Literature DB >> 31803960

Dissecting the human immune system with single cell RNA sequencing technology.

Gang Xu1,2, Yang Liu1,2, Hanjie Li3, Lei Liu1,2, Shuye Zhang4, Zheng Zhang1,2,5.   

Abstract

Single-cell RNA sequencing (scRNA-seq) is a powerful new technology allowing the analysis of transcriptomes from individual cell and is ideally suited to dissect immune cell heterogeneity. ScRNA-seq has already been applied to identify novel immune cell subsets, elaborate cellular differentiation trajectories, and elucidate immunopathogenic mechanisms. Here, we briefly discuss the recent progresses and challenges in the scRNA-seq technology including the workflow, recent applications in immunology, and potential hurdles that need to be overcome. This review will highlight how single cell technology promotes our understanding of human immunology. ©2019 Society for Leukocyte Biology.

Entities:  

Keywords:  cell type identification; human immune system; single-cell RNA sequencing; trajectory inference

Year:  2019        PMID: 31803960     DOI: 10.1002/JLB.5MR1019-179R

Source DB:  PubMed          Journal:  J Leukoc Biol        ISSN: 0741-5400            Impact factor:   4.962


  6 in total

1.  Tocilizumab exerts anti-inflammatory activity in six critically ill COVID-19 patients: a retrospective analysis.

Authors:  Shen Qian; Jianghong An; Furong Qi; Ling Ye; Qiong Chen; Xunqi Liu; Lixin Xie; Guobao Li
Journal:  Ann Transl Med       Date:  2020-07

Review 2.  Full spectrum of vitamin D immunomodulation in multiple sclerosis: mechanisms and therapeutic implications.

Authors:  Manon Galoppin; Saniya Kari; Sasha Soldati; Arindam Pal; Manon Rival; Britta Engelhardt; Anne Astier; Eric Thouvenot
Journal:  Brain Commun       Date:  2022-06-30

Review 3.  A guide to interrogating immunometabolism.

Authors:  Kelsey Voss; Hanna S Hong; Jackie E Bader; Ayaka Sugiura; Costas A Lyssiotis; Jeffrey C Rathmell
Journal:  Nat Rev Immunol       Date:  2021-04-15       Impact factor: 108.555

Review 4.  Applications of single-cell sequencing for the field of otolaryngology: A contemporary review.

Authors:  Madeline P Pyle; Michael Hoa
Journal:  Laryngoscope Investig Otolaryngol       Date:  2020-04-27

5.  Tissue-specific transcriptional imprinting and heterogeneity in human innate lymphoid cells revealed by full-length single-cell RNA-sequencing.

Authors:  Luca Mazzurana; Paulo Czarnewski; Viktor Jonsson; Leif Wigge; Markus Ringnér; Teresa C Williams; Avinash Ravindran; Åsa K Björklund; Jesper Säfholm; Gunnar Nilsson; Sven-Erik Dahlén; Ann-Charlotte Orre; Mamdoh Al-Ameri; Charlotte Höög; Charlotte Hedin; Sylwester Szczegielniak; Sven Almer; Jenny Mjösberg
Journal:  Cell Res       Date:  2021-01-08       Impact factor: 46.297

Review 6.  Deubiquitinating Enzymes Orchestrate the Cancer Stem Cell-Immunosuppressive Niche Dialogue: New Perspectives and Therapeutic Potential.

Authors:  Jun-Nan Guo; Bai-Rong Xia; Shen-Hui Deng; Chang Yang; Ya-Nan Pi; Bin-Bin Cui; Wei-Lin Jin
Journal:  Front Cell Dev Biol       Date:  2021-06-09
  6 in total

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