Literature DB >> 31804528

Computing the statistical significance of optimized communities in networks.

John Palowitch1.   

Abstract

In scientific problems involving systems that can be modeled as a network (or "graph"), it is often of interest to find network communities - strongly connected node subsets - for unsupervised learning, feature discovery, anomaly detection, or scientific study. The vast majority of community detection methods proceed via optimization of a quality function, which is possible even on random networks without communities. Therefore there is usually not an easy way to tell if a community is "significant", in this context meaning more internally connected than would be expected under a random graph model without communities. This paper generalizes existing null models and statistical tests for this purpose to bipartite graphs, and introduces a new significance scoring algorithm called Fast Optimized Community Significance (FOCS) that is highly scalable and agnostic to the type of graph. Compared with existing methods on unipartite graphs, FOCS is more numerically stable and better balances the trade-off between detection power and false positives. On a large-scale bipartite graph derived from the Internet Movie Database (IMDB), the significance scores provided by FOCS correlate strongly with meaningful actor/director collaborations on serial cinematic projects.

Entities:  

Year:  2019        PMID: 31804528      PMCID: PMC6895225          DOI: 10.1038/s41598-019-54708-8

Source DB:  PubMed          Journal:  Sci Rep        ISSN: 2045-2322            Impact factor:   4.379


  12 in total

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4.  Finding community structure in networks using the eigenvectors of matrices.

Authors:  M E J Newman
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5.  Modularity and community detection in bipartite networks.

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Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2007-12-07

6.  Benchmark graphs for testing community detection algorithms.

Authors:  Andrea Lancichinetti; Santo Fortunato; Filippo Radicchi
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2008-10-24

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Journal:  Proc Natl Acad Sci U S A       Date:  2011-04-18       Impact factor: 11.205

8.  Scalable detection of statistically significant communities and hierarchies, using message passing for modularity.

Authors:  Pan Zhang; Cristopher Moore
Journal:  Proc Natl Acad Sci U S A       Date:  2014-12-08       Impact factor: 11.205

9.  Mapping change in large networks.

Authors:  Martin Rosvall; Carl T Bergstrom
Journal:  PLoS One       Date:  2010-01-27       Impact factor: 3.240

10.  Finding statistically significant communities in networks.

Authors:  Andrea Lancichinetti; Filippo Radicchi; José J Ramasco; Santo Fortunato
Journal:  PLoS One       Date:  2011-04-29       Impact factor: 3.240

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  1 in total

1.  On the statistical significance of communities from weighted graphs.

Authors:  Zengyou He; Wenfang Chen; Xiaoqi Wei; Yan Liu
Journal:  Sci Rep       Date:  2021-10-13       Impact factor: 4.379

  1 in total

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