Literature DB >> 31793292

Automated Osteosclerosis Grading of Clinical Biopsies Using Infrared Spectroscopic Imaging.

Rupali Mankar1, Carlos E Bueso-Ramos2, C Cameron Yin2, Juliana Elisa Hidalgo-Lopez2, Sebastian Berisha1, Mustafa Kansiz3, David Mayerich1.   

Abstract

Osteosclerosis and myefibrosis are complications of myeloproliferative neoplasms. These disorders result in excess growth of trabecular bone and collagen fibers that replace hematopoietic cells, resulting in abnormal bone marrow function. Treatments using imatinib and JAK2 pathway inhibitors can be effective on osteosclerosis and fibrosis; therefore, accurate grading is critical for tracking treatment effectiveness. Current grading standards use a four-class system based on analysis of biopsies stained with three histological stains: hematoxylin and eosin (H&E), Masson's trichrome, and reticulin. However, conventional grading can be subjective and imprecise, impacting the effectiveness of treatment. In this Article, we demonstrate that mid-infrared spectroscopic imaging may serve as a quantitative diagnostic tool for quantitatively tracking disease progression and response to treatment. The proposed approach is label-free and provides automated quantitative analysis of osteosclerosis and collagen fibrosis.

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Year:  2019        PMID: 31793292      PMCID: PMC7055712          DOI: 10.1021/acs.analchem.9b03015

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  28 in total

1.  Infrared spectroscopic imaging for histopathologic recognition.

Authors:  Daniel C Fernandez; Rohit Bhargava; Stephen M Hewitt; Ira W Levin
Journal:  Nat Biotechnol       Date:  2005-03-27       Impact factor: 54.908

Review 2.  Bone marrow fibrosis: pathophysiology and clinical significance of increased bone marrow stromal fibres.

Authors:  David J Kuter; Barbara Bain; Ghulam Mufti; Adam Bagg; Robert P Hasserjian
Journal:  Br J Haematol       Date:  2007-11       Impact factor: 6.998

3.  Selecting optimal features from Fourier transform infrared spectroscopy for discrete-frequency imaging.

Authors:  Rupali Mankar; Michael J Walsh; Rohit Bhargava; Saurabh Prasad; David Mayerich
Journal:  Analyst       Date:  2018-02-26       Impact factor: 4.616

Review 4.  Breast cancer histopathology image analysis: a review.

Authors:  Mitko Veta; Josien P W Pluim; Paul J van Diest; Max A Viergever
Journal:  IEEE Trans Biomed Eng       Date:  2014-05       Impact factor: 4.538

Review 5.  Infrared Spectroscopic Imaging Advances as an Analytical Technology for Biomedical Sciences.

Authors:  Tomasz P Wrobel; Rohit Bhargava
Journal:  Anal Chem       Date:  2018-02-06       Impact factor: 6.986

6.  Rapid infrared mapping for highly accurate automated histology in Barrett's oesophagus.

Authors:  O J Old; G R Lloyd; J Nallala; M Isabelle; L M Almond; N A Shepherd; C A Kendall; A C Shore; H Barr; N Stone
Journal:  Analyst       Date:  2017-04-10       Impact factor: 4.616

7.  Color standardization and optimization in whole slide imaging.

Authors:  Yukako Yagi
Journal:  Diagn Pathol       Date:  2011-03-30       Impact factor: 2.644

8.  Computer aided diagnostic tools aim to empower rather than replace pathologists: Lessons learned from computational chess.

Authors:  Jason Hipp; Thomas Flotte; James Monaco; Jerome Cheng; Anant Madabhushi; Yukako Yagi; Jaime Rodriguez-Canales; Michael Emmert-Buck; Michael C Dugan; Stephen Hewitt; Mehmet Toner; Ronald G Tompkins; David Lucas; John R Gilbertson; Ulysses J Balis
Journal:  J Pathol Inform       Date:  2011-06-14

Review 9.  Extracting knowledge from chemical imaging data using computational algorithms for digital cancer diagnosis.

Authors:  Saumya Tiwari; Rohit Bhargava
Journal:  Yale J Biol Med       Date:  2015-06-01

10.  Using Fourier transform IR spectroscopy to analyze biological materials.

Authors:  Matthew J Baker; Júlio Trevisan; Paul Bassan; Rohit Bhargava; Holly J Butler; Konrad M Dorling; Peter R Fielden; Simon W Fogarty; Nigel J Fullwood; Kelly A Heys; Caryn Hughes; Peter Lasch; Pierre L Martin-Hirsch; Blessing Obinaju; Ganesh D Sockalingum; Josep Sulé-Suso; Rebecca J Strong; Michael J Walsh; Bayden R Wood; Peter Gardner; Francis L Martin
Journal:  Nat Protoc       Date:  2014-07-03       Impact factor: 13.491

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  1 in total

Review 1.  Exosome mediated biological functions within skeletal microenvironment.

Authors:  Zhikun Wang; Zhonghan Zhao; Bo Gao; Lingli Zhang
Journal:  Front Bioeng Biotechnol       Date:  2022-07-22
  1 in total

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