| Literature DB >> 31740693 |
Cui YongXia1, Liu RuiXin2,3, Lin ZhaoZhou4,5, Chen PengJu1, Wang LiLi1, Wang YanLi1,6, Chen SuiQing7.
Abstract
'Quality evaluation based on color grading' is one of the features used in Chinese medicine discrimination. In order to assess the feasibility of electronic eye (E-eye) in implementing 'quality evaluation based on color grading', the present study applied an IRIS VA400 E-eye to test 58 batches of Corni Fructus samples. Their optical data were acquired and combined with their corresponding classes. A total of four quality discrimination models were produced according to discrimination analysis (DA), least squares support vector machine (LS-SVM), partial least squares-discrimination analysis (PLS-DA), and principal component analysis-discrimination analysis (PCA-DA). The accuracy rate of the aforementioned 4 cross evaluation models were 86.21%, 89.66%, 81.03% and 91.38%, respectively. Therefore, the PCA-DA method was used to build the final discrimination model for classifying Corni Fructus or discriminating its quality.Entities:
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Year: 2019 PMID: 31740693 PMCID: PMC6861232 DOI: 10.1038/s41598-019-53210-5
Source DB: PubMed Journal: Sci Rep ISSN: 2045-2322 Impact factor: 4.379
Grading standards for Corni Fructus samples.
| Class | Appearance | Ratio of fruit kernel over the whole fruit |
|---|---|---|
| 1 | Bright red; crinkled, shiny; dark red area ≤10% | ≤1% |
| 2 | Dark red; crinkled, shiny; reddish brown area ≤15% | ≤3% |
| 3 | Reddish brown; crinkled, shiny; purplish black area ≤15% | ≤3% |
| 4 | Purplish black; crinkled | ≤3% |
Note: all four classes shared the same requirements of “fruit flesh was irregular, flaky or cystic; sour and astringent; no impurity, moth eaten or mildew”.
Class of 58 Corni Fructus samples.
| No. | class | Place of origin | Place of purchase |
|---|---|---|---|
| 101 | 1 | Xixia, Henan province | Taiping Town, Xixia, Henan province |
| 102 | 1 | Xiping Town, Xixia, Henan province | |
| 103 | 1 | Xixia, Henan province | |
| 104 | 1 | Taiping Town, Xixia, Henan province | |
| 105 | 1 | Sangping Town, Xixia, Henan province | |
| 106 | 1 | Luanchuan, Henan province | Jiaohe Town, Luanchuan, Henan province |
| 107 | 1 | Xixia, Henan province | China (Bozhou) Chinese medicinal material trading center |
| 201 | 2 | Xixia, Henan province | Xixia, Henan province |
| 202 | 2 | Luanchuan, Henan province | Baitu Town, Luanchuan, Henan province |
| 203 | 2 | Xixia, Henan province | Genfang Village, Xixia, Henan province |
| 204 | 2 | Luanchuan, Henan province | Qiuba Town, Luanchuan, Henan province |
| 205 | 2 | Henan province | Hebei Anguodongfang Medicine Tower |
| 206 | 2 | Shaanxi province | Hebei Anguodongfang Medicine Tower |
| 207 | 2 | Henan province | Hebei Anguodongfang Medicine Tower |
| 208 | 2 | Neixiang, Henan province | Zhongjing Wanxi Pharmaceutical company |
| 209 | 2 | Henan province | Hebei Anguodongfang Medicine Tower |
| 210 | 2 | Song county, Henan province | Checun Town, Song County, Henan province |
| 211 | 2 | Nanzhao, Henan province | Badi Village, Nanzhao, Henan province |
| 212 | 2 | Nanzhao, Henan province | Wallnut tree Village, Nanzhao, Henan province |
| 213 | 2 | Nanzhao, Henan province | Tianqiao Village, Nanzhao, Henan province |
| 214 | 2 | Neixiang, Henan province | Zhongjing Wanxi Pharmaceutical company |
| 215 | 2 | Luanchuan, Henan province | Jiaohe Town, Luanchuan, Henan province |
| 216 | 2 | Luanchuan, Henan province | Taowan Town, Luanchuan, Henan province |
| 217 | 2 | Luanchuan, Henan province | Heyu Town, Luanchuan, Henan province |
| 218 | 2 | Henan province | China (Bozhou) Chinese medicinal material trading center |
| 219 | 2 | Neixiang, Henan province | Zhongjing Wanxi Pharmaceutical company |
| 220 | 2 | Xixia, Henan province | Xixia, Henan province |
| 221 | 2 | Luanchuan, Henan province | Baitu Town, Luanchuan, Henan province |
| 222 | 2 | Neixiang, Henan province | Zhongjing Wanxi Pharmaceutical company |
| 223 | 2 | Neixiang, Henan province | Zhongjing Wanxi Pharmaceutical company |
| 224 | 2 | Luanchuan, Henan province | China (Bozhou) Chinese medicinal material trading center |
| 225 | 2 | Shaanxi province | Hebei Anguodongfang Medicine Tower |
| 226 | 2 | Shaanxi province | Hebei Anguodongfang Medicine Tower |
| 227 | 2 | Shaanxi province | Hebei Anguodongfang Medicine Tower |
| 228 | 2 | Shaanxi province | Hebei Anguodongfang Medicine Tower |
| 229 | 2 | Shaanxi province | Hebei Anguodongfang Medicine Tower |
| 230 | 2 | Shaanxi province | Hebei Anguodongfang Medicine Tower |
| 301 | 3 | Xixia, Henan province | Xixia, Henan province |
| 302 | 3 | Zhejiang province | China (Bozhou) Chinese medicinal material trading center |
| 303 | 3 | Henan province | China (Bozhou) Chinese medicinal material trading center |
| 304 | 3 | NA | NA |
| 305 | 3 | Zhejiang province | China (Bozhou) Chinese medicinal material trading center |
| 306 | 3 | Xixia, Henan province | Xixia, Henan province |
| 307 | 3 | Xixia, Henan province | Xixia, Henan province |
| 401 | 4 | NA | NA |
| 402 | 4 | Xixia, Henan province | Xixia, Henan province |
| 403 | 4 | Xixia, Henan province | Xixia, Henan province |
| 404 | 4 | Xixia, Henan province | Xixia, Henan province |
| 405 | 4 | Henan province | China (Bozhou) Chinese medicinal material trading center |
| 406 | 4 | Henan province | China (Bozhou) Chinese medicinal material trading center |
| 407 | 4 | Xixia, Henan province | Xixia, Henan province |
| 408 | 4 | Taibai County, Henan province | Taochuan Town, Taibai County, Henan province |
| 409 | 4 | Xixia, Henan province | Xixia, Henan province |
| 410 | 4 | Xixia, Henan province | Xixia, Henan province |
| 411 | 4 | Xixia, Henan province | Xixia, Henan province |
| 412 | 4 | Xixia, Henan province | Xixia, Henan province |
| 413 | 4 | Xixia, Henan province | Xixia, Henan province |
| 414 | 4 | Xixia, Henan province | Xixia, Henan province |
Note: “NA” referred to “Not Available”.
26 color numbers representing specific colors.
| Color no. | Color description | Color no. | Color description |
|---|---|---|---|
| 1075 | dark grayish reddish brown | 1861 | dark purplish red |
| 1076 | very dark purple | 1876 | moderate brown |
| 1331 | dark reddish brown | 1877 | dark grayish red |
| 1332 | dark purplish red | 1878 | dark purplish red |
| 1347 | dark grayish yellowish brown | 1893 | grayish yellowish brown |
| 1348 | dark reddish gray | 1894 | dark reddish gray |
| 1349 | dark grayish purple | 2133 | grayish red |
| 1603 | moderate brown | 2149 | moderate brown |
| 1604 | dark grayish red | 2150 | grayish red |
| 1605 | dark purplish red | 2166 | grayish yellowish brown |
| 1621 | dark reddish gray | 2167 | grayish red |
| 1622 | dark grayish purple | 2422 | light brown |
| 1860 | dark red | 2423 | grayish red |
Figure 1The landscape of Corni Fructus samples depicted with 26 color numbers.
Figure 2Multinormality test of 58 samples.
Discrimination of the DA model detected by leave-one-out cross validation.
| real/predicted | class 1 | class 2 | class 3 | class 4 | not assigned | accuracy |
|---|---|---|---|---|---|---|
| class 1 | 6 | 1 | 0 | 0 | 0 | 86.21% |
| class 2 | 4 | 26 | 0 | 0 | 0 | |
| class 3 | 0 | 0 | 6 | 1 | 0 | |
| class 4 | 0 | 0 | 2 | 12 | 0 |
Discrimination of the LS-SVM model by leave-one-out cross validation.
| real/predicted | class 1 | class 2 | class 3 | class 4 | not assigned | accuracy |
|---|---|---|---|---|---|---|
| class 1 | 5 | 2 | 0 | 0 | 0 | 89.66% |
| class 2 | 2 | 28 | 0 | 0 | 0 | |
| class 3 | 0 | 0 | 6 | 1 | 0 | |
| class 4 | 0 | 0 | 1 | 13 | 0 |
Figure 3(a) Chart of “latent variables-error rate”; (b) chart of “latent variables-percentage of not assigned samples”.
Figure 4Variance contribution percentage of latent variables on independent variables (a) and dependent variables (b).
Discrimination results of the PLS-DA model that were detected with leave-one-out cross evaluation.
| real/predicted | class 1 | class 2 | class 3 | class 4 | not assigned | accuracy |
|---|---|---|---|---|---|---|
| class 1 | 4 | 1 | 0 | 0 | 2 | 81.03% |
| class 2 | 1 | 25 | 0 | 0 | 4 | |
| class 3 | 0 | 0 | 6 | 0 | 1 | |
| class 4 | 0 | 0 | 0 | 12 | 2 |
Figure 5Chart of scores on latent variables in PLS-DA model.
Figure 6The relation of principal components-error rate.
Figure 7(a) Variance contribution percentage of individual principle components on variables; (b) cumulative variance contribution percentage of principle components on variables.
Discrimination results of the PCA-DA model that were detected with the leave-one-out cross validation.
| real/predicted | class 1 | class 2 | class 3 | class 4 | not assigned | accuracy |
|---|---|---|---|---|---|---|
| class 1 | 6 | 1 | 0 | 0 | 0 | 91.38% |
| class 2 | 1 | 29 | 0 | 0 | 0 | |
| class 3 | 0 | 0 | 6 | 1 | 0 | |
| class 4 | 0 | 0 | 2 | 12 | 0 |
Figure 8Chart of scores on principle components in the PCA-DA model.
Discrimination results of PCA-DA full-sample model.
| real/predicted | class 1 | class 2 | class 3 | class 4 | not assigned | accuracy |
|---|---|---|---|---|---|---|
| class 1 | 6 | 1 | 0 | 0 | 0 | 98.28% |
| class 2 | 0 | 30 | 0 | 0 | 0 | |
| class 3 | 0 | 0 | 7 | 0 | 0 | |
| class 4 | 0 | 0 | 0 | 14 | 0 |
Figure 9Chart of scores on canonical variables of the PCA-DA model.
Figure 10Variation information determined by 26 variables.
Figure 11Loading diagram of latent variables in the PCA-DA full-sample model.
Figure 12Chart of scores on principle components in the PCA-DA model in the presence of only 3 classes.