Literature DB >> 31791006

Deep learning tools for the measurement of animal behavior in neuroscience.

Mackenzie Weygandt Mathis1, Alexander Mathis2.   

Abstract

Recent advances in computer vision have made accurate, fast and robust measurement of animal behavior a reality. In the past years powerful tools specifically designed to aid the measurement of behavior have come to fruition. Here we discuss how capturing the postures of animals-pose estimation - has been rapidly advancing with new deep learning methods. While challenges still remain, we envision that the fast-paced development of new deep learning tools will rapidly change the landscape of realizable real-world neuroscience. Published by Elsevier Ltd.

Entities:  

Year:  2019        PMID: 31791006     DOI: 10.1016/j.conb.2019.10.008

Source DB:  PubMed          Journal:  Curr Opin Neurobiol        ISSN: 0959-4388            Impact factor:   6.627


  48 in total

1.  Systems Neuroscience of Natural Behaviors in Rodents.

Authors:  Emily Jane Dennis; Ahmed El Hady; Angie Michaiel; Ann Clemens; Dougal R Gowan Tervo; Jakob Voigts; Sandeep Robert Datta
Journal:  J Neurosci       Date:  2020-12-18       Impact factor: 6.167

2.  Integrating XMALab and DeepLabCut for high-throughput XROMM.

Authors:  J D Laurence-Chasen; Armita R Manafzadeh; Nicholas G Hatsopoulos; Callum F Ross; Fritzie I Arce-McShane
Journal:  J Exp Biol       Date:  2020-09-04       Impact factor: 3.312

3.  Sniff-synchronized, gradient-guided olfactory search by freely moving mice.

Authors:  Teresa M Findley; David G Wyrick; Jennifer L Cramer; Morgan A Brown; Blake Holcomb; Robin Attey; Dorian Yeh; Eric Monasevitch; Nelly Nouboussi; Isabelle Cullen; Jeremea O Songco; Jared F King; Yashar Ahmadian; Matthew C Smear
Journal:  Elife       Date:  2021-05-04       Impact factor: 8.140

4.  Real-time, low-latency closed-loop feedback using markerless posture tracking.

Authors:  Gary A Kane; Gonçalo Lopes; Jonny L Saunders; Alexander Mathis; Mackenzie W Mathis
Journal:  Elife       Date:  2020-12-08       Impact factor: 8.140

5.  Distinct temporal difference error signals in dopamine axons in three regions of the striatum in a decision-making task.

Authors:  Iku Tsutsui-Kimura; Hideyuki Matsumoto; Korleki Akiti; Melissa M Yamada; Naoshige Uchida; Mitsuko Watabe-Uchida
Journal:  Elife       Date:  2020-12-21       Impact factor: 8.140

Review 6.  Neural circuits regulating prosocial behaviors.

Authors:  Jessica J Walsh; Daniel J Christoffel; Robert C Malenka
Journal:  Neuropsychopharmacology       Date:  2022-06-14       Impact factor: 7.853

7.  Functional coupling between target selection and acquisition in the superior colliculus.

Authors:  Jaclyn Essig; Gidon Felsen
Journal:  J Neurophysiol       Date:  2021-09-22       Impact factor: 2.714

8.  In Silico: Where Next?

Authors:  Adrienne L Fairhall
Journal:  eNeuro       Date:  2021-04-30

9.  Optogenetic and thermogenetic manipulation of defined neural circuits and behaviors in Drosophila.

Authors:  Takato Honda
Journal:  Learn Mem       Date:  2022-03-24       Impact factor: 2.460

10.  Deep learning-based pose estimation for African ungulates in zoos.

Authors:  Max Hahn-Klimroth; Tobias Kapetanopoulos; Jennifer Gübert; Paul Wilhelm Dierkes
Journal:  Ecol Evol       Date:  2021-05-04       Impact factor: 2.912

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