Literature DB >> 31798186

Genome size and lifestyle in gnesiotrochan rotifers.

Patrick D Brown1, Elizabeth J Walsh2.   

Abstract

Gnesiotrochan rotifers display a variety of life styles ranging from taxa with free-swimming larval and sessile adult stages to those with motile adult stages and colonial habits. Several explanations for the C- value enigma posits that genome size is correlated with lifestyle. To investigate this, 13 gnesiotrochan species representing nine genera were measured by flow cytometry. Genome sizes (1C) within Gnesiotrocha ranged from 0.05 pg (Hexarthra mira and Hexarthra fennica) to 0.25 pg (Sinantherina ariprepes). Genome sizes varied within genera and species; e.g., H. fennica (El Huérfano, Mexico) was estimated to be 15% larger than that of H. mira and H. fennica (Keystone Wetland, TX, USA). Gnesiotrochan genome sizes are similar to those reported within Ploima, which range from 0.06 pg (Brachionus rotundiformis, B. dimidiatus) to 0.46 pg (B. asplanchnoidis). Within Gnesiotrocha, genome size was found to be significantly smaller in sessile versus motile species as well as in solitary versus colonial species. To account for phylogenetic background, Linear Mixed Models with hierarchical taxonomic ranks showed that there is a taxonomic component underlying genome size. This study provides the first estimates of genome size within the superorder, providing a baseline for genomic and evolutionary studies within the group.

Entities:  

Keywords:  C-value; coloniality; flow cytometry; free-swimming; sessile

Year:  2019        PMID: 31798186      PMCID: PMC6886742          DOI: 10.1007/s10750-018-3873-8

Source DB:  PubMed          Journal:  Hydrobiologia        ISSN: 0018-8158            Impact factor:   2.694


  31 in total

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Review 2.  How zooplankton feed: mechanisms, traits and trade-offs.

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5.  Rotifers: exquisite metazoans.

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6.  Metabolic 'engines' of flight drive genome size reduction in birds.

Authors:  Natalie A Wright; T Ryan Gregory; Christopher C Witt
Journal:  Proc Biol Sci       Date:  2014-01-29       Impact factor: 5.349

7.  The genome of the freshwater monogonont rotifer Brachionus calyciflorus.

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Journal:  Mol Ecol Resour       Date:  2018-03-03       Impact factor: 7.090

8.  The evolution of intron size in amniotes: a role for powered flight?

Authors:  Qu Zhang; Scott V Edwards
Journal:  Genome Biol Evol       Date:  2012       Impact factor: 3.416

9.  Genome size in arthropods; different roles of phylogeny, habitat and life history in insects and crustaceans.

Authors:  Kristian Alfsnes; Hans Petter Leinaas; Dag Olav Hessen
Journal:  Ecol Evol       Date:  2017-06-22       Impact factor: 2.912

10.  Genome size analyses of Pucciniales reveal the largest fungal genomes.

Authors:  Sílvia Tavares; Ana Paula Ramos; Ana Sofia Pires; Helena G Azinheira; Patrícia Caldeirinha; Tobias Link; Rita Abranches; Maria do Céu Silva; Ralf T Voegele; João Loureiro; Pedro Talhinhas
Journal:  Front Plant Sci       Date:  2014-08-26       Impact factor: 5.753

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