| Literature DB >> 31784537 |
Yinan Zhang1,2, Fei Wang1, Jie Chao3, Mo Xie2, Huajie Liu4, Muchen Pan2, Enzo Kopperger5, Xiaoguo Liu1, Qian Li1, Jiye Shi2, Lihua Wang2,6, Jun Hu2,7, Lianhui Wang3, Friedrich C Simmel5, Chunhai Fan8.
Abstract
Biomolecular cryptography exploiting specific biomolecular interactions for data encryption represents a unique approach for information security. However, constructing protocols based on biomolecular reactions to guarantee confidentiality, integrity and availability (CIA) of information remains a challenge. Here we develop DNA origami cryptography (DOC) that exploits folding of a M13 viral scaffold into nanometer-scale self-assembled braille-like patterns for secure communication, which can create a key with a size of over 700 bits. The intrinsic nanoscale addressability of DNA origami additionally allows for protein binding-based steganography, which further protects message confidentiality in DOC. The integrity of a transmitted message can be ensured by establishing specific linkages between several DNA origamis carrying parts of the message. The versatility of DOC is further demonstrated by transmitting various data formats including text, musical notes and images, supporting its great potential for meeting the rapidly increasing CIA demands of next-generation cryptography.Entities:
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Year: 2019 PMID: 31784537 PMCID: PMC6884444 DOI: 10.1038/s41467-019-13517-3
Source DB: PubMed Journal: Nat Commun ISSN: 2041-1723 Impact factor: 14.919
Fig. 1Security protocol of DOC for message confidentiality. a The whole process is composed of three layers—encryption of the message into a spot pattern as the outer layer, followed by a steganographic intermediate layer, and finally DNA origami encryption (DOE) as the innermost layer, represented by three nested channels colored in gray, green and pale green, respectively. b Encryption of the message by Alice. Alice holds the DNA scaffold and can generate the M-strands. At first, Alice encoded the plaintext message “HEY” letter by letter into binary numbers, and then encrypted the numbers for each letter (in navy) and their respective positions in the message (in teal) into a braille-like spot pattern. Afterward, Alice encrypted the patterns into a combination of scaffold strands carrying several M-strands, according to a defined DNA origami folding scheme. c Decryption of the message by Bob. Bob holds streptavidin and can generate the staples. With the staples Bob was able to fold the DNA origami, revealing biotinylated patterns on the M-strands. Subsequently, Bob added streptavidin to make the patterns recognizable under the AFM. Finally, the plaintext message was decrypted letter by letter into binary numbers and decoded. d The fluorescent pattern under the STORM. Scale bar: 50 nm. e Braille-like streptavidin patterns under the AFM. Scale bar: 50 nm.
Fig. 2An eight-letter text communication. a Spot patterns for encryption of the text. Generation of key space in the pattern encryption (b) and DNA origami encryption (c). d AFM images of streptavidin patterns conveying the encrypted message. Major streptavidin patterns with each position number were circled in different colors. Scale bar: 200 nm (inset: 50 nm).
Fig. 3Maintaining the integrity of message and achieving differentiated access. a Presentation of the message with a spot pattern. Hash value and password protection were introduced. b The England and France maps depicted on E- and F-tiles are fabricated with DNA dumbbell-shaped bulge loops on selected staples, respectively. c Transmitting process of the message. Hash value is used to verify the integrity of message. Bob has access to the genuine message while Mallory is led to the bait one. Scale bar: 50 nm.
Fig. 4Transmitting music and image with DOC. a The custom keypad indexing the music to binary numbers. b From spot pattern to music. c AFM images of streptavidin patterns conveying the music. (d) A 256-pixel panda image. The pixel boxed in orange is presented by a spot pattern (an analogic map of China). (e) 256 streptavidin patterns conveying the panda. Scale bar: 50 nm.