| Literature DB >> 31765423 |
Heesoon Sheen1, Wook Kim1, Byung Hyun Byun2, Chang-Bae Kong3, Won Seok Song3, Wan Hyeong Cho3, Ilhan Lim2, Sang Moo Lim2, Sang-Keun Woo1.
Abstract
BACKGROUND: Osteosarcoma (OS) is the most common primary bone tumor affecting humans and it has extreme heterogeneity. Despite modern therapy, it recurs in approximately 30-40% of patients initially diagnosed with no metastatic disease, with the long-term survival rates of patients with recurrent OS being generally 20%. Thus, early prediction of metastases in OS management plans is crucial for better-adapted treatments and survival rates. In this study, a radiomics model for metastasis risk prediction in OS was developed and evaluated using metabolic imaging phenotypes. METHODS ANDEntities:
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Year: 2019 PMID: 31765423 PMCID: PMC6876771 DOI: 10.1371/journal.pone.0225242
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Patient characteristics.
| Characteristics | Value |
|---|---|
| Sex, n (%) | |
| Female | 23 (27.71%) |
| Male | 60 (72.29%) |
| Age, n (%) | |
| years ≤ 19 | 67 (80.72%) |
| years >19 | 16 (19.27%) |
| Location of primary tumor, n (%) | |
| Humerus | 4 (4.82%) |
| Radius | 2 (2.41%) |
| Femur | 44 (53.01%) |
| Fibula | 3 (3.61%) |
| Tibia | 30 (36.14%) |
| AJCC stage, n (%) | |
| IIA | 35 (42.2%) |
| IIB | 48 (57.8%) |
| Pathologic subtype, n (%) | |
| OB (Osteoblastic) | 60 (72.29%) |
| CB (Chorndroblastic) | 9 (10.84%) |
| FB (Fibroblastic) | 7 (8.43%) |
| Others | 7 (8.43%) |
Characteristics of clinical outcomes.
| Clinical outcomes | Total Number (n) | 83 (100%) |
| Histologic response | Good | 39 (46.99%) |
| Metastasis | Poor | 44 (53.01%) |
| No | 61 (73.49%) | |
| Yes | 22 (26.51%) | |
| Histologic response | Good-MetaFree | 34 (40.96%) |
| Poor-MetaFree | 27 (32.53%) | |
| Good-Meta | 5 (6.02%) | |
| Poor-Meta | 17 (20.48%) |
18F-FDG PET/CT Imaging Data
Summary of the first-order, second-order, and high-order features index.
| Order of extracted feature | Matrix | Index | Type |
|---|---|---|---|
| First order | Conventional features |
SUVmin (minimum SUV) SUVmax SUVpeak SUVmean TLG | Global |
| Histogram features |
Skewness Kurtosis Entropy_log10 Entropy_log2 Energy | ||
| Shape features |
Sphericity Compacity Volume (MTV) | ||
| Second order | GLCM |
Homogeneity Energy Correlation Contrast Entropy Dissimilarity | Regional |
| GLRLM |
SRE (short-run emphasis) LRE (long-run emphasis) LGRE (low grey-level run emphasis) HGRE (high grey-level run emphasis) SRLGE (short-run low grey-level emphasis) SRHGE (short-run high grey-level emphasis) LRLGE (long-run low grey-level) LRHGE (long-run high grey-level emphasis) GLNUr (grey-level non-uniformity for run) RLNU (run-length non-uniformity) RP (run percentage) | Regional | |
| High order | NGLDM |
Coarseness Contrast Busyness | Local |
| GLZLM |
SZE (short-zone emphasis) LZE (long-zone emphasis) LGZE (low grey-level zone emphasis) HGZE (high grey-level zone emphasis) SZLGE (short-zone low grey-level emphasis) SZHGE (short-zone high grey-level emphasis) LZLGE (long-zone low grey-level emphasis) LZHGE (long-zone high grey-level emphasis) GLNUz (grey-level nonuniformity for zone) ZLNU (zone length non-uniformity) ZP (zone percentage) | Local | |
Fig 1Spearman rank correlation of radiomics features in the training dataset.
Forty-five features were extracted from tumor volumes in eighty-three patients. Across all tumors, the correlation of each feature with all other features was investigated via Spearman’s rank correlation. The color and size of the circle indicate the degree of correlation. The final radiomics features were decided based on Spearman’s correlation coefficient >0.9 and significant p-value >0.01 after Holm-Bonferroni correction.
Radiomics features decided by Spearman’s rank correlation and backward stepwise elimination for use in multivariable regression analysis.
| Classification of matrix | Features selected by Spearman’s correlation | Features selected by(Spearman’s correlation+backward stepwise elimination) |
|---|---|---|
| Conventional Indices |
SUVmax MTV |
SUVmax |
| Indices based on intensity histogram |
Skewness | |
| Indices based on shape |
Sphericity | |
| GLCM based on gray level co-occurrence matrix |
Correlation | |
| NGLDM based on gray level neighborhood matrix |
Contrast Busyness | |
| GLRLM based on gray level homogeneous run size matrix |
GLNU | |
| GLZLM based on gray level homogeneous zone size matrix |
SZLGE |
SZLGE |
Evaluation results of two radiomics features for use in multivariable regression analysis.
The determined radiomic features were evaluated using ANOVA test, Odds ratio, varImp, and VIF. The results show that they are valid.
| Classification of matrix | Index | ANOVA test | Odds Ratio (95% CI) | varImp | VIF |
|---|---|---|---|---|---|
| Conventional Indices | SUVmax | 0.047 | 4.64 (1.03 to 20.97) | 1.99 | 3.98 |
| GLZLM | SZLGE | 0.009 | 5.34 (1.38 to 20.73) | 2.42 | 3.98 |
Fig 2ROC curve for two radiomics features tested using the test dataset: SUVmax + GLZLM_SZLGE.
The value shows that the classification based on texture analysis has good predictive value, as the area under the ROC curve is 0.80.
Estimation results of the predictive multivariable logistic model using the test dataset.
AUV, accuracy, and specificity are good values while sensitivity is a fair value.
| Predictive multivariable logistic model | probability of metastasis, | |||
|---|---|---|---|---|
| Z = -1.23 + 1.53*SUVmax + 1.68*GLZLM_SZLGE | ||||
| Estimation item | AUC | Accuracy | Sensitivity | Specificity |
| Results | 0.80 | 0.81 | 0.63 | 0.88 |
Fig 3Histogram of the averaged z-scores of SUVmax and GLZLM-SZLGE for the historic response prognosis and metastasis.
Regardless of historic response outcome, GLZLM-SZLGE presents positive value for the metastasis patient group, while it shows negative value for the metastasis free patient group. SUVmax has no related tendency.