| Literature DB >> 31721892 |
Andre R Brunoni1, Angel Carracedo2, Olalla M Amigo2, Ana L Pellicer2, Leda Talib3, Andre F Carvalho4, Paulo A Lotufo1, Isabela M Benseñor1, Wagner Gattaz3, Carolina Cappi5.
Abstract
OBJECTIVE: We investigated whether single nucleotide polymorphisms (SNPs) associated with neuroplasticity and activity of monoamine neurotransmitters, such as the brain-derived neurotrophic factor (BDNF, rs6265), the serotonin transporter (SLC6A4, rs25531), the tryptophan hydroxylase 1 (TPH1, rs1800532), the 5-hydroxytryptamine receptor 2A (HTR2A, rs6311, rs6313, rs7997012), and the catechol-O-methyltransferase (COMT, rs4680) genes, are associated with efficacy of transcranial direct current stimulation (tDCS) in major depression.Entities:
Mesh:
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Year: 2019 PMID: 31721892 PMCID: PMC7115450 DOI: 10.1590/1516-4446-2019-0620
Source DB: PubMed Journal: Braz J Psychiatry ISSN: 1516-4446 Impact factor: 2.697
Single nucleotide polymorphisms (SNPs) investigated in this study
| Gene name | Gene | SNP | MAF allele |
|---|---|---|---|
| Brain-derived neurotrophic factor |
| rs6265 | T (Met) |
| Solute carrier family 6 member 4 |
| rs25531 | Short ( |
| Tryptophan hydroxylase 1 |
| rs1800532 | T |
| 5-Hydroxytryptamine receptor 2A |
| rs6311 | T |
| rs6313 | A | ||
| rs7997012 | A | ||
| Catechol-O-methyltransferase |
| rs4680 | A (Met) |
For each SNP, analyses were performed to compare carriers of the minor allele frequency (MAF) allele vs. homozygotes for the major allele.
Bayesian analysis of Hardy-Weinberg equilibrium (HWE)
| Gene name | Gene | SNP | Bayesian asymptotic e-value |
|---|---|---|---|
| Brain-derived neurotrophic factor |
| rs6265 | 0.71 |
| Solute carrier family 6 member 4 |
| rs25531 | 0.07 |
| Tryptophan hydroxylase 1 |
| rs1800532 | 0.17 |
| 5-Hydroxytryptamine receptor 2A |
| rs6311 | 0.04 |
| rs6313 | 0.07 | ||
| rs7997012 | 0.15 | ||
| Catechol-O-methyltransferase |
| rs4680 | 0.33 |
Full Bayesian test for examining HWE.
Clinical, demographic, and allele distribution of the sample
| Placebo (n=45) | Escitalopram (n=75) | tDCS (n=75) | p-value | |
|---|---|---|---|---|
| Clinical characteristics | ||||
| Female | 31 (68.9) | 52 (70.3) | 49 (66.2) | 0.86 |
| Age, mean (SD) | 41.8 (13.1) | 41.5 (12.5) | 45.2 (11.8) | 0.15 |
| Years of schooling | 15.7 (3.45) | 14.5 (4.1) | 15.7 (5.2) | 0.24 |
| White ethnicity (self-declared) | 10 (22.2) | 19 (25.3) | 25 (33.3) | 0.35 |
| Body mass index, mean (SD) | 27.2 (6) | 26.3 (5) | 25.7 (4.8) | 0.31 |
| Depression | ||||
| Baseline HDRS-17, mean (SD) | 22.5 (4.1) | 21.8 (3.6) | 21.6 (4.1) | 0.44 |
| Endpoint HDRS-17, mean (SD) | 16.5 (8.3) | 10.3 (5.9) | 13.1 (6.6) | < 0.001 |
| Response rate | 11 (24.4) | 38 (50.7) | 30 (40) | 0.02 |
| Treatment-resistant depression | 15 (33.3) | 19 (25.3) | 26 (34.7) | 0.42 |
| SNPs | ||||
| | 17 (37.8) | 27 (36) | 24 (32) | 0.78 |
| | 28 (62.2) | 48 (64) | 51 (68) | |
| | 31 (68.9) | 45 (60) | 53 (70.7) | 0.35 |
| | 14 (31.1) | 30 (40) | 22 (29.3) | |
| | 32 (71.1) | 47 (62.7) | 42 (56) | 0.25 |
| | 13 (28.9) | 28 (37.3) | 33 (44) | |
| | 14 (31.1) | 24 (33.3) | 58 (77.3) | 0.32 |
| | 31 (68.9) | 50 (66.7) | 17 (22.7) | |
| | 28 (62.2) | 57 (76) | 46 (61.3) | 0.11 |
| | 17 (37.8) | 18 (24) | 29 (38.7) | |
| | 28 (62.2) | 58 (77.3) | 46 (61.3) | 0.07 |
| | 17 (37.8) | 17 (22.7) | 29 (38.7) | |
| | 26 (57.8) | 35 (46.7) | 37 (49.3) | 0.49 |
| | 19 (42.2) | 40 (53.3) | 38 (50.7) | |
Data presented as n (%), unless otherwise specified.
BDNF = brain-derived neurotrophic factor; COMT = catechol-o-methyltransferase; HDRS = Hamilton Depression Rating Scale; SD = standard deviation; SLC6A4 = solute carrier family 6, member 4; tDCS = transcranial direct current stimulation; TPH1 = tryptophan hydroxylase 1.
Depression scores at baseline (week 0), endpoint (week 10), and score difference (baseline minus endpoint) according to group and investigated single nucleotide polymorphisms (SNPs)
| Placebo | Escitalopram | tDCS | |
|---|---|---|---|
|
| |||
| Met | |||
| Baseline | 21.2 (3.7) | 21.3 (4) | 23 (3.6) |
| Endpoint | 14.8 (6.3) | 9.8 (6.4) | 13.7 (4.9) |
| Difference | 6.3 (6) | 11.5 (7.8) | 9.3 (4.9) |
| Val/Val | |||
| Baseline | 23.3 (4.2) | 22 (3.4) | 20.9 (4.2) |
| Endpoint | 17.5 (9.3) | 10.5 (5.6) | 12.8 (7.2) |
| Difference | 5.9 (8.7) | 11.5 (5.8) | 8.1 (7.6) |
|
| |||
| Short | |||
| Baseline | 22.5 (4.1) | 21.7 (3.9) | 21.7 (4.3) |
| Endpoint | 17.5 (7.6) | 10.7 (6.1) | 12.9 (6.4) |
| Difference | 5 (6.9) | 11 (6.9) | 8.8 (7) |
| Long/Long | |||
| Baseline | 22.6 (4.4) | 21.9 (3.2) | 21.2 (3.6) |
| Endpoint | 14.3 (9.6) | 9.7 (5.5) | 13.6 (7.1) |
| Difference | 8.3 (9.1) | 12.2 (6) | 7.7 (6.7) |
|
| |||
| T | |||
| Baseline | 22.2 (4) | 21.8 (3.7) | 21.9 (3.9) |
| Endpoint | 16.3 (8.4) | 11.4 (5.9) | 13 (5.7) |
| Difference | 5.9 (7.7) | 10.3 (6.7) | 8.9 (6.1) |
| G/G | |||
| Baseline | 23.2 (4.6) | 21.8 (3.4) | 21.1 (4.6) |
| Endpoint | 16.8 (8.3) | 8.4 (5.4) | 13.2 (7.6) |
| Difference | 6.4 (8) | 13.5 (5.9) | 8 (7.9) |
|
| |||
| G | |||
| Baseline | 21.9 (3.3) | 21.6 (3.6) | 21.4 (3.8) |
| Endpoint | 16.4 (7) | 11.4 (4.8) | 12.2 (7) |
| Difference | 5.5 (6) | 10.1 (5.2) | 9.2 (6.6) |
| A/A | |||
| Baseline | 22.8 (4.5) | 21.9 (3.6) | 21.6 (4.2) |
| Endpoint | 16.5 (8.9) | 9.7 (6.3) | 13.4 (6.5) |
| Difference | 6.3 (8.5) | 12.2 (7.1) | 8.3 (7) |
|
| |||
| T | |||
| Baseline | 23 (4.2) | 21.9 (3.5) | 21.9 (3.3) |
| Endpoint | 17.4 (8.6) | 10.6 (5.7) | 13.4 (5.8) |
| Difference | 5.6 (8.4) | 11.2 (6.6) | 8.6 (6.4) |
| C/C | |||
| Baseline | 21.7 (4) | 21.5 (4.2) | 21 (5.3) |
| Endpoint | 15 (7.9) | 9.2 (6.4) | 12.6 (7.7) |
| Difference | 6.7 (6.7) | 12.3 (6.5) | 8.4 (7.7) |
|
| |||
| A | |||
| Baseline | 23 (4.2) | 21.8 (3.5) | 22 (3.3) |
| Endpoint | 17.4 (8.6) | 10.5 (5.7) | 13.4 (5.8) |
| Difference | 5.6 (8.4) | 11.2 (6.5) | 8.5 (6.4) |
| G/G | |||
| Baseline | 21.7 (4) | 21.9 (4) | 21 (5.2) |
| Endpoint | 15 (7.9) | 9.5 (6.5) | 12.6 (7.7) |
| Difference | 6.7 (6.7) | 12.4 (6.7) | 8.4 (7.7) |
|
| |||
| A | |||
| Baseline | 22.2 (3.9) | 21.9 (3.9) | 21.7 (4.7) |
| Endpoint | 15.8 (8.6) | 9.6 (6.6) | 13.6 (6.8) |
| Difference | 6.4 (8.7) | 12.2 (7.4) | 8 (7.8) |
| G/G | |||
| Baseline | 23 (4.5) | 21.7 (3.4) | 21.5 (3.5) |
| Endpoint | 17.3 (8) | 10.8 (5.2) | 12.5 (6.3) |
| Difference | 5.6 (6.4) | 10.8 (5.7) | 8.9 (6) |
Data presented as mean (standard deviation) scores on the Hamilton Depression Rating Scale, 17-items (HDRS-17).
BDNF = brain-derived neurotrophic factor; COMT = catechol-o-methyltransferase;
SLC6A4 = solute carrier family 6, member 4; tDCS = transcranial direct current stimulation; TPH1 = tryptophan hydroxylase 1.