Literature DB >> 31747616

Dynamic Transcriptome-Proteome Correlation Networks Reveal Human Myeloid Differentiation and Neutrophil-Specific Programming.

Arie J Hoogendijk1, Farzin Pourfarzad2, Cathelijn E M Aarts2, Anton T J Tool2, Ida H Hiemstra2, Luigi Grassi3, Mattia Frontini4, Alexander B Meijer5, Maartje van den Biggelaar1, Taco W Kuijpers6.   

Abstract

Human neutrophilic granulocytes form the largest pool of innate immune cells for host defense against bacterial and fungal pathogens. The dynamic changes that accompany the metamorphosis from a proliferating myeloid progenitor cell in the bone marrow into a mature non-dividing polymorphonuclear blood cell have remained poorly defined. Using mass spectrometry-based quantitative proteomics combined with transcriptomic data, we report on the dynamic changes of five developmental stages in the bone marrow and blood. Integration of transcriptomes and proteome unveils highly dynamic and differential interactions between RNA and protein kinetics during human neutrophil development, which can be linked to functional maturation of typical end-stage blood neutrophil killing activities.
Copyright © 2019 The Authors. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  granule proteins; granulopoiesis; neutrophil development; proteomics; transcriptomics

Mesh:

Substances:

Year:  2019        PMID: 31747616     DOI: 10.1016/j.celrep.2019.10.082

Source DB:  PubMed          Journal:  Cell Rep            Impact factor:   9.423


  18 in total

1.  Glycan analysis of human neutrophil granules implicates a maturation-dependent glycosylation machinery.

Authors:  Vignesh Venkatakrishnan; Régis Dieckmann; Ian Loke; Harry C Tjondro; Sayantani Chatterjee; Johan Bylund; Morten Thaysen-Andersen; Niclas G Karlsson; Anna Karlsson-Bengtsson
Journal:  J Biol Chem       Date:  2020-07-14       Impact factor: 5.157

2.  Neutrophil specific granule and NETosis defects in gray platelet syndrome.

Authors:  Cathelijn E M Aarts; Kate Downes; Arie J Hoogendijk; Evelien G G Sprenkeler; Roel P Gazendam; Rémi Favier; Marie Favier; Anton T J Tool; John L van Hamme; Myrto A Kostadima; Kate Waller; Barbara Zieger; Maaike G J M van Bergen; Saskia M C Langemeijer; Bert A van der Reijden; Hans Janssen; Timo K van den Berg; Robin van Bruggen; Alexander B Meijer; Willem H Ouwehand; Taco W Kuijpers
Journal:  Blood Adv       Date:  2021-01-26

3.  Spatial discordances between mRNAs and proteins in the intestinal epithelium.

Authors:  Yotam Harnik; Lisa Buchauer; Shani Ben-Moshe; Inna Averbukh; Yishai Levin; Alon Savidor; Raya Eilam; Andreas E Moor; Shalev Itzkovitz
Journal:  Nat Metab       Date:  2021-12-20

4.  Comprehensive proteomic analysis of murine terminal erythroid differentiation.

Authors:  Emilie-Fleur Gautier; Marjorie Leduc; Meriem Ladli; Vincent P Schulz; Carine Lefèvre; Ismael Boussaid; Michaela Fontenay; Catherine Lacombe; Frédérique Verdier; François Guillonneau; Christopher D Hillyer; Narla Mohandas; Patrick G Gallagher; Patrick Mayeux
Journal:  Blood Adv       Date:  2020-04-14

Review 5.  Leukocyte Immunoglobulin-Like Receptors (LILRs) on Human Neutrophils: Modulators of Infection and Immunity.

Authors:  Alexander L Lewis Marffy; Alex J McCarthy
Journal:  Front Immunol       Date:  2020-05-13       Impact factor: 7.561

6.  Hyper-truncated Asn355- and Asn391-glycans modulate the activity of neutrophil granule myeloperoxidase.

Authors:  Harry C Tjondro; Julian Ugonotti; Rebeca Kawahara; Sayantani Chatterjee; Ian Loke; Siyun Chen; Fabian Soltermann; Hannes Hinneburg; Benjamin L Parker; Vignesh Venkatakrishnan; Regis Dieckmann; Oliver C Grant; Johan Bylund; Alison Rodger; Robert J Woods; Anna Karlsson-Bengtsson; Weston B Struwe; Morten Thaysen-Andersen
Journal:  J Biol Chem       Date:  2020-12-03       Impact factor: 5.157

Review 7.  Neutrophils in the Pathogenesis of Rheumatoid Arthritis and Systemic Lupus Erythematosus: Same Foe Different M.O.

Authors:  Michele Fresneda Alarcon; Zoe McLaren; Helen Louise Wright
Journal:  Front Immunol       Date:  2021-03-04       Impact factor: 8.786

8.  Maternal Iron Deficiency Modulates Placental Transcriptome and Proteome in Mid-Gestation of Mouse Pregnancy.

Authors:  Chang Cao; Miguel A Prado; Liang Sun; Shira Rockowitz; Piotr Sliz; Joao A Paulo; Daniel Finley; Mark D Fleming
Journal:  J Nutr       Date:  2021-05-11       Impact factor: 4.798

9.  Human oral mucosa cell atlas reveals a stromal-neutrophil axis regulating tissue immunity.

Authors:  Drake Winslow Williams; Teresa Greenwell-Wild; Laurie Brenchley; Nicolas Dutzan; Andrew Overmiller; Andrew Phillip Sawaya; Simone Webb; Daniel Martin; George Hajishengallis; Kimon Divaris; Maria Morasso; Muzlifah Haniffa; Niki Maria Moutsopoulos
Journal:  Cell       Date:  2021-06-14       Impact factor: 66.850

10.  Linker histone H1.2 and H1.4 affect the neutrophil lineage determination.

Authors:  Gabriel Sollberger; Robert Streeck; Falko Apel; Brian Edward Caffrey; Arthur I Skoultchi; Arturo Zychlinsky
Journal:  Elife       Date:  2020-05-11       Impact factor: 8.140

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