| Literature DB >> 31773817 |
Rajan Kashyap1,2, Sagarika Bhattacharjee3, B T Thomas Yeo2,4,5,6, S H Annabel Chen1,3,7.
Abstract
Patterns in resting-state fMRI (rs-fMRI) are widely used to characterize the trait effects of brain function. In this aspect, multiple rs-fMRI scans from single subjects can provide interesting clues about the rs-fMRI patterns, though scan-to-scan variability pose challenges. Therefore, rs-fMRI's are either concatenated or the functional connectivity is averaged. This leads to loss of information. Here, we use an alternative way to extract the rs-fMRI features that are common across all the scans by applying common-and-orthogonal-basis-extraction (COBE) technique. To address this, we employed rs-fMRI of 788 subjects from the human connectome project and estimated the common-COBE-component of each subject from the four rs-fMRI runs. Since the common-COBE-component is specific to a subject, the pattern was used to classify the subjects based on the similarity/dissimilarity of the features. The subset of subjects (n = 107) with maximal-COBE-dissimilarity (MCD) was extracted and the remaining subjects (n = 681) formed the COBE-similarity (CS) group. The distribution of weights of the common-COBE-component for the two groups across rs-fMRI networks and subcortical regions was evaluated. We found the weights in the default mode network to be lower in the MCD compared to the CS. We compared the scores of 69 behavioral measures and found six behaviors related to the use of marijuana, illicit drugs, alcohol, and tobacco; and including a measure of antisocial personality to differentiate the two groups. Gender differences were also significant. Altogether the findings suggested that subtypes exist even in healthy control population, and comparison studies (case vs. control) need to be mindful of it.Entities:
Keywords: alcohol; antisocial personality problems; common component; default mode network; drugs; functional MRI; marijuana; tobacco, gender effects
Year: 2019 PMID: 31773817 PMCID: PMC7267929 DOI: 10.1002/hbm.24873
Source DB: PubMed Journal: Hum Brain Mapp ISSN: 1065-9471 Impact factor: 5.038
Figure 1Illustration of common orthogonal basis extraction (COBE). (a) COBE applied to the four runs of rs‐fMRI of an HCP subject. COBE projects the rs‐fMRI run of a HCP subject onto a common subspace () and run‐specific subspace (. The common component () is shared across all runs. The number of components C spanning the common subspace (i.e., the number of columns of ) is a user‐specified parameter. (b) The spatial map of the weights of the common component (419 x C) for C = 1 across the cortical areas is shown for a random HCP subject
Figure 2Spatial distribution of common common orthogonal basis extraction (COBE) component (C = 1) across the cortical and subcortical areas. (a) 400 cortical parcels (Schaefer et al., 2018). Parcel colors correspond to 17 large‐scale‐networks (Yeo et al., 2011). The 17 networks are a subdivision of seven networks (temporal parietal, default mode, control, limbic, attention, somato‐motor, and visual). (b) Nineteen subcortical ROIs (Fischl et al., 2002). (c) Spatial distribution of weights of the first common COBE component of 788 subjects across the 7 networks (in both hemispheres) and 19 subcortical areas. Most subjects show higher weights in the default mode network areas, though in few subjects the distribution of weight is different
Figure 3Differences in weight of common component across the default mode network areas between the MCD and CS group. (a) Higher weights of common COBE component can be observed in the Posterior cingulate cortex for the CS group. (b) The averaged weights of common COBE component across the 17 cortical networks (Yeo et al., 2011) and subcortical areas is shown for the two groups. * Represents the network that survived Bonferroni correction (p < 1). Clearly, the MCD group has reduced weights in the DMN‐A. (COBE, common orthogonal basis extraction; CS, COBE‐similarity; MCD, maximal‐COBE‐dissimilarity)
Figure 4Comparison of behavioral measures between MCD and CS group for the use of (a) alcohol (b) tobacco (c) marijuana, and (d) illicit drugs; and for (e) antisocial personality problems