned; Tatsiana Kirys; Mark K Louder; Sijy O'Dell; Gilad Ofek; Keiko Osawa; Madhu Prabhakaran; Mallika Sastry; Guillaume B E Stewart-Jones; Jonathan Stuckey; Paul V Thomas; Tishina Tittley; Constance Williams; Baoshan Zhang; Hong Zhao; Zhou Zhou; Bruce R Donald; Lawrence K Lee; Susan Zolla-Pazner; Ulrich Baxa; Arne Schön; Ernesto Freire; Lawrence Shapiro; Kelly K Lee; James Arthos; James B Munro; Scott C Blanchard; Walther Mothes; James M Binley; Adrian B McDermott; John R Mascola; Peter D Kwong
Journal:  Nat Struct Mol Biol       Date:  2015-06-22       Impact factor: 15.369

9.  Induction of HIV Neutralizing Antibody Lineages in Mice with Diverse Precursor Repertoires.

Authors:  Ming Tian; Cheng Cheng; Xuejun Chen; Hongying Duan; Hwei-Ling Cheng; Mai Dao; Zizhang Sheng; Michael Kimble; Lingshu Wang; Sherry Lin; Stephen D Schmidt; Zhou Du; M Gordon Joyce; Yiwei Chen; Brandon J DeKosky; Yimin Chen; Erica Normandin; Elizabeth Cantor; Rita E Chen; Nicole A Doria-Rose; Yi Zhang; Wei Shi; Wing-Pui Kong; Misook Choe; Amy R Henry; Farida Laboune; Ivelin S Georgiev; Pei-Yi Huang; Suvi Jain; Andrew T McGuire; Eric Georgeson; Sergey Menis; Daniel C Douek; William R Schief; Leonidas Stamatatos; Peter D Kwong; Lawrence Shapiro; Barton F Haynes; John R Mascola; Frederick W Alt
Journal:  Cell       Date:  2016-09-08       Impact factor: 41.582

10.  Reconstructing a B-cell clonal lineage. I. Statistical inference of unobserved ancestors.

Authors:  Thomas B Kepler
Journal:  F1000Res       Date:  2013-04-03
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  53 in total

1.  Mutational fitness landscapes reveal genetic and structural improvement pathways for a vaccine-elicited HIV-1 broadly neutralizing antibody.

Authors:  Bharat Madan; Baoshan Zhang; Kai Xu; Cara W Chao; Sijy O'Dell; Jacy R Wolfe; Gwo-Yu Chuang; Ahmed S Fahad; Hui Geng; Rui Kong; Mark K Louder; Thuy Duong Nguyen; Reda Rawi; Arne Schön; Zizhang Sheng; Rajani Nimrania; Yiran Wang; Tongqing Zhou; Bob C Lin; Nicole A Doria-Rose; Lawrence Shapiro; Peter D Kwong; Brandon J DeKosky
Journal:  Proc Natl Acad Sci U S A       Date:  2021-03-09       Impact factor: 11.205

Review 2.  Rationalizing Random Walks: Replicating Protective Antibody Trajectories.

Authors:  Jennifer L Remmel; Margaret E Ackerman
Journal:  Trends Immunol       Date:  2021-01-26       Impact factor: 16.687

3.  VRC34-Antibody Lineage Development Reveals How a Required Rare Mutation Shapes the Maturation of a Broad HIV-Neutralizing Lineage.

Authors:  Chen-Hsiang Shen; Brandon J DeKosky; Yicheng Guo; Kai Xu; Ying Gu; Divya Kilam; Sung Hee Ko; Rui Kong; Kevin Liu; Mark K Louder; Li Ou; Baoshan Zhang; Cara W Chao; Martin M Corcoran; Eric Feng; Jesse Huang; Erica Normandin; Sijy O'Dell; Amy Ransier; Reda Rawi; Mallika Sastry; Stephen D Schmidt; Shuishu Wang; Yiran Wang; Gwo-Yu Chuang; Nicole A Doria-Rose; Bob Lin; Tongqing Zhou; Eli A Boritz; Mark Connors; Daniel C Douek; Gunilla B Karlsson Hedestam; Zizhang Sheng; Lawrence Shapiro; John R Mascola; Peter D Kwong
Journal:  Cell Host Microbe       Date:  2020-03-03       Impact factor: 21.023

4.  A Rare Mutation in an Infant-Derived HIV-1 Envelope Glycoprotein Alters Interprotomer Stability and Susceptibility to Broadly Neutralizing Antibodies Targeting the Trimer Apex.

Authors:  Nitesh Mishra; Shaifali Sharma; Ayushman Dobhal; Sanjeev Kumar; Himanshi Chawla; Ravinder Singh; Bimal Kumar Das; Sushil Kumar Kabra; Rakesh Lodha; Kalpana Luthra
Journal:  J Virol       Date:  2020-09-15       Impact factor: 5.103

Review 5.  Targeting the N332-supersite of the HIV-1 envelope for vaccine design.

Authors:  Thandeka Moyo; Dale Kitchin; Penny L Moore
Journal:  Expert Opin Ther Targets       Date:  2020-04-27       Impact factor: 6.902

6.  Polyfunctional Tier 2-Neutralizing Antibodies Cloned following HIV-1 Env Macaque Immunization Mirror Native Antibodies in a Human Donor.

Authors:  David A Spencer; Delphine C Malherbe; Néstor Vázquez Bernat; Monika Ádori; Benjamin Goldberg; Nicholas Dambrauskas; Heidi Henderson; Shilpi Pandey; Tracy Cheever; Philip Barnette; William F Sutton; Margaret E Ackerman; James J Kobie; D Noah Sather; Gunilla B Karlsson Hedestam; Nancy L Haigwood; Ann J Hessell
Journal:  J Immunol       Date:  2021-01-20       Impact factor: 5.422

7.  Antigenicity and Immunogenicity of HIV-1 Envelope Trimers Complexed to a Small-Molecule Viral Entry Inhibitor.

Authors:  S Munir Alam; Kenneth Cronin; Robert Parks; Kara Anasti; Haitao Ding; Eden P Go; Heather Desaire; Amanda Eaton; David Montefiori; Joseph Sodroski; John Kappes; Barton F Haynes; Kevin O Saunders
Journal:  J Virol       Date:  2020-10-14       Impact factor: 5.103

8.  Fab-dimerized glycan-reactive antibodies are a structural category of natural antibodies.

Authors:  Wilton B Williams; R Ryan Meyerhoff; R J Edwards; Hui Li; Kartik Manne; Nathan I Nicely; Rory Henderson; Ye Zhou; Katarzyna Janowska; Katayoun Mansouri; Sophie Gobeil; Tyler Evangelous; Bhavna Hora; Madison Berry; A Yousef Abuahmad; Jordan Sprenz; Margaret Deyton; Victoria Stalls; Megan Kopp; Allen L Hsu; Mario J Borgnia; Guillaume B E Stewart-Jones; Matthew S Lee; Naomi Bronkema; M Anthony Moody; Kevin Wiehe; Todd Bradley; S Munir Alam; Robert J Parks; Andrew Foulger; Thomas Oguin; Gregory D Sempowski; Mattia Bonsignori; Celia C LaBranche; David C Montefiori; Michael Seaman; Sampa Santra; John Perfect; Joseph R Francica; Geoffrey M Lynn; Baptiste Aussedat; William E Walkowicz; Richard Laga; Garnett Kelsoe; Kevin O Saunders; Daniela Fera; Peter D Kwong; Robert A Seder; Alberto Bartesaghi; George M Shaw; Priyamvada Acharya; Barton F Haynes
Journal:  Cell       Date:  2021-05-20       Impact factor: 41.582

Review 9.  Eliciting B cell immunity against infectious diseases using nanovaccines.

Authors:  Ankur Singh
Journal:  Nat Nanotechnol       Date:  2020-11-16       Impact factor: 39.213

10.  Recapitulation of HIV-1 Env-antibody coevolution in macaques leading to neutralization breadth.

Authors:  Ryan S Roark; Hui Li; Wilton B Williams; Hema Chug; Rosemarie D Mason; Jason Gorman; Shuyi Wang; Fang-Hua Lee; Juliette Rando; Mattia Bonsignori; Kwan-Ki Hwang; Kevin O Saunders; Kevin Wiehe; M Anthony Moody; Peter T Hraber; Kshitij Wagh; Elena E Giorgi; Ronnie M Russell; Frederic Bibollet-Ruche; Weimin Liu; Jesse Connell; Andrew G Smith; Julia DeVoto; Alexander I Murphy; Jessica Smith; Wenge Ding; Chengyan Zhao; Neha Chohan; Maho Okumura; Christina Rosario; Yu Ding; Emily Lindemuth; Anya M Bauer; Katharine J Bar; David Ambrozak; Cara W Chao; Gwo-Yu Chuang; Hui Geng; Bob C Lin; Mark K Louder; Richard Nguyen; Baoshan Zhang; Mark G Lewis; Donald D Raymond; Nicole A Doria-Rose; Chaim A Schramm; Daniel C Douek; Mario Roederer; Thomas B Kepler; Garnett Kelsoe; John R Mascola; Peter D Kwong; Bette T Korber; Stephen C Harrison; Barton F Haynes; Beatrice H Hahn; George M Shaw
Journal:  Science       Date:  2020-11-19       Impact factor: 47.728

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