Literature DB >> 31762534

Coronary Calcium Detection using 3D Attention Identical Dual Deep Network Based on Weakly Supervised Learning.

Yuankai Huo1, James G Terry2, Jiachen Wang1, Vishwesh Nath1, Camilo Bermudez3, Shunxing Bao1, Prasanna Parvathaneni1, J Jeffery Carr2,4,5, Bennett A Landman1,2,3,6.   

Abstract

Coronary artery calcium (CAC) is biomarker of advanced subclinical coronary artery disease and predicts myocardial infarction and death prior to age 60 years. The slice-wise manual delineation has been regarded as the gold standard of coronary calcium detection. However, manual efforts are time and resource consuming and even impracticable to be applied on large-scale cohorts. In this paper, we propose the attention identical dual network (AID-Net) to perform CAC detection using scan-rescan longitudinal non-contrast CT scans with weakly supervised attention by only using per scan level labels. To leverage the performance, 3D attention mechanisms were integrated into the AID-Net to provide complementary information for classification tasks. Moreover, the 3D Gradient-weighted Class Activation Mapping (Grad-CAM) was also proposed at the testing stage to interpret the behaviors of the deep neural network. 5075 non-contrast chest CT scans were used as training, validation and testing datasets. Baseline performance was assessed on the same cohort. From the results, the proposed AID-Net achieved the superior performance on classification accuracy (0.9272) and AUC (0.9627).

Entities:  

Keywords:  3D grad-cam; AID-Net; CAC; attention; coronary artery calcium

Year:  2019        PMID: 31762534      PMCID: PMC6874228          DOI: 10.1117/12.2512541

Source DB:  PubMed          Journal:  Proc SPIE Int Soc Opt Eng        ISSN: 0277-786X


  8 in total

1.  Quantification of coronary artery calcium using ultrafast computed tomography.

Authors:  A S Agatston; W R Janowitz; F J Hildner; N R Zusmer; M Viamonte; R Detrano
Journal:  J Am Coll Cardiol       Date:  1990-03-15       Impact factor: 24.094

2.  Splenomegaly Segmentation using Global Convolutional Kernels and Conditional Generative Adversarial Networks.

Authors:  Yuankai Huo; Zhoubing Xu; Shunxing Bao; Camilo Bermudez; Andrew J Plassard; Jiaqi Liu; Yuang Yao; Albert Assad; Richard G Abramson; Bennett A Landman
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2018-03

3.  Automatic Calcium Scoring in Low-Dose Chest CT Using Deep Neural Networks With Dilated Convolutions.

Authors:  Nikolas Lessmann; Bram van Ginneken; Majd Zreik; Pim A de Jong; Bob D de Vos; Max A Viergever; Ivana Isgum
Journal:  IEEE Trans Med Imaging       Date:  2018-02       Impact factor: 10.048

4.  Evaluate the Malignancy of Pulmonary Nodules Using the 3-D Deep Leaky Noisy-OR Network.

Authors:  Fangzhou Liao; Ming Liang; Zhe Li; Xiaolin Hu; Sen Song
Journal:  IEEE Trans Neural Netw Learn Syst       Date:  2019-02-14       Impact factor: 10.451

5.  Automatic coronary calcium scoring in low-dose chest computed tomography.

Authors:  Ivana Isgum; Mathias Prokop; Meindert Niemeijer; Max A Viergever; Bram van Ginneken
Journal:  IEEE Trans Med Imaging       Date:  2012-09-03       Impact factor: 10.048

6.  Vessel specific coronary artery calcium scoring: an automatic system.

Authors:  Rahil Shahzad; Theo van Walsum; Michiel Schaap; Alexia Rossi; Stefan Klein; Annick C Weustink; Pim J de Feyter; Lucas J van Vliet; Wiro J Niessen
Journal:  Acad Radiol       Date:  2012-09-13       Impact factor: 3.173

7.  SynSeg-Net: Synthetic Segmentation Without Target Modality Ground Truth.

Authors:  Yuankai Huo; Zhoubing Xu; Hyeonsoo Moon; Shunxing Bao; Albert Assad; Tamara K Moyo; Michael R Savona; Richard G Abramson; Bennett A Landman
Journal:  IEEE Trans Med Imaging       Date:  2018-10-17       Impact factor: 10.048

8.  Association of Coronary Artery Calcium in Adults Aged 32 to 46 Years With Incident Coronary Heart Disease and Death.

Authors:  John Jeffrey Carr; David R Jacobs; James G Terry; Christina M Shay; Stephen Sidney; Kiang Liu; Pamela J Schreiner; Cora E Lewis; James M Shikany; Jared P Reis; David C Goff
Journal:  JAMA Cardiol       Date:  2017-04-01       Impact factor: 14.676

  8 in total
  5 in total

1.  Semi-supervised Machine Learning with MixMatch and Equivalence Classes.

Authors:  Colin B Hansen; Vishwesh Nath; Riqiang Gao; Camilo Bermudez; Yuankai Huo; Kim L Sandler; Pierre P Massion; Jeffrey D Blume; Thomas A Lasko; Bennett A Landman
Journal:  Lect Notes Monogr Ser       Date:  2020-10-02

2.  Deep convolutional neural networks to predict cardiovascular risk from computed tomography.

Authors:  Roman Zeleznik; Borek Foldyna; Parastou Eslami; Jakob Weiss; Ivanov Alexander; Jana Taron; Chintan Parmar; Raza M Alvi; Dahlia Banerji; Mio Uno; Yasuka Kikuchi; Julia Karady; Lili Zhang; Jan-Erik Scholtz; Thomas Mayrhofer; Asya Lyass; Taylor F Mahoney; Joseph M Massaro; Ramachandran S Vasan; Pamela S Douglas; Udo Hoffmann; Michael T Lu; Hugo J W L Aerts
Journal:  Nat Commun       Date:  2021-01-29       Impact factor: 14.919

3.  Semantic Cardiac Segmentation in Chest CT Images Using K-Means Clustering and the Mathematical Morphology Method.

Authors:  Beanbonyka Rim; Sungjin Lee; Ahyoung Lee; Hyo-Wook Gil; Min Hong
Journal:  Sensors (Basel)       Date:  2021-04-10       Impact factor: 3.576

4.  Using artificial intelligence in the development of diagnostic models of coronary artery disease with imaging markers: A scoping review.

Authors:  Xiao Wang; Junfeng Wang; Wenjun Wang; Mingxiang Zhu; Hua Guo; Junyu Ding; Jin Sun; Di Zhu; Yongjie Duan; Xu Chen; Peifang Zhang; Zhenzhou Wu; Kunlun He
Journal:  Front Cardiovasc Med       Date:  2022-10-04

5.  Molecular Image-Based Prediction Models of Nuclear Receptor Agonists and Antagonists Using the DeepSnap-Deep Learning Approach with the Tox21 10K Library.

Authors:  Yasunari Matsuzaka; Yoshihiro Uesawa
Journal:  Molecules       Date:  2020-06-15       Impact factor: 4.411

  5 in total

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