Literature DB >> 3172208

Thermodynamic study of the apomyoglobin structure.

Y V Griko1, P L Privalov, S Y Venyaminov, V P Kutyshenko.   

Abstract

Sperm whale apomyoglobin has been studied thermodynamically in solutions with different pH and temperature by scanning microcalorimetry, viscosimetry, nuclear magnetic resonance and circular dichroism spectrometry, and by electrometric and calorimetric titration. It has been shown that apomyoglobin in solutions with pH close to neutral has a compact and unique spatial structure with an extended hydrophobic core. This structure is maximally stable at about 30 degrees C and breaks down reversibly both upon heating or cooling from this temperature. The process of breakdown of this structure is highly co-operative and can be regarded as a transition between two macroscopic states of protein, the native and denatured states. In contrast to the native state, which is specified by definite values of compactness and ellipticity, the compactness and ellipticity of the denatured state of apomyoglobin depend strongly on pH; with a decrease of pH below 4.0, these parameters gradually approach the values of the random coil.

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Year:  1988        PMID: 3172208     DOI: 10.1016/0022-2836(88)90525-6

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  59 in total

1.  The compact and expanded denatured conformations of apomyoglobin in the methanol-water solvent.

Authors:  Y O Kamatari; S Ohji; T Konno; Y Seki; K Soda; M Kataoka; K Akasaka
Journal:  Protein Sci       Date:  1999-04       Impact factor: 6.725

2.  The unfolding enthalpy of the pH 4 molten globule of apomyoglobin measured by isothermal titration calorimetry.

Authors:  M Jamin; M Antalik; S N Loh; D W Bolen; R L Baldwin
Journal:  Protein Sci       Date:  2000-07       Impact factor: 6.725

3.  Apolar and polar solvation thermodynamics related to the protein unfolding process.

Authors:  Audun Bakk; Johan S Høye; Alex Hansen
Journal:  Biophys J       Date:  2002-02       Impact factor: 4.033

4.  A cavity-forming mutation in insulin induces segmental unfolding of a surrounding alpha-helix.

Authors:  Bin Xu; Qing-Xin Hua; Satoe H Nakagawa; Wenhua Jia; Ying-Chi Chu; Panayotis G Katsoyannis; Michael A Weiss
Journal:  Protein Sci       Date:  2002-01       Impact factor: 6.725

5.  Hydration of apomyoglobin in native, molten globule, and unfolded states by using microwave dielectric spectroscopy.

Authors:  Takashi Kamei; Motohisa Oobatake; Makoto Suzuki
Journal:  Biophys J       Date:  2002-01       Impact factor: 4.033

6.  Primary folding dynamics of sperm whale apomyoglobin: core formation.

Authors:  Miriam Gulotta; Eduard Rogatsky; Robert H Callender; R Brian Dyer
Journal:  Biophys J       Date:  2003-03       Impact factor: 4.033

7.  What causes hyperfluorescence: folding intermediates or conformationally flexible native states?

Authors:  John Ervin; Edgar Larios; Szabolcs Osváth; Klaus Schulten; Martin Gruebele
Journal:  Biophys J       Date:  2002-07       Impact factor: 4.033

8.  Modulation of the structural integrity of helix F in apomyoglobin by single amino acid replacements.

Authors:  Paola Picotti; Anna Marabotti; Alessandro Negro; Valeria Musi; Barbara Spolaore; Marcello Zambonin; Angelo Fontana
Journal:  Protein Sci       Date:  2004-06       Impact factor: 6.725

9.  Nonspecific hydrophobic interactions stabilize an equilibrium intermediate of apomyoglobin at a key position within the AGH region.

Authors:  Angela M Bertagna; Doug Barrick
Journal:  Proc Natl Acad Sci U S A       Date:  2004-08-16       Impact factor: 11.205

10.  Dynamics-stability relationships in apo- and holomyoglobin: a combined neutron scattering and molecular dynamics simulations study.

Authors:  Andreas Maximilian Stadler; Eric Pellegrini; Mark Johnson; Jörg Fitter; Giuseppe Zaccai
Journal:  Biophys J       Date:  2012-01-18       Impact factor: 4.033

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