Literature DB >> 31751883

Recent advances in computational modeling of fibrin clot formation: A review.

Sumith Yesudasan1, Rodney D Averett2.   

Abstract

The field of thrombosis and hemostasis is crucial for understanding and developing new therapies for pathologies such as deep vein thrombosis, diabetes related strokes, pulmonary embolisms, and hemorrhaging related diseases. In the last two decades, an exponential growth in studies related to fibrin clot formation using computational tools has been observed. Despite this growth, the complete mechanism behind thrombus formation and hemostasis has been long and rife with obstacles; however, significant progress has been made in the present century. The computational models and methods used in this context are diversified into different spatiotemporal scales, yet there is no single model which can predict both physiological and mechanical properties of fibrin clots. In this review, we list the major strategies employed by researchers in modeling fibrin clot formation using recent and existing computational techniques. This review organizes the computational strategies into continuum level, system level, discrete particle (DPD), and multi-scale methods. We also discuss strengths and weaknesses of various methods and future directions in which computational modeling of fibrin clots can advance.
Copyright © 2019 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Fibrin clot modeling; Hemostasis; Mechanics; Multiscale modeling; Thrombosis

Mesh:

Substances:

Year:  2019        PMID: 31751883      PMCID: PMC6918949          DOI: 10.1016/j.compbiolchem.2019.107148

Source DB:  PubMed          Journal:  Comput Biol Chem        ISSN: 1476-9271            Impact factor:   2.877


  57 in total

1.  Blood coagulation dynamics: mathematical modeling and stability results.

Authors:  Adélia Sequeira; Rafael F Santos; Tomás Bodnár
Journal:  Math Biosci Eng       Date:  2011-04       Impact factor: 2.080

2.  Simulation of biological cell sorting using a two-dimensional extended Potts model.

Authors: 
Journal:  Phys Rev Lett       Date:  1992-09-28       Impact factor: 9.161

3.  A multiscale model of venous thrombus formation with surface-mediated control of blood coagulation cascade.

Authors:  Zhiliang Xu; Joshua Lioi; Jian Mu; Malgorzata M Kamocka; Xiaomin Liu; Danny Z Chen; Elliot D Rosen; Mark Alber
Journal:  Biophys J       Date:  2010-05-19       Impact factor: 4.033

4.  A model for the formation and lysis of blood clots.

Authors:  M Anand; K Rajagopal; K R Rajagopal
Journal:  Pathophysiol Haemost Thromb       Date:  2005

5.  Molecular basis of fibrin clot elasticity.

Authors:  Bernard B C Lim; Eric H Lee; Marcos Sotomayor; Klaus Schulten
Journal:  Structure       Date:  2008-02-21       Impact factor: 5.006

Review 6.  The coagulation cascade: initiation, maintenance, and regulation.

Authors:  E W Davie; K Fujikawa; W Kisiel
Journal:  Biochemistry       Date:  1991-10-29       Impact factor: 3.162

7.  A multiscale model of thrombus development.

Authors:  Zhiliang Xu; Nan Chen; Malgorzata M Kamocka; Elliot D Rosen; Mark Alber
Journal:  J R Soc Interface       Date:  2008-07-06       Impact factor: 4.118

Review 8.  Abnormal coagulation in the postoperative period contributing to excessive bleeding.

Authors:  R McKenna
Journal:  Med Clin North Am       Date:  2001-09       Impact factor: 5.456

Review 9.  A review of macroscopic thrombus modeling methods.

Authors:  Salvatore Cito; Marco Domenico Mazzeo; Lina Badimon
Journal:  Thromb Res       Date:  2012-12-20       Impact factor: 3.944

10.  Multi-Constituent Simulation of Thrombus Deposition.

Authors:  Wei-Tao Wu; Megan A Jamiolkowski; William R Wagner; Nadine Aubry; Mehrdad Massoudi; James F Antaki
Journal:  Sci Rep       Date:  2017-02-20       Impact factor: 4.379

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  8 in total

1.  Realistic computer modelling of stent retriever thrombectomy: a hybrid finite-element analysis-smoothed particle hydrodynamics model.

Authors:  S Mostafa Mousavi J S; Danial Faghihi; Kelsey Sommer; Mohammad M S Bhurwani; Tatsat R Patel; Briana Santo; Muhammad Waqas; Ciprian Ionita; Elad I Levy; Adnan H Siddiqui; Vincent M Tutino
Journal:  J R Soc Interface       Date:  2021-12-15       Impact factor: 4.118

2.  Computational Biomechanical Modeling of Fibrin Networks and Platelet-Fiber Network Interactions.

Authors:  Francesco Pancaldi; Oleg V Kim; John W Weisel; Mark Alber; Zhiliang Xu
Journal:  Curr Opin Biomed Eng       Date:  2022-02-17

3.  Computational Analysis of the Related Factors of Deep Vein Thrombosis (DVT) Formation in Patients Undergoing Hip Fracture Surgery.

Authors:  Yi Zhou; Huali Chen; Yan Zhang; Chao Yang; Xiaohui Yi; Shanshan Liu; Yao Zeng
Journal:  Evid Based Complement Alternat Med       Date:  2022-05-27       Impact factor: 2.650

4.  Models of Shear-Induced Platelet Activation and Numerical Implementation With Computational Fluid Dynamics Approaches.

Authors:  Dong Han; Jiafeng Zhang; Bartley P Griffith; Zhongjun J Wu
Journal:  J Biomech Eng       Date:  2022-04-01       Impact factor: 2.097

5.  Numerical modelling of blood rheology and platelet activation through a stenosed left coronary artery bifurcation.

Authors:  David G Owen; Diana C de Oliveira; Emma K Neale; Duncan E T Shepherd; Daniel M Espino
Journal:  PLoS One       Date:  2021-11-03       Impact factor: 3.240

6.  An Accelerated Thrombosis Model for Computational Fluid Dynamics Simulations in Rotary Blood Pumps.

Authors:  Christopher Blum; Sascha Groß-Hardt; Ulrich Steinseifer; Michael Neidlin
Journal:  Cardiovasc Eng Technol       Date:  2022-01-14       Impact factor: 2.305

Review 7.  Advances in Fibrin-Based Materials in Wound Repair: A Review.

Authors:  Ilker S Bayer
Journal:  Molecules       Date:  2022-07-14       Impact factor: 4.927

8.  Assessment of surface roughness and blood rheology on local coronary haemodynamics: a multi-scale computational fluid dynamics study.

Authors:  David G Owen; Torsten Schenkel; Duncan E T Shepherd; Daniel M Espino
Journal:  J R Soc Interface       Date:  2020-08-12       Impact factor: 4.118

  8 in total

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