Literature DB >> 31799216

A series of Notch3 mutations in CADASIL; insights from 3D molecular modelling and evolutionary analyses.

Dimitrios Vlachakis1, Spyridon Champeris Tsaniras2, Katerina Ioannidou3, Louis Papageorgiou1, Marc Baumann4, Sophia Kossida1.   

Abstract

CADASIL disease belongs to the group of rare diseases. It is well established that the Notch3 protein is primarily responsible for the development of CADASIL syndrome. Herein, we attempt to shed light to the actual molecular mechanism underlying CADASIL via insights that we have from preliminary in silico and proteomics studies on the Notch3 protein. At the moment, we are aware of a series of Notch3 point mutations that promote CADASIL. In this direction, we investigate the nature, extent, physicochemical and structural significance of the mutant species in an effort to identify the underlying mechanism of Notch3 role and implications in cell signal transduction. Overall, our in silico study has revealed a rather complex molecular mechanism of Notch3 on the structural level; depending of the nature and position of each mutation, a consensus significant loss of beta-sheet structure is observed throughout all in silico modeled mutant/wild type biological systems.

Entities:  

Year:  2014        PMID: 31799216      PMCID: PMC6887539     

Source DB:  PubMed          Journal:  J Mol Biochem        ISSN: 2241-0090


  46 in total

1.  GROMACS 4:  Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation.

Authors:  Berk Hess; Carsten Kutzner; David van der Spoel; Erik Lindahl
Journal:  J Chem Theory Comput       Date:  2008-03       Impact factor: 6.006

2.  Novel human pathological mutations. Gene symbol: NOTCH3. Disease: cerebral autosomal dominant arteriopathy with subcortical infarcts and leucoencephalopathy (CADASIL).

Authors:  Susana Ferreira; Cristina Costa; João Paulo Oliveira
Journal:  Hum Genet       Date:  2007-06       Impact factor: 4.132

Review 3.  Cell and molecular biology of Notch.

Authors:  Ulla-Maj Fiúza; Alfonso Martinez Arias
Journal:  J Endocrinol       Date:  2007-09       Impact factor: 4.286

4.  State-of-the-art technology in modern computer-aided drug design.

Authors:  Georgios A Dalkas; Dimitrios Vlachakis; Dimosthenis Tsagkrasoulis; Anastasia Kastania; Sophia Kossida
Journal:  Brief Bioinform       Date:  2012-11-12       Impact factor: 11.622

5.  GROMACS 4.5: a high-throughput and highly parallel open source molecular simulation toolkit.

Authors:  Sander Pronk; Szilárd Páll; Roland Schulz; Per Larsson; Pär Bjelkmar; Rossen Apostolov; Michael R Shirts; Jeremy C Smith; Peter M Kasson; David van der Spoel; Berk Hess; Erik Lindahl
Journal:  Bioinformatics       Date:  2013-02-13       Impact factor: 6.937

6.  Optimizing the stability of single-chain proteins by linker length and composition mutagenesis.

Authors:  C R Robinson; R T Sauer
Journal:  Proc Natl Acad Sci U S A       Date:  1998-05-26       Impact factor: 11.205

7.  Cerebral autosomal dominant arteriopathy with subcortical infarcts and leukoencephalopathy maps to chromosome 19q12.

Authors:  E Tournier-Lasserve; A Joutel; J Melki; J Weissenbach; G M Lathrop; H Chabriat; J L Mas; E A Cabanis; M Baudrimont; J Maciazek
Journal:  Nat Genet       Date:  1993-03       Impact factor: 38.330

8.  Cerebral autosomal dominant arteriopathy with subcortical infarcts and leucoencephalopathy (CADASIL): a rare cause of dementia.

Authors:  Thelma K Toni-Uebari
Journal:  BMJ Case Rep       Date:  2013-01-25

Review 9.  The molecular logic of Notch signaling--a structural and biochemical perspective.

Authors:  Wendy R Gordon; Kelly L Arnett; Stephen C Blacklow
Journal:  J Cell Sci       Date:  2008-10-01       Impact factor: 5.285

10.  3D Molecular Modelling Study of the H7N9 RNA-Dependent RNA Polymerase as an Emerging Pharmacological Target.

Authors:  Dimitrios Vlachakis; Argiro Karozou; Sophia Kossida
Journal:  Influenza Res Treat       Date:  2013-09-25
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  3 in total

1.  A novel cysteine-sparing G73A mutation of NOTCH3 in a Chinese CADASIL family.

Authors:  Liyan Huang; Wei Li; Yi Li; Chaoyuan Song; Pin Wang; Hongchun Wang; Xiulian Sun
Journal:  Neurogenetics       Date:  2019-11-13       Impact factor: 2.660

2.  NOTCH3 mutations in a cohort of Portuguese patients within CADASIL spectrum phenotype.

Authors:  Maria Rosário Almeida; Inês Elias; Carolina Fernandes; Rita Machado; Orlando Galego; Gustavo Santo
Journal:  Neurogenetics       Date:  2021-12-01       Impact factor: 2.660

3.  An updated evolutionary study of the Notch family reveals a new ancient origin and novel invariable motifs as potential pharmacological targets.

Authors:  Dimitrios Vlachakis; Louis Papageorgiou; Ariadne Papadaki; Maria Georga; Sofia Kossida; Elias Eliopoulos
Journal:  PeerJ       Date:  2020-11-05       Impact factor: 2.984

  3 in total

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