Literature DB >> 31728804

Generate Structured Radiology Report from CT Images Using Image Annotation Techniques: Preliminary Results with Liver CT.

Samira Loveymi1, Mir Hossein Dezfoulian1, Muharram Mansoorizadeh2.   

Abstract

A medical annotation system for radiology images extracts clinically useful information from the images, allowing the machines to infer useful abstract semantics and become capable of automatic reasoning and making diagnostic decision. It also supplies human-interpretable explanation for the images. We have implemented a computerized framework that, given a liver CT image, predicts radiological annotations with high accuracy, in order to generate a structured report, which includes predicting very specific high-level semantic content. Each report of a liver CT image is related to different inhomogeneous parts like the liver, lesion, and vessel. We put forward a claim that gathering all kinds of features is not suitable for filling all parts of the report. As a matter of fact, for each group of annotations, one should find and extract the best feature that results in the best answers for that specific annotation. To this end, the main challenge is discovering the relationships between these specific semantic concepts and their association with the low-level image features. Our framework was implemented by combining a set of the state-of-the-art low-level imaging features. In addition, we propose a novel feature (DLBP (deep local binary pattern)) based on LBP that incorporates multi-slice analysis in CT images and further improves the performance. In order to model our annotation system, two methods were used, namely multi-class support vector machine (SVM) and random subspace (RS) which is an ensemble learning method. Applying this representation leads to a high prediction accuracy of 93.1% despite its relatively low dimension in comparison with the existing works.

Entities:  

Keywords:  Computed tomography; Deep local binary pattern; Liver CT images; Medical image annotation

Year:  2020        PMID: 31728804      PMCID: PMC7165219          DOI: 10.1007/s10278-019-00298-w

Source DB:  PubMed          Journal:  J Digit Imaging        ISSN: 0897-1889            Impact factor:   4.056


  15 in total

1.  3D Riesz-wavelet based Covariance descriptors for texture classification of lung nodule tissue in CT.

Authors:  Pol Cirujeda; Henning Muller; Daniel Rubin; Todd A Aguilera; Billy W Loo; Maximilian Diehn; Xavier Binefa; Adrien Depeursinge
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2015

2.  Using natural language processing to extract mammographic findings.

Authors:  Hongyuan Gao; Erin J Aiello Bowles; David Carrell; Diana S M Buist
Journal:  J Biomed Inform       Date:  2015-02-03       Impact factor: 6.317

3.  Automatic medical X-ray image classification using annotation.

Authors:  Mohammad Reza Zare; Ahmed Mueen; Woo Chaw Seng
Journal:  J Digit Imaging       Date:  2014-02       Impact factor: 4.056

4.  Classification of Medical Images in the Biomedical Literature by Jointly Using Deep and Handcrafted Visual Features.

Authors:  Jianpeng Zhang; Yong Xia; Yutong Xie; Michael Fulham; David Dagan Feng
Journal:  IEEE J Biomed Health Inform       Date:  2017-11-20       Impact factor: 5.772

5.  Semantic description of liver CT images: an ontological approach.

Authors:  Nadin Kokciyan; Rustu Turkay; Suzan Uskudarli; Pinar Yolum; Baris Bakir; Burak Acar
Journal:  IEEE J Biomed Health Inform       Date:  2014-07       Impact factor: 5.772

6.  A fully automatic end-to-end method for content-based image retrieval of CT scans with similar liver lesion annotations.

Authors:  A B Spanier; N Caplan; J Sosna; B Acar; L Joskowicz
Journal:  Int J Comput Assist Radiol Surg       Date:  2017-11-16       Impact factor: 2.924

7.  Texture-specific bag of visual words model and spatial cone matching-based method for the retrieval of focal liver lesions using multiphase contrast-enhanced CT images.

Authors:  Yingying Xu; Lanfen Lin; Hongjie Hu; Dan Wang; Wenchao Zhu; Jian Wang; Xian-Hua Han; Yen-Wei Chen
Journal:  Int J Comput Assist Radiol Surg       Date:  2017-11-05       Impact factor: 2.924

8.  Predicting visual semantic descriptive terms from radiological image data: preliminary results with liver lesions in CT.

Authors:  Adrien Depeursinge; Camille Kurtz; Christopher Beaulieu; Sandy Napel; Daniel Rubin
Journal:  IEEE Trans Med Imaging       Date:  2014-05-01       Impact factor: 10.048

9.  On combining image-based and ontological semantic dissimilarities for medical image retrieval applications.

Authors:  Camille Kurtz; Adrien Depeursinge; Sandy Napel; Christopher F Beaulieu; Daniel L Rubin
Journal:  Med Image Anal       Date:  2014-07-02       Impact factor: 8.545

10.  Annotation and retrieval of clinically relevant images.

Authors:  Dina Demner-Fushman; Sameer Antani; Matthew Simpson; George R Thoma
Journal:  Int J Med Inform       Date:  2009-07-09       Impact factor: 4.046

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  3 in total

Review 1.  Explainable medical imaging AI needs human-centered design: guidelines and evidence from a systematic review.

Authors:  Haomin Chen; Catalina Gomez; Chien-Ming Huang; Mathias Unberath
Journal:  NPJ Digit Med       Date:  2022-10-19

2.  Automatic Generation of Structured Radiology Reports for Volumetric Computed Tomography Images Using Question-Specific Deep Feature Extraction and Learning.

Authors:  Samira Loveymi; Mir Hossein Dezfoulian; Muharram Mansoorizadeh
Journal:  J Med Signals Sens       Date:  2021-07-21

3.  Intelligent Labeling of Tumor Lesions Based on Positron Emission Tomography/Computed Tomography.

Authors:  Shiping Ye; Chaoxiang Chen; Zhican Bai; Jinming Wang; Xiaoxaio Yao; Olga Nedzvedz
Journal:  Sensors (Basel)       Date:  2022-07-10       Impact factor: 3.847

  3 in total

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