| Literature DB >> 31709092 |
Kazuma Gotoh1, Hiroyuki Ishida1.
Abstract
The structures of two isomeric com-pounds of 5-nitro-quinoline with chloro- and nitro-substituted benzoic acid, namely, 2-chloro-4-nitro-benzoic acid-5-nitro-quinoline (1/1), (I), and 5-chloro-2-nitro-benzoic acid-5-nitro-quinoline (1/1), (II), both C7H4ClNO4·C9H6N2O2, have been determined at 190 K. In each com-pound, the acid and base mol-ecules are held together by an O-H⋯N hydrogen bond. In the crystal of (I), the hydrogen-bonded acid-base units are linked by a C-H⋯O hydrogen bond, forming a tape structure along [10]. The tapes are stacked into a layer parallel to the ab plane via N-O⋯π inter-actions between the nitro group of the base mol-ecule and the quinoline ring system. The layers are further linked by other C-H⋯O hydrogen bonds, forming a three-dimensional network. In the crystal of (II), the hydrogen-bonded acid-base units are linked into a wide ribbon structure running along [10] via C-H⋯O hydrogen bonds. The ribbons are further linked via another C-H⋯O hydrogen bond, forming a layer parallel to (110). Weak π-π inter-actions [centroid-centroid distances of 3.7080 (10) and 3.7543 (9) Å] are observed between the quinoline ring systems of adjacent layers. Hirshfeld surfaces for the 5-nitro-quinoline mol-ecules of the two com-pounds mapped over shape index and d norm were generated to visualize the weak inter-molecular inter-actions. © Gotoh and Ishida 2019.Entities:
Keywords: 2-chloro-4-nitrobenzoic acid; 5-chloro-2-nitrobenzoic acid; 5-nitroquinoline; Hirshfeld surface; crystal structure; hydrogen bond
Year: 2019 PMID: 31709092 PMCID: PMC6829746 DOI: 10.1107/S2056989019013896
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
Figure 1The molecular structure of (I), showing the atom-numbering scheme. Displacement ellipsoids are drawn at the 50% probability level and H atoms are shown as small spheres of arbitrary radii. The O—H⋯N hydrogen bond is indicated by a dashed line.
Hydrogen-bond geometry (Å, °) for (I)
Cg3 and Cg4 are the centroids of the C11–C16 ring and the N2/C8–C16 ring system, respectively.
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O1—H1⋯N2 | 1.02 (8) | 1.58 (7) | 2.585 (5) | 168 (7) |
| C8—H8⋯O2i | 0.95 | 2.59 | 3.174 (6) | 120 |
| C9—H9⋯O2i | 0.95 | 2.56 | 3.152 (6) | 120 |
| C13—H13⋯O4ii | 0.95 | 2.52 | 3.289 (6) | 138 |
| N3—O5⋯ | 1.23 (1) | 3.06 (1) | 3.724 (4) | 113 (1) |
| N3—O5⋯ | 1.23 (1) | 3.25 (1) | 4.118 (4) | 128 (1) |
Symmetry codes: (i) ; (ii) ; (iii) .
Figure 2The molecular structure of (II), showing the atom-numbering scheme. Displacement ellipsoids are drawn at the 50% probability level and H atoms are shown as small spheres of arbitrary radii. The O—H⋯N hydrogen bond is indicated by a dashed line.
Hydrogen-bond geometry (Å, °) for (II)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O1—H1⋯N2 | 0.99 (4) | 1.66 (4) | 2.6405 (17) | 169 (3) |
| C3—H3⋯O4i | 0.95 | 2.49 | 3.408 (3) | 162 |
| C10—H10⋯O3ii | 0.95 | 2.54 | 3.254 (2) | 132 |
| C13—H13⋯O2iii | 0.95 | 2.59 | 3.190 (2) | 121 |
| C14—H14⋯O2iii | 0.95 | 2.56 | 3.173 (2) | 122 |
Symmetry codes: (i) ; (ii) ; (iii) .
Figure 3A packing diagram of (I), showing the hydrogen-bonded tape structure formed via O—H⋯N and C—H⋯O hydrogen bonds (green dashed lines), and N—O⋯π interactions (magenta dashed lines) between the tapes. The N—O⋯π interactions including the centroid of the ten-membered quinoline ring system (Cg4) have been omitted for clarity. [Symmetry codes: (ii) x − 1, y + 2, z; (iii) x, y + 1, −z + 1.]
Figure 4A packing diagram of (II), showing the wide ribbon structure running along [10] formed by O—H⋯N and C—H⋯O hydrogen bonds (green dashed lines). [Symmetry codes: (i) −x + 2, −y, −z; (iii) x − 1, y + 1, z.]
Figure 5Hirshfeld surfaces [front (top) and back (bottom) views] for the 5-nitroquinoline molecule of (I) mapped over shape index and d norm, indicating the C—H⋯O [arrows (1)–(3)] and N—O⋯π [arrows (4)] interactions.
Figure 6Hirshfeld surfaces [front (top) and back (bottom) views] for the 5-nitroquinoline molecule of (II) mapped over shape index and d norm, indicating the C—H⋯O [arrows (1)–(3)] and π–π [arrow (4)] interactions.
Experimental details
| (I) | (II) | |
|---|---|---|
| Crystal data | ||
| Chemical formula | C7H4ClNO4·C9H6N2O2 | C7H4ClNO4·C9H6N2O2 |
|
| 375.72 | 375.72 |
| Crystal system, space group | Monoclinic, | Triclinic, |
| Temperature (K) | 190 | 190 |
|
| 12.8265 (13), 4.7699 (5), 13.5033 (16) | 7.6682 (6), 8.6515 (8), 12.8609 (10) |
| α, β, γ (°) | 90, 109.713 (3), 90 | 79.170 (3), 78.968 (2), 70.394 (3) |
|
| 777.73 (15) | 781.80 (11) |
|
| 2 | 2 |
| Radiation type | Mo | Mo |
| μ (mm−1) | 0.29 | 0.29 |
| Crystal size (mm) | 0.37 × 0.18 × 0.10 | 0.26 × 0.20 × 0.18 |
| Data collection | ||
| Diffractometer | Rigaku R-AXIS RAPID | Rigaku R-AXIS RAPID |
| Absorption correction | Numerical ( | Numerical ( |
|
| 0.913, 0.972 | 0.933, 0.950 |
| No. of measured, independent and observed [ | 14435, 4168, 2859 | 9772, 4502, 3075 |
|
| 0.058 | 0.055 |
| (sin θ/λ)max (Å−1) | 0.703 | 0.703 |
| Refinement | ||
|
| 0.056, 0.169, 1.05 | 0.052, 0.148, 1.09 |
| No. of reflections | 4168 | 4502 |
| No. of parameters | 239 | 239 |
| No. of restraints | 1 | 0 |
| H-atom treatment | H atoms treated by a mixture of independent and constrained refinement | H atoms treated by a mixture of independent and constrained refinement |
| Δρmax, Δρmin (e Å−3) | 0.34, −0.65 | 0.42, −0.39 |
| Absolute structure | Flack | – |
| Absolute structure parameter | 0.01 (6) | – |
Computer programs: PROCESS-AUTO (Rigaku, 2006 ▸), SHELXT2018 (Sheldrick, 2015a ▸), SHELXL2018 (Sheldrick, 2015b ▸), ORTEP-3 for Windows (Farrugia, 2012 ▸), Mercury (Macrae et al., 2008 ▸), CrystalStructure (Rigaku, 2018 ▸) and PLATON (Spek, 2015 ▸).
| C7H4ClNO4·C9H6N2O2 | |
| Monoclinic, | Mo |
| Cell parameters from 11483 reflections | |
| θ = 3.1–30.0° | |
| µ = 0.29 mm−1 | |
| β = 109.713 (3)° | |
| Block, colorless | |
| 0.37 × 0.18 × 0.10 mm |
| Rigaku R-AXIS RAPID diffractometer | 2859 reflections with |
| Detector resolution: 10.000 pixels mm-1 | |
| ω scans | θmax = 30.0°, θmin = 3.1° |
| Absorption correction: numerical (NUMABS; Higashi, 1999) | |
| 14435 measured reflections | |
| 4168 independent reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: mixed |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 4168 reflections | Δρmax = 0.34 e Å−3 |
| 239 parameters | Δρmin = −0.64 e Å−3 |
| 1 restraint | Absolute structure: Flack |
| Primary atom site location: structure-invariant direct methods | Absolute structure parameter: 0.01 (6) |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Cl1 | 0.57519 (8) | 0.0684 (3) | 0.43612 (8) | 0.0493 (3) | |
| O1 | 0.5077 (3) | 0.4634 (8) | 0.2687 (3) | 0.0477 (8) | |
| O2 | 0.5751 (3) | 0.4867 (9) | 0.1386 (3) | 0.0558 (10) | |
| O3 | 0.9097 (3) | −0.5701 (8) | 0.4815 (3) | 0.0521 (8) | |
| O4 | 0.9774 (2) | −0.4811 (7) | 0.3586 (3) | 0.0484 (8) | |
| O5 | 0.0470 (2) | 1.5716 (7) | 0.0857 (3) | 0.0485 (7) | |
| O6 | −0.0635 (2) | 1.3007 (9) | 0.1321 (3) | 0.0555 (9) | |
| N1 | 0.9100 (3) | −0.4421 (8) | 0.4027 (3) | 0.0383 (7) | |
| N2 | 0.3733 (3) | 0.8494 (8) | 0.1655 (3) | 0.0372 (8) | |
| N3 | 0.0279 (3) | 1.3624 (8) | 0.1297 (3) | 0.0410 (8) | |
| C1 | 0.6593 (3) | 0.1676 (9) | 0.2761 (3) | 0.0338 (8) | |
| C2 | 0.6664 (3) | 0.0245 (9) | 0.3678 (3) | 0.0369 (9) | |
| C3 | 0.7492 (3) | −0.1771 (10) | 0.4099 (3) | 0.0381 (9) | |
| H3 | 0.753753 | −0.276100 | 0.472305 | 0.046* | |
| C4 | 0.8238 (3) | −0.2282 (9) | 0.3586 (3) | 0.0365 (8) | |
| C5 | 0.8196 (3) | −0.0934 (10) | 0.2676 (3) | 0.0381 (9) | |
| H5 | 0.871190 | −0.135533 | 0.233150 | 0.046* | |
| C6 | 0.7376 (3) | 0.1061 (9) | 0.2273 (3) | 0.0371 (9) | |
| H6 | 0.734210 | 0.204031 | 0.165071 | 0.045* | |
| C7 | 0.5754 (3) | 0.3898 (9) | 0.2214 (3) | 0.0364 (9) | |
| C8 | 0.3804 (3) | 0.9609 (11) | 0.0786 (3) | 0.0411 (10) | |
| H8 | 0.438654 | 0.903116 | 0.054610 | 0.049* | |
| C9 | 0.3047 (4) | 1.1621 (10) | 0.0206 (3) | 0.0424 (10) | |
| H9 | 0.313962 | 1.243052 | −0.040174 | 0.051* | |
| C10 | 0.2177 (3) | 1.2428 (10) | 0.0506 (3) | 0.0389 (9) | |
| H10 | 0.165082 | 1.375120 | 0.010283 | 0.047* | |
| C11 | 0.2075 (3) | 1.1243 (8) | 0.1438 (3) | 0.0341 (9) | |
| C12 | 0.1202 (3) | 1.1733 (9) | 0.1847 (3) | 0.0371 (9) | |
| C13 | 0.1160 (3) | 1.0509 (11) | 0.2741 (3) | 0.0402 (9) | |
| H13 | 0.057188 | 1.093775 | 0.299480 | 0.048* | |
| C14 | 0.1991 (4) | 0.8605 (10) | 0.3290 (3) | 0.0435 (10) | |
| H14 | 0.196326 | 0.774460 | 0.391516 | 0.052* | |
| C15 | 0.2838 (3) | 0.7987 (10) | 0.2925 (3) | 0.0411 (10) | |
| H15 | 0.339701 | 0.669393 | 0.329616 | 0.049* | |
| C16 | 0.2884 (3) | 0.9272 (9) | 0.1997 (3) | 0.0343 (8) | |
| H1 | 0.463 (5) | 0.632 (17) | 0.231 (5) | 0.09 (2)* |
| Cl1 | 0.0495 (5) | 0.0641 (7) | 0.0462 (5) | 0.0116 (6) | 0.0317 (4) | 0.0062 (5) |
| O1 | 0.0504 (17) | 0.0543 (19) | 0.0481 (18) | 0.0154 (16) | 0.0296 (14) | 0.0074 (15) |
| O2 | 0.0569 (18) | 0.072 (3) | 0.0509 (18) | 0.0215 (19) | 0.0349 (16) | 0.0194 (17) |
| O3 | 0.0518 (17) | 0.053 (2) | 0.058 (2) | 0.0071 (17) | 0.0268 (15) | 0.0135 (17) |
| O4 | 0.0453 (15) | 0.051 (2) | 0.0562 (18) | 0.0121 (16) | 0.0265 (14) | −0.0026 (15) |
| O5 | 0.0488 (16) | 0.0386 (16) | 0.0605 (18) | 0.0045 (17) | 0.0214 (14) | 0.0071 (17) |
| O6 | 0.0395 (16) | 0.075 (3) | 0.059 (2) | 0.0106 (18) | 0.0262 (14) | 0.0093 (19) |
| N1 | 0.0357 (15) | 0.0351 (17) | 0.0474 (18) | 0.0017 (17) | 0.0183 (13) | −0.0015 (17) |
| N2 | 0.0367 (16) | 0.0413 (19) | 0.0407 (18) | 0.0012 (16) | 0.0221 (14) | −0.0009 (15) |
| N3 | 0.0418 (18) | 0.044 (2) | 0.0441 (19) | 0.0080 (17) | 0.0230 (16) | −0.0009 (16) |
| C1 | 0.0354 (19) | 0.0340 (19) | 0.0375 (19) | −0.0036 (17) | 0.0196 (16) | −0.0050 (16) |
| C2 | 0.0375 (17) | 0.042 (2) | 0.0383 (19) | −0.0025 (19) | 0.0218 (15) | −0.0042 (18) |
| C3 | 0.040 (2) | 0.040 (2) | 0.039 (2) | 0.0023 (19) | 0.0194 (16) | 0.0000 (18) |
| C4 | 0.0366 (19) | 0.033 (2) | 0.043 (2) | 0.0024 (18) | 0.0178 (16) | −0.0027 (17) |
| C5 | 0.0365 (19) | 0.042 (2) | 0.043 (2) | 0.0039 (18) | 0.0229 (17) | −0.0003 (18) |
| C6 | 0.0378 (19) | 0.043 (2) | 0.0368 (18) | −0.0002 (19) | 0.0206 (16) | −0.0005 (18) |
| C7 | 0.0346 (18) | 0.039 (2) | 0.041 (2) | 0.0002 (18) | 0.0197 (16) | −0.0029 (17) |
| C8 | 0.0389 (19) | 0.050 (2) | 0.042 (2) | 0.001 (2) | 0.0235 (18) | −0.0018 (19) |
| C9 | 0.045 (2) | 0.051 (3) | 0.039 (2) | 0.000 (2) | 0.0238 (18) | 0.0054 (18) |
| C10 | 0.041 (2) | 0.042 (2) | 0.037 (2) | −0.0007 (19) | 0.0179 (16) | 0.0021 (18) |
| C11 | 0.0347 (18) | 0.036 (2) | 0.0365 (18) | −0.0015 (17) | 0.0181 (15) | −0.0025 (16) |
| C12 | 0.036 (2) | 0.037 (2) | 0.043 (2) | 0.0049 (17) | 0.0197 (17) | −0.0022 (17) |
| C13 | 0.0387 (18) | 0.046 (2) | 0.044 (2) | 0.002 (2) | 0.0254 (16) | −0.004 (2) |
| C14 | 0.045 (2) | 0.053 (3) | 0.041 (2) | 0.003 (2) | 0.0243 (17) | 0.002 (2) |
| C15 | 0.041 (2) | 0.047 (2) | 0.042 (2) | 0.009 (2) | 0.0223 (17) | 0.007 (2) |
| C16 | 0.0344 (17) | 0.036 (2) | 0.0374 (19) | 0.0017 (17) | 0.0187 (15) | 0.0009 (16) |
| Cl1—C2 | 1.729 (4) | C5—C6 | 1.386 (6) |
| O1—C7 | 1.288 (5) | C5—H5 | 0.9500 |
| O1—H1 | 1.02 (8) | C6—H6 | 0.9500 |
| O2—C7 | 1.209 (5) | C8—C9 | 1.402 (7) |
| O3—N1 | 1.228 (5) | C8—H8 | 0.9500 |
| O4—N1 | 1.218 (4) | C9—C10 | 1.365 (5) |
| O5—N3 | 1.228 (5) | C9—H9 | 0.9500 |
| O6—N3 | 1.220 (4) | C10—C11 | 1.425 (5) |
| N1—C4 | 1.474 (5) | C10—H10 | 0.9500 |
| N2—C8 | 1.320 (5) | C11—C16 | 1.415 (6) |
| N2—C16 | 1.370 (4) | C11—C12 | 1.425 (5) |
| N3—C12 | 1.474 (5) | C12—C13 | 1.359 (6) |
| C1—C2 | 1.390 (6) | C13—C14 | 1.406 (6) |
| C1—C6 | 1.405 (5) | C13—H13 | 0.9500 |
| C1—C7 | 1.514 (6) | C14—C15 | 1.369 (5) |
| C2—C3 | 1.403 (6) | C14—H14 | 0.9500 |
| C3—C4 | 1.380 (5) | C15—C16 | 1.413 (5) |
| C3—H3 | 0.9500 | C15—H15 | 0.9500 |
| C4—C5 | 1.372 (6) | ||
| C7—O1—H1 | 109 (4) | O1—C7—C1 | 115.9 (4) |
| O4—N1—O3 | 123.9 (4) | N2—C8—C9 | 122.0 (4) |
| O4—N1—C4 | 117.9 (4) | N2—C8—H8 | 119.0 |
| O3—N1—C4 | 118.2 (3) | C9—C8—H8 | 119.0 |
| C8—N2—C16 | 119.5 (4) | C10—C9—C8 | 120.6 (4) |
| O6—N3—O5 | 124.0 (4) | C10—C9—H9 | 119.7 |
| O6—N3—C12 | 117.1 (4) | C8—C9—H9 | 119.7 |
| O5—N3—C12 | 118.9 (3) | C9—C10—C11 | 118.6 (4) |
| C2—C1—C6 | 118.2 (4) | C9—C10—H10 | 120.7 |
| C2—C1—C7 | 126.9 (3) | C11—C10—H10 | 120.7 |
| C6—C1—C7 | 114.8 (3) | C16—C11—C12 | 115.6 (3) |
| C1—C2—C3 | 120.7 (3) | C16—C11—C10 | 117.8 (3) |
| C1—C2—Cl1 | 124.3 (3) | C12—C11—C10 | 126.5 (4) |
| C3—C2—Cl1 | 115.0 (3) | C13—C12—C11 | 123.1 (4) |
| C4—C3—C2 | 118.4 (4) | C13—C12—N3 | 116.4 (3) |
| C4—C3—H3 | 120.8 | C11—C12—N3 | 120.5 (4) |
| C2—C3—H3 | 120.8 | C12—C13—C14 | 119.7 (3) |
| C5—C4—C3 | 122.9 (4) | C12—C13—H13 | 120.1 |
| C5—C4—N1 | 118.9 (3) | C14—C13—H13 | 120.1 |
| C3—C4—N1 | 118.2 (4) | C15—C14—C13 | 120.2 (4) |
| C4—C5—C6 | 117.9 (3) | C15—C14—H14 | 119.9 |
| C4—C5—H5 | 121.0 | C13—C14—H14 | 119.9 |
| C6—C5—H5 | 121.0 | C14—C15—C16 | 120.0 (4) |
| C5—C6—C1 | 121.8 (4) | C14—C15—H15 | 120.0 |
| C5—C6—H6 | 119.1 | C16—C15—H15 | 120.0 |
| C1—C6—H6 | 119.1 | N2—C16—C15 | 117.2 (4) |
| O2—C7—O1 | 124.2 (4) | N2—C16—C11 | 121.5 (4) |
| O2—C7—C1 | 119.9 (4) | C15—C16—C11 | 121.3 (3) |
| C6—C1—C2—C3 | −0.4 (6) | C8—C9—C10—C11 | 1.8 (7) |
| C7—C1—C2—C3 | −179.9 (4) | C9—C10—C11—C16 | −0.4 (6) |
| C6—C1—C2—Cl1 | −178.5 (3) | C9—C10—C11—C12 | −177.1 (4) |
| C7—C1—C2—Cl1 | 2.1 (6) | C16—C11—C12—C13 | 2.9 (6) |
| C1—C2—C3—C4 | 0.5 (6) | C10—C11—C12—C13 | 179.7 (4) |
| Cl1—C2—C3—C4 | 178.7 (3) | C16—C11—C12—N3 | −176.6 (4) |
| C2—C3—C4—C5 | −1.0 (7) | C10—C11—C12—N3 | 0.2 (6) |
| C2—C3—C4—N1 | −179.4 (4) | O6—N3—C12—C13 | −34.6 (6) |
| O4—N1—C4—C5 | 3.3 (6) | O5—N3—C12—C13 | 144.6 (4) |
| O3—N1—C4—C5 | −176.7 (4) | O6—N3—C12—C11 | 144.9 (4) |
| O4—N1—C4—C3 | −178.1 (4) | O5—N3—C12—C11 | −35.9 (6) |
| O3—N1—C4—C3 | 1.8 (6) | C11—C12—C13—C14 | −1.7 (7) |
| C3—C4—C5—C6 | 1.3 (7) | N3—C12—C13—C14 | 177.8 (4) |
| N1—C4—C5—C6 | 179.7 (4) | C12—C13—C14—C15 | 0.0 (7) |
| C4—C5—C6—C1 | −1.2 (6) | C13—C14—C15—C16 | 0.2 (7) |
| C2—C1—C6—C5 | 0.8 (6) | C8—N2—C16—C15 | 179.2 (4) |
| C7—C1—C6—C5 | −179.7 (4) | C8—N2—C16—C11 | 0.2 (6) |
| C2—C1—C7—O2 | −176.0 (4) | C14—C15—C16—N2 | −177.9 (4) |
| C6—C1—C7—O2 | 4.5 (6) | C14—C15—C16—C11 | 1.1 (7) |
| C2—C1—C7—O1 | 4.2 (6) | C12—C11—C16—N2 | 176.4 (4) |
| C6—C1—C7—O1 | −175.3 (4) | C10—C11—C16—N2 | −0.7 (6) |
| C16—N2—C8—C9 | 1.3 (7) | C12—C11—C16—C15 | −2.6 (6) |
| N2—C8—C9—C10 | −2.4 (7) | C10—C11—C16—C15 | −179.6 (4) |
| H··· | ||||
| O1—H1···N2 | 1.02 (8) | 1.58 (7) | 2.585 (5) | 168 (7) |
| C8—H8···O2i | 0.95 | 2.59 | 3.174 (6) | 120 |
| C9—H9···O2i | 0.95 | 2.56 | 3.152 (6) | 120 |
| C13—H13···O4ii | 0.95 | 2.52 | 3.289 (6) | 138 |
| N3—O5··· | 1.23 (1) | 3.06 (1) | 3.724 (4) | 113 (1) |
| N3—O5··· | 1.23 (1) | 3.25 (1) | 4.118 (4) | 128 (1) |
| C7H4ClNO4·C9H6N2O2 | |
| Triclinic, | |
| Mo | |
| Cell parameters from 7062 reflections | |
| θ = 3.1–30.1° | |
| α = 79.170 (3)° | µ = 0.29 mm−1 |
| β = 78.968 (2)° | |
| γ = 70.394 (3)° | Block, colorless |
| 0.26 × 0.20 × 0.18 mm |
| Rigaku R-AXIS RAPID diffractometer | 3075 reflections with |
| Detector resolution: 10.000 pixels mm-1 | |
| ω scans | θmax = 30.0°, θmin = 3.1° |
| Absorption correction: numerical (NUMABS; Higashi, 1999) | |
| 9772 measured reflections | |
| 4502 independent reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: mixed | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 4502 reflections | (Δ/σ)max < 0.001 |
| 239 parameters | Δρmax = 0.42 e Å−3 |
| 0 restraints | Δρmin = −0.39 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Reflections were merged by SHELXL according to the crystal class for the calculation of statistics and refinement. _reflns_Friedel_fraction is defined as the number of unique Friedel pairs measured divided by the number that would be possible theoretically, ignoring centric projections and systematic absences. |
| Cl1 | 0.14420 (7) | 0.28783 (7) | −0.10243 (4) | 0.05199 (18) | |
| O1 | 0.27021 (17) | 0.49296 (15) | 0.23397 (9) | 0.0398 (3) | |
| O2 | 0.49601 (18) | 0.27221 (17) | 0.29240 (9) | 0.0464 (3) | |
| O3 | 0.7904 (2) | 0.35306 (18) | 0.13902 (11) | 0.0517 (4) | |
| O4 | 0.91612 (19) | 0.09724 (19) | 0.11445 (12) | 0.0560 (4) | |
| O5 | −0.2211 (2) | 0.9235 (2) | 0.73000 (11) | 0.0588 (4) | |
| O6 | −0.3859 (2) | 1.13276 (19) | 0.63614 (12) | 0.0585 (4) | |
| N1 | 0.78959 (19) | 0.22747 (19) | 0.10917 (11) | 0.0375 (3) | |
| N2 | 0.18718 (18) | 0.57290 (17) | 0.42980 (10) | 0.0304 (3) | |
| N3 | −0.2703 (2) | 0.99626 (19) | 0.64474 (12) | 0.0363 (3) | |
| C1 | 0.4473 (2) | 0.31055 (18) | 0.11065 (11) | 0.0280 (3) | |
| C2 | 0.6260 (2) | 0.2358 (2) | 0.06195 (12) | 0.0311 (3) | |
| C3 | 0.6607 (3) | 0.1738 (2) | −0.03429 (13) | 0.0394 (4) | |
| H3 | 0.785039 | 0.121041 | −0.064631 | 0.047* | |
| C4 | 0.5112 (3) | 0.1900 (2) | −0.08550 (13) | 0.0405 (4) | |
| H4 | 0.531267 | 0.149424 | −0.151912 | 0.049* | |
| C5 | 0.3327 (2) | 0.2660 (2) | −0.03861 (12) | 0.0347 (4) | |
| C6 | 0.2973 (2) | 0.3264 (2) | 0.05903 (12) | 0.0322 (3) | |
| H6 | 0.172692 | 0.377559 | 0.089801 | 0.039* | |
| C7 | 0.4089 (2) | 0.3576 (2) | 0.22188 (12) | 0.0289 (3) | |
| C8 | 0.2766 (2) | 0.4942 (2) | 0.51114 (13) | 0.0338 (4) | |
| H8 | 0.379851 | 0.397342 | 0.501163 | 0.041* | |
| C9 | 0.2254 (2) | 0.5479 (2) | 0.61268 (13) | 0.0360 (4) | |
| H9 | 0.295494 | 0.488936 | 0.669132 | 0.043* | |
| C10 | 0.0752 (2) | 0.6842 (2) | 0.62990 (12) | 0.0329 (4) | |
| H10 | 0.039659 | 0.720138 | 0.698459 | 0.039* | |
| C11 | −0.0277 (2) | 0.77237 (19) | 0.54485 (11) | 0.0262 (3) | |
| C12 | −0.1866 (2) | 0.9174 (2) | 0.54633 (12) | 0.0287 (3) | |
| C13 | −0.2716 (2) | 0.9935 (2) | 0.45823 (13) | 0.0335 (3) | |
| H13 | −0.376955 | 1.090140 | 0.462933 | 0.040* | |
| C14 | −0.2037 (2) | 0.9294 (2) | 0.36000 (13) | 0.0364 (4) | |
| H14 | −0.264213 | 0.981948 | 0.298918 | 0.044* | |
| C15 | −0.0520 (2) | 0.7928 (2) | 0.35311 (12) | 0.0335 (4) | |
| H15 | −0.005289 | 0.751029 | 0.286601 | 0.040* | |
| C16 | 0.0378 (2) | 0.71153 (19) | 0.44377 (11) | 0.0269 (3) | |
| H1 | 0.249 (4) | 0.510 (4) | 0.310 (3) | 0.097 (9)* |
| Cl1 | 0.0591 (3) | 0.0735 (4) | 0.0357 (3) | −0.0300 (3) | −0.0154 (2) | −0.0106 (2) |
| O1 | 0.0383 (7) | 0.0413 (7) | 0.0295 (6) | 0.0079 (5) | −0.0075 (5) | −0.0150 (5) |
| O2 | 0.0500 (8) | 0.0468 (8) | 0.0289 (6) | 0.0086 (6) | −0.0146 (5) | −0.0075 (5) |
| O3 | 0.0544 (8) | 0.0521 (9) | 0.0544 (8) | −0.0177 (7) | −0.0210 (7) | −0.0056 (7) |
| O4 | 0.0337 (7) | 0.0574 (10) | 0.0559 (8) | 0.0116 (6) | −0.0050 (6) | −0.0061 (7) |
| O5 | 0.0689 (10) | 0.0644 (10) | 0.0325 (7) | −0.0043 (8) | 0.0003 (7) | −0.0192 (7) |
| O6 | 0.0579 (9) | 0.0479 (9) | 0.0567 (9) | 0.0053 (7) | −0.0009 (7) | −0.0234 (7) |
| N1 | 0.0296 (7) | 0.0450 (9) | 0.0289 (7) | −0.0034 (6) | −0.0018 (5) | −0.0007 (6) |
| N2 | 0.0294 (6) | 0.0313 (7) | 0.0293 (6) | −0.0064 (5) | −0.0030 (5) | −0.0079 (5) |
| N3 | 0.0347 (8) | 0.0400 (8) | 0.0355 (7) | −0.0129 (6) | 0.0037 (6) | −0.0147 (6) |
| C1 | 0.0310 (8) | 0.0252 (7) | 0.0227 (7) | −0.0023 (6) | −0.0029 (6) | −0.0038 (6) |
| C2 | 0.0302 (8) | 0.0287 (8) | 0.0288 (7) | −0.0030 (6) | −0.0037 (6) | −0.0022 (6) |
| C3 | 0.0409 (9) | 0.0378 (9) | 0.0310 (8) | −0.0029 (7) | 0.0048 (7) | −0.0111 (7) |
| C4 | 0.0538 (11) | 0.0396 (10) | 0.0275 (8) | −0.0120 (8) | −0.0001 (7) | −0.0130 (7) |
| C5 | 0.0455 (10) | 0.0364 (9) | 0.0252 (7) | −0.0145 (7) | −0.0090 (7) | −0.0040 (7) |
| C6 | 0.0324 (8) | 0.0343 (8) | 0.0262 (7) | −0.0045 (7) | −0.0042 (6) | −0.0057 (6) |
| C7 | 0.0285 (7) | 0.0313 (8) | 0.0244 (7) | −0.0035 (6) | −0.0052 (6) | −0.0067 (6) |
| C8 | 0.0298 (8) | 0.0339 (9) | 0.0371 (8) | −0.0069 (7) | −0.0079 (6) | −0.0054 (7) |
| C9 | 0.0365 (9) | 0.0405 (9) | 0.0321 (8) | −0.0107 (7) | −0.0129 (7) | −0.0016 (7) |
| C10 | 0.0356 (8) | 0.0410 (9) | 0.0251 (7) | −0.0134 (7) | −0.0057 (6) | −0.0078 (7) |
| C11 | 0.0276 (7) | 0.0294 (8) | 0.0242 (7) | −0.0121 (6) | −0.0023 (5) | −0.0051 (6) |
| C12 | 0.0279 (7) | 0.0305 (8) | 0.0283 (7) | −0.0109 (6) | 0.0021 (6) | −0.0080 (6) |
| C13 | 0.0286 (8) | 0.0301 (8) | 0.0387 (9) | −0.0072 (6) | −0.0023 (6) | −0.0033 (7) |
| C14 | 0.0355 (9) | 0.0393 (9) | 0.0305 (8) | −0.0070 (7) | −0.0089 (7) | 0.0007 (7) |
| C15 | 0.0368 (9) | 0.0382 (9) | 0.0237 (7) | −0.0081 (7) | −0.0054 (6) | −0.0052 (6) |
| C16 | 0.0268 (7) | 0.0298 (8) | 0.0245 (7) | −0.0093 (6) | −0.0027 (6) | −0.0045 (6) |
| Cl1—C5 | 1.7351 (17) | C4—H4 | 0.9500 |
| O1—C7 | 1.3022 (18) | C5—C6 | 1.395 (2) |
| O1—H1 | 1.00 (3) | C6—H6 | 0.9500 |
| O2—C7 | 1.2098 (19) | C8—C9 | 1.409 (2) |
| O3—N1 | 1.2207 (19) | C8—H8 | 0.9500 |
| O4—N1 | 1.2158 (19) | C9—C10 | 1.362 (2) |
| O5—N3 | 1.217 (2) | C9—H9 | 0.9500 |
| O6—N3 | 1.216 (2) | C10—C11 | 1.419 (2) |
| N1—C2 | 1.470 (2) | C10—H10 | 0.9500 |
| N2—C8 | 1.312 (2) | C11—C12 | 1.426 (2) |
| N2—C16 | 1.365 (2) | C11—C16 | 1.431 (2) |
| N3—C12 | 1.4829 (19) | C12—C13 | 1.362 (2) |
| C1—C2 | 1.385 (2) | C13—C14 | 1.411 (2) |
| C1—C6 | 1.391 (2) | C13—H13 | 0.9500 |
| C1—C7 | 1.5085 (19) | C14—C15 | 1.355 (2) |
| C2—C3 | 1.385 (2) | C14—H14 | 0.9500 |
| C3—C4 | 1.384 (3) | C15—C16 | 1.415 (2) |
| C3—H3 | 0.9500 | C15—H15 | 0.9500 |
| C4—C5 | 1.378 (2) | ||
| C7—O1—H1 | 107.9 (18) | O1—C7—C1 | 113.35 (13) |
| O4—N1—O3 | 124.32 (16) | N2—C8—C9 | 122.56 (15) |
| O4—N1—C2 | 118.09 (15) | N2—C8—H8 | 118.7 |
| O3—N1—C2 | 117.58 (14) | C9—C8—H8 | 118.7 |
| C8—N2—C16 | 119.04 (13) | C10—C9—C8 | 119.96 (15) |
| O6—N3—O5 | 122.72 (14) | C10—C9—H9 | 120.0 |
| O6—N3—C12 | 117.87 (15) | C8—C9—H9 | 120.0 |
| O5—N3—C12 | 119.41 (15) | C9—C10—C11 | 119.64 (14) |
| C2—C1—C6 | 118.14 (13) | C9—C10—H10 | 120.2 |
| C2—C1—C7 | 122.53 (13) | C11—C10—H10 | 120.2 |
| C6—C1—C7 | 118.97 (13) | C10—C11—C12 | 128.17 (13) |
| C1—C2—C3 | 122.79 (15) | C10—C11—C16 | 116.46 (14) |
| C1—C2—N1 | 120.19 (13) | C12—C11—C16 | 115.35 (14) |
| C3—C2—N1 | 116.94 (14) | C13—C12—C11 | 122.78 (13) |
| C4—C3—C2 | 118.91 (16) | C13—C12—N3 | 115.36 (14) |
| C4—C3—H3 | 120.5 | C11—C12—N3 | 121.86 (14) |
| C2—C3—H3 | 120.5 | C12—C13—C14 | 120.30 (15) |
| C5—C4—C3 | 118.91 (14) | C12—C13—H13 | 119.9 |
| C5—C4—H4 | 120.5 | C14—C13—H13 | 119.9 |
| C3—C4—H4 | 120.5 | C15—C14—C13 | 119.77 (15) |
| C4—C5—C6 | 122.30 (15) | C15—C14—H14 | 120.1 |
| C4—C5—Cl1 | 119.31 (12) | C13—C14—H14 | 120.1 |
| C6—C5—Cl1 | 118.40 (13) | C14—C15—C16 | 120.81 (14) |
| C1—C6—C5 | 118.93 (15) | C14—C15—H15 | 119.6 |
| C1—C6—H6 | 120.5 | C16—C15—H15 | 119.6 |
| C5—C6—H6 | 120.5 | N2—C16—C15 | 116.71 (13) |
| O2—C7—O1 | 124.62 (13) | N2—C16—C11 | 122.30 (14) |
| O2—C7—C1 | 121.98 (14) | C15—C16—C11 | 120.99 (14) |
| C6—C1—C2—C3 | −1.3 (3) | C8—C9—C10—C11 | −0.6 (2) |
| C7—C1—C2—C3 | 171.77 (16) | C9—C10—C11—C12 | −179.44 (15) |
| C6—C1—C2—N1 | 175.37 (14) | C9—C10—C11—C16 | −1.2 (2) |
| C7—C1—C2—N1 | −11.5 (2) | C10—C11—C12—C13 | 178.45 (16) |
| O4—N1—C2—C1 | 135.40 (16) | C16—C11—C12—C13 | 0.2 (2) |
| O3—N1—C2—C1 | −45.7 (2) | C10—C11—C12—N3 | −1.3 (2) |
| O4—N1—C2—C3 | −47.7 (2) | C16—C11—C12—N3 | −179.55 (13) |
| O3—N1—C2—C3 | 131.17 (17) | O6—N3—C12—C13 | −11.0 (2) |
| C1—C2—C3—C4 | 1.4 (3) | O5—N3—C12—C13 | 169.25 (16) |
| N1—C2—C3—C4 | −175.35 (16) | O6—N3—C12—C11 | 168.68 (15) |
| C2—C3—C4—C5 | −0.6 (3) | O5—N3—C12—C11 | −11.0 (2) |
| C3—C4—C5—C6 | −0.3 (3) | C11—C12—C13—C14 | 0.2 (2) |
| C3—C4—C5—Cl1 | 179.69 (14) | N3—C12—C13—C14 | 179.91 (14) |
| C2—C1—C6—C5 | 0.4 (2) | C12—C13—C14—C15 | −0.8 (3) |
| C7—C1—C6—C5 | −172.98 (15) | C13—C14—C15—C16 | 1.1 (3) |
| C4—C5—C6—C1 | 0.4 (3) | C8—N2—C16—C15 | 179.18 (15) |
| Cl1—C5—C6—C1 | −179.59 (12) | C8—N2—C16—C11 | −1.4 (2) |
| C2—C1—C7—O2 | −37.4 (2) | C14—C15—C16—N2 | 178.69 (15) |
| C6—C1—C7—O2 | 135.67 (18) | C14—C15—C16—C11 | −0.7 (2) |
| C2—C1—C7—O1 | 145.23 (15) | C10—C11—C16—N2 | 2.2 (2) |
| C6—C1—C7—O1 | −41.7 (2) | C12—C11—C16—N2 | −179.29 (13) |
| C16—N2—C8—C9 | −0.5 (2) | C10—C11—C16—C15 | −178.39 (14) |
| N2—C8—C9—C10 | 1.5 (3) | C12—C11—C16—C15 | 0.1 (2) |
| H··· | ||||
| O1—H1···N2 | 0.99 (4) | 1.66 (4) | 2.6405 (17) | 169 (3) |
| C3—H3···O4i | 0.95 | 2.49 | 3.408 (3) | 162 |
| C10—H10···O3ii | 0.95 | 2.54 | 3.254 (2) | 132 |
| C13—H13···O2iii | 0.95 | 2.59 | 3.190 (2) | 121 |
| C14—H14···O2iii | 0.95 | 2.56 | 3.173 (2) | 122 |