Literature DB >> 31763353

Stochastic tissue window normalization of deep learning on computed tomography.

Yuankai Huo1, Yucheng Tang1, Yunqiang Chen2, Dashan Gao2, Shizhong Han2, Shunxing Bao1, Smita De3, James G Terry4, Jeffrey J Carr4, Richard G Abramson4, Bennett A Landman1,4.   

Abstract

Tissue window filtering has been widely used in deep learning for computed tomography (CT) image analyses to improve training performance (e.g., soft tissue windows for abdominal CT). However, the effectiveness of tissue window normalization is questionable since the generalizability of the trained model might be further harmed, especially when such models are applied to new cohorts with different CT reconstruction kernels, contrast mechanisms, dynamic variations in the acquisition, and physiological changes. We evaluate the effectiveness of both with and without using soft tissue window normalization on multisite CT cohorts. Moreover, we propose a stochastic tissue window normalization (SWN) method to improve the generalizability of tissue window normalization. Different from the random sampling, the SWN method centers the randomization around the soft tissue window to maintain the specificity for abdominal organs. To evaluate the performance of different strategies, 80 training and 453 validation and testing scans from six datasets are employed to perform multiorgan segmentation using standard 2D U-Net. The six datasets cover the scenarios, where the training and testing scans are from (1) same scanner and same population, (2) same CT contrast but different pathology, and (3) different CT contrast and pathology. The traditional soft tissue window and nonwindowed approaches achieved better performance on (1). The proposed SWN achieved general superior performance on (2) and (3) with statistical analyses, which offers better generalizability for a trained model.
© 2019 Society of Photo-Optical Instrumentation Engineers (SPIE).

Keywords:  computed tomography; deep learning; segmentation; tissue window

Year:  2019        PMID: 31763353      PMCID: PMC6863984          DOI: 10.1117/1.JMI.6.4.044005

Source DB:  PubMed          Journal:  J Med Imaging (Bellingham)        ISSN: 2329-4302


  5 in total

1.  Liver and bone window settings for soft-copy interpretation of chest and abdominal CT.

Authors:  S M Pomerantz; C S White; T L Krebs; B Daly; S A Sukumar; F Hooper; E L Siegel
Journal:  AJR Am J Roentgenol       Date:  2000-02       Impact factor: 3.959

2.  Splenomegaly Segmentation on Multi-Modal MRI Using Deep Convolutional Networks.

Authors:  Yuankai Huo; Zhoubing Xu; Shunxing Bao; Camilo Bermudez; Hyeonsoo Moon; Prasanna Parvathaneni; Tamara K Moyo; Michael R Savona; Albert Assad; Richard G Abramson; Bennett A Landman
Journal:  IEEE Trans Med Imaging       Date:  2018-11-13       Impact factor: 10.048

Review 3.  Review of the Diabetes Heart Study (DHS) family of studies: a comprehensively examined sample for genetic and epidemiological studies of type 2 diabetes and its complications.

Authors:  Donald W Bowden; Amanda J Cox; Barry I Freedman; Christina E Hugenschimdt; Lynne E Wagenknecht; David Herrington; Subhashish Agarwal; Thomas C Register; Joseph A Maldjian; Maggie C-Y Ng; Fang-Chi Hsu; Carl D Langefeld; Jeff D Williamson; J Jeffrey Carr
Journal:  Rev Diabet Stud       Date:  2010-11-10

4.  The value of "liver windows" settings in the detection of small renal cell carcinomas on unenhanced computed tomography.

Authors:  Kamal Sahi; Stuart Jackson; Edward Wiebe; Gavin Armstrong; Sean Winters; Ronald Moore; Gavin Low
Journal:  Can Assoc Radiol J       Date:  2013-05-22       Impact factor: 2.248

5.  Pixel-Level Deep Segmentation: Artificial Intelligence Quantifies Muscle on Computed Tomography for Body Morphometric Analysis.

Authors:  Hyunkwang Lee; Fabian M Troschel; Shahein Tajmir; Georg Fuchs; Julia Mario; Florian J Fintelmann; Synho Do
Journal:  J Digit Imaging       Date:  2017-08       Impact factor: 4.056

  5 in total
  1 in total

1.  Phase identification for dynamic CT enhancements with generative adversarial network.

Authors:  Yucheng Tang; Riqiang Gao; Ho Hin Lee; Yunqiang Chen; Dashan Gao; Camilo Bermudez; Shunxing Bao; Yuankai Huo; Brent V Savoie; Bennett A Landman
Journal:  Med Phys       Date:  2021-01-27       Impact factor: 4.506

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.