Literature DB >> 31726114

Development of a real-time loop-mediated isothermal amplification (LAMP) assay and visual LAMP assay for detection of African swine fever virus (ASFV).

Deguo Wang1, Jianghan Yu2, Yongzhen Wang1, Meng Zhang2, Peng Li3, Meng Liu4, Yanhong Liu5.   

Abstract

African swine fever (ASF) is a fatal disease caused by a virus in domestic pigs. In this study, a real-time loop-mediated isothermal amplification (LAMP) assay and visual LAMP assay were developed for the detection of African swine fever virus (ASFV). LAMP primers targeting the p10 gene of ASFV were designed, the LAMP reaction system was optimized with plasmid pUC57 containing the p10 gene sequence, and the specificities of the real-time LAMP and the visual assays were tested with the DNA or cDNA of pseudorabies virus (PRV), porcine circovirus type 2 (PCV2), classical swine fever virus (CSFV), porcine reproductive and respiratory syndrome virus (PRRSV), porcine parvovirus (PPV) and ASFV, as well as the plasmid pUC57 containing the p10 gene sequence. The detection limits were determined using a serial dilution of plasmid pUC57 containing the p10 gene sequence. Our results showed that the LAMP assays could accurately and specifically detect ASFV with a detection limit of 30 copies per μl-1 of pUC57 containing p10 gene sequence. In addition, the LAMP assays were further evaluated using various genotypes of ASFV strains. Furthermore, the LAMP assays are comparable with the well-established real-time PCR assay. This study provides promising solutions for facilitating preliminary and cost-effective surveillance for prevention and control of ASFV. Published by Elsevier B.V.

Entities:  

Keywords:  African swine fever (ASF); African swine fever virus (ASFV); Loop-mediated isothermal amplification (LAMP)

Mesh:

Substances:

Year:  2019        PMID: 31726114     DOI: 10.1016/j.jviromet.2019.113775

Source DB:  PubMed          Journal:  J Virol Methods        ISSN: 0166-0934            Impact factor:   2.014


  22 in total

1.  Loop-Mediated Isothermal Amplification Combined with Lateral Flow Dipstick for On-Site Diagnosis of African Swine Fever Virus.

Authors:  Lei Zuo; Zengxu Song; Yi Zhang; Xiwen Zhai; Yaru Zhai; Xueran Mei; Xin Yang; Hongning Wang
Journal:  Virol Sin       Date:  2020-11-06       Impact factor: 4.327

2.  Development and Application of a Duplex Droplet Digital Polymerase Chain Reaction Assay for Detection and Differentiation of EP402R-Deleted and Wild-Type African Swine Fever Virus.

Authors:  Junhai Zhu; Weijun Jian; Yifan Huang; Qi Gao; Fei Gao; Huahan Chen; Guihong Zhang; Ming Liao; Wenbao Qi
Journal:  Front Vet Sci       Date:  2022-06-06

3.  Polymerase chain reaction and loop-mediated isothermal amplification targeting lic13162, lic20239, and lipL32 genes for leptospirosis diagnosis.

Authors:  Violetta Dias Pacce; Margarida Neves Souza; Natasha Rodrigues de Oliveira; Frederico Schmitt Kremer; Sérgio Jorge; Nilo Ikuta; Vagner Ricardo Lunge; Odir Antônio Dellagostin
Journal:  Braz J Microbiol       Date:  2022-02-05       Impact factor: 2.214

4.  Development of A Super-Sensitive Diagnostic Method for African Swine Fever Using CRISPR Techniques.

Authors:  Meishen Ren; Hong Mei; Ming Zhou; Zhen F Fu; Heyou Han; Dingren Bi; Fuhu Peng; Ling Zhao
Journal:  Virol Sin       Date:  2021-01-07       Impact factor: 4.327

5.  Development of a Potential Penside Colorimetric LAMP Assay Using Neutral Red for Detection of African Swine Fever Virus.

Authors:  Yang Wang; Junfei Dai; Yongsheng Liu; Jifei Yang; Qian Hou; Yunwen Ou; Yaozhong Ding; Bing Ma; Haotai Chen; MiaoMiao Li; Yuefeng Sun; Haixue Zheng; Keshan Zhang; Ashenafi Kiros Wubshet; Alexei D Zaberezhny; Taras I Aliper; Kazimierz Tarasiuk; Zygmunt Pejsak; Zhijie Liu; Yongguang Zhang; Jie Zhang
Journal:  Front Microbiol       Date:  2021-04-23       Impact factor: 5.640

Review 6.  Biosensing strategies for the electrochemical detection of viruses and viral diseases - A review.

Authors:  Laís Canniatti Brazaca; Pãmyla Layene Dos Santos; Paulo Roberto de Oliveira; Diego Pessoa Rocha; Jéssica Santos Stefano; Cristiane Kalinke; Rodrigo Alejandro Abarza Muñoz; Juliano Alves Bonacin; Bruno Campos Janegitz; Emanuel Carrilho
Journal:  Anal Chim Acta       Date:  2021-03-12       Impact factor: 6.911

7.  An Isothermal Molecular Point of Care Testing for African Swine Fever Virus Using Recombinase-Aided Amplification and Lateral Flow Assay Without the Need to Extract Nucleic Acids in Blood.

Authors:  Yuhang Zhang; Qingmei Li; Junqing Guo; Dongliang Li; Li Wang; Xun Wang; Guangxu Xing; Ruiguang Deng; Gaiping Zhang
Journal:  Front Cell Infect Microbiol       Date:  2021-03-17       Impact factor: 5.293

8.  Development of an indirect ELISA to specifically detect antibodies against African swine fever virus: bioinformatics approaches.

Authors:  Zhan Gao; Jun-Jun Shao; Guang-Lei Zhang; Su-Dan Ge; Yan-Yan Chang; Lei Xiao; Hui-Yun Chang
Journal:  Virol J       Date:  2021-05-05       Impact factor: 4.099

9.  Development of Recombinase Aided Amplification Combined With Disposable Nucleic Acid Test Strip for Rapid Detection of Porcine Circovirus Type 2.

Authors:  Wenxian Chen; Jindai Fan; Zhaoyao Li; Yuanyuan Zhang; Yuwei Qin; Keke Wu; Xiaowen Li; Yuwan Li; Shuangqi Fan; Mingqiu Zhao
Journal:  Front Vet Sci       Date:  2021-06-25

10.  Multiplex and visual detection of African Swine Fever Virus (ASFV) based on Hive-Chip and direct loop-mediated isothermal amplification.

Authors:  Yuan-Shou Zhu; Ning Shao; Jian-Wei Chen; Wen-Bao Qi; Yang Li; Peng Liu; Yan-Jing Chen; Su-Ying Bian; Yan Zhang; Sheng-Ce Tao
Journal:  Anal Chim Acta       Date:  2020-10-08       Impact factor: 6.558

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