Literature DB >> 31709092

Crystal structures of the two isomeric hydrogen-bonded cocrystals 2-chloro-4-nitro-benzoic acid-5-nitro-quinoline (1/1) and 5-chloro-2-nitro-benzoic acid-5-nitro-quinoline (1/1).

Kazuma Gotoh1, Hiroyuki Ishida1.   

Abstract

The structures of two isomeric com-pounds of 5-nitro-quinoline with chloro- and nitro-substituted benzoic acid, namely, 2-chloro-4-nitro-benzoic acid-5-nitro-quinoline (1/1), (I), and 5-chloro-2-nitro-benzoic acid-5-nitro-quinoline (1/1), (II), both C7H4ClNO4·C9H6N2O2, have been determined at 190 K. In each com-pound, the acid and base mol-ecules are held together by an O-H⋯N hydrogen bond. In the crystal of (I), the hydrogen-bonded acid-base units are linked by a C-H⋯O hydrogen bond, forming a tape structure along [10]. The tapes are stacked into a layer parallel to the ab plane via N-O⋯π inter-actions between the nitro group of the base mol-ecule and the quinoline ring system. The layers are further linked by other C-H⋯O hydrogen bonds, forming a three-dimensional network. In the crystal of (II), the hydrogen-bonded acid-base units are linked into a wide ribbon structure running along [10] via C-H⋯O hydrogen bonds. The ribbons are further linked via another C-H⋯O hydrogen bond, forming a layer parallel to (110). Weak π-π inter-actions [centroid-centroid distances of 3.7080 (10) and 3.7543 (9) Å] are observed between the quinoline ring systems of adjacent layers. Hirshfeld surfaces for the 5-nitro-quinoline mol-ecules of the two com-pounds mapped over shape index and d norm were generated to visualize the weak inter-molecular inter-actions. © Gotoh and Ishida 2019.

Entities:  

Keywords:  2-chloro-4-nitro­benzoic acid; 5-chloro-2-nitro­benzoic acid; 5-nitro­quinoline; Hirshfeld surface; crystal structure; hydrogen bond

Year:  2019        PMID: 31709092      PMCID: PMC6829746          DOI: 10.1107/S2056989019013896

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Chemical context

The properties of hydrogen bonds formed between organic acids and organic bases depend on the pK values of the acids and bases, as well as the inter­molecular inter­actions in the crystals. For the system of quinoline and chloro- and nitro-substituted benzoic acids, we have shown that three com­pounds of quinoline with 3-chloro-2-nitro­benzoic acid, 4-chloro-2-nitro­benzoic acid and 5-chloro-2-nitorbenzoic acid, the ΔpK [pK (base) – pK (acid)] values of which are 3.08, 2.93 and 3.04, respectively, have a short double-well O⋯H⋯N hydrogen bond between the carb­oxy O atom and the aromatic N atom (Gotoh & Ishida, 2009 ▸). Similar O⋯H⋯N hydrogen bonds have also been observed in com­pounds of phthalazine with 3-chloro-2-nitro­benzoic acid and 4-chloro-2-nitrobenzoic acid with ΔpK values of 1.65 and 1.50, respectively (Gotoh & Ishida, 2011a ▸), and of iso­quinoline with 3-chloro-2-nitro­benzoic acid with ΔpK = 3.58 (Gotoh & Ishida, 2015 ▸). On the other hand, in 2-chloro-4-nitro­benzoic acid–quinoline (1/1) with ΔpK = 2.86 (Gotoh & Ishida, 2011b ▸), 3-chloro-2-nitro­benzoic acid–5-nitro­quinoline (1/1) with ΔpK = 0.98, 3-chloro-2-nitro­benzoic acid–6-nitro­quinolune (1/1) with ΔpK = 1.42 and 8-hy­droxy­quinolinium 3-chloro-2-nitro­benzoate with ΔpK = 3.02 (Gotoh & Ishida, 2019 ▸), such a short disordered hydrogen bond was not observed, suggesting that the strength of the hydrogen bond between the acid O atom and the base N atom is strongly influenced by other weak inter­molecular inter­actions. We report here the crystal structures of the isomeric com­pounds 2-chloro-4-nitro­benzoic acid–5-nitro­quinoline (1/1) (ΔpK = 0.76) and 5-chloro-2-nitro­benzoic acid–5-nitro­quinoline (1/1) (ΔpK = 0.94), in order to extend our studies of short hydrogen bonding and weak inter­molecular inter­actions in the quinoline derivative–chloro- and nitro-substituted benzoic acid system.

Structural commentary

Compound (I) crystallizes in the noncentrosymmetric space group P21, where the acid and base mol­ecules are held together by an O—H⋯N hydrogen bond between the carb­oxy group and the N atom of the base (Fig. 1 ▸ and Table 1 ▸). The hydrogen-bonded acid–base unit is approximately planar; the quinoline ring system (N2/C8–C16) makes dihedral angles of 3.94 (17) and 7.5 (5)°, respectively, with the benzene ring (C1–C6) and the carb­oxy group (O1/C7/O2). In the acid mol­ecule, the benzene ring makes dihedral angles of 4.3 (5) and 2.5 (5)°, respectively, with the carb­oxy group and the nitro group (O3/N1/O4), while in the base mol­ecule, the quinoline ring system and the attached nitro group (O5/N3/O6) are somewhat twisted with a dihedral angle of 36.2 (5)°.
Figure 1

The mol­ecular structure of (I), showing the atom-numbering scheme. Displacement ellipsoids are drawn at the 50% probability level and H atoms are shown as small spheres of arbitrary radii. The O—H⋯N hydrogen bond is indicated by a dashed line.

Table 1

Hydrogen-bond geometry (Å, °) for (I)

Cg3 and Cg4 are the centroids of the C11–C16 ring and the N2/C8–C16 ring system, respectively.

D—H⋯A D—HH⋯A DA D—H⋯A
O1—H1⋯N21.02 (8)1.58 (7)2.585 (5)168 (7)
C8—H8⋯O2i 0.952.593.174 (6)120
C9—H9⋯O2i 0.952.563.152 (6)120
C13—H13⋯O4ii 0.952.523.289 (6)138
N3—O5⋯Cg3iii 1.23 (1)3.06 (1)3.724 (4)113 (1)
N3—O5⋯Cg4iii 1.23 (1)3.25 (1)4.118 (4)128 (1)

Symmetry codes: (i) ; (ii) ; (iii) .

The mol­ecular structure of (II) is shown in Fig. 2 ▸. Similar to (I), the acid and base mol­ecules are held together by an O—H⋯N hydrogen bond (Table 2 ▸). In the acid–base unit, the quinoline ring system and the hydrogen-bonded carb­oxy group are almost coplanar, with a dihedral angle of 2.9 (2)°, while the quinoline ring system and the benzene ring of the acid are twisted with respect to each other by a dihedral angle of 37.37 (6)°. In the acid mol­ecule, the benzene ring makes dihedral angles of 40.3 (2) and 47.12 (19)°, respectively, with the carb­oxy and nitro groups. In the base mol­ecule, the dihedral angle between the quinoline ring system and the attached nitro group is 11.3 (2)°.
Figure 2

The mol­ecular structure of (II), showing the atom-numbering scheme. Displacement ellipsoids are drawn at the 50% probability level and H atoms are shown as small spheres of arbitrary radii. The O—H⋯N hydrogen bond is indicated by a dashed line.

Table 2

Hydrogen-bond geometry (Å, °) for (II)

D—H⋯A D—HH⋯A DA D—H⋯A
O1—H1⋯N20.99 (4)1.66 (4)2.6405 (17)169 (3)
C3—H3⋯O4i 0.952.493.408 (3)162
C10—H10⋯O3ii 0.952.543.254 (2)132
C13—H13⋯O2iii 0.952.593.190 (2)121
C14—H14⋯O2iii 0.952.563.173 (2)122

Symmetry codes: (i) ; (ii) ; (iii) .

Supra­molecular features

In the crystal of (I), the hydrogen-bonded acid–base units are linked by a C—H⋯O hydrogen bond (C13—H13⋯O4ii; symmetry code as in Table 1 ▸), forming a tape structure along [10]. The tapes are stacked into a layer parallel to the ab plane (Fig. 3 ▸) via N—O⋯π contacts (N3—O5⋯Cg3iii and N3—O5⋯Cg4iii; Table 1 ▸) between the nitro group of the base and the quinoline ring system; Cg3 and Cg4 are the centroids of the C11–C16 ring and the N2/C8–C16 ring system of the base mol­ecule, respectively. The layers are further linked by other C—H⋯O hydrogen bonds (C8—H8⋯O2i and C9—H9⋯O2i; Table 1 ▸), forming a three-dimensional network.
Figure 3

A packing diagram of (I), showing the hydrogen-bonded tape structure formed via O—H⋯N and C—H⋯O hydrogen bonds (green dashed lines), and N—O⋯π inter­actions (magenta dashed lines) between the tapes. The N—O⋯π inter­actions including the centroid of the ten-membered quinoline ring system (Cg4) have been omitted for clarity. [Symmetry codes: (ii) x − 1, y + 2, z; (iii) x, y + 1, −z + 1.]

In the crystal of (II), the hydrogen-bonded acid–base units are linked into a wide ribbon structure running along [10] (Fig. 4 ▸) via C—H⋯O hydrogen bonds (C3—H3⋯O4i, C13—H13⋯O2iii and C14—H14⋯O2iii; symmetry codes as in Table 2 ▸); the mean plane of the non-H atoms in the ribbon is parallel to (773). The ribbons are further linked via another C—H⋯O hydrogen bond (C10—H10⋯O3ii; Table 2 ▸), forming a layer parallel to (110). Between the layers, weak π–π inter­actions are observed; the centroid–centroid distances are 3.7080 (10) and 3.7543 (9) Å, respectively, for Cg2⋯Cg2iv and Cg2⋯Cg4vi, where Cg2 and Cg4 are the centroids of the N2/C8–C11/C16 ring and the N2/C8–C16 ring system of the base mol­ecule, respectively [symmetry code: (iv) −x, −y + 1, −z + 1].
Figure 4

A packing diagram of (II), showing the wide ribbon structure running along [10] formed by O—H⋯N and C—H⋯O hydrogen bonds (green dashed lines). [Symmetry codes: (i) −x + 2, −y, −z; (iii) x − 1, y + 1, z.]

Hirshfeld surfaces for the 5-nitro­quinoline mol­ecules of (I) and (II), mapped over shape index and d norm (Turner et al., 2017 ▸; McKinnon et al., 2004 ▸, 2007 ▸), are shown in Figs. 5 ▸ and 6 ▸. The three C—H⋯O inter­actions in (I) (C8—H8⋯O2i, C9—H9⋯O2i and C13—H13⋯O4ii; Table 1 ▸) are viewed as faint-red spots on the d norm surfaces [arrows (1)–(3); Fig. 5 ▸]. In addition to these inter­actions, the N—O⋯π contacts (N3—O5⋯Cg3iii and N3—O5⋯Cg4iii; Table 1 ▸) are shown as broad blue and red regions, respectively, in the front and back views of shape-index surfaces [arrows (4)]. The three C—H⋯O inter­actions in (II) (C10—H10⋯O3ii, C13—H13⋯O2iii and C14—H14⋯O2iii; Table 2 ▸) are also represented as faint-red spots on the d norm surfaces [arrows (1)–(3); Fig. 6 ▸]. By contrast with the shape-index surfaces of (I), π–π inter­actions between the quinoline ring systems of inversion-related mol­ecules [Cg2⋯Cg2iv and Cg2⋯Cg4vi; symmetry code: (iv) −x, −y + 1, −z + 1] are indicated by blue and red triangles on the shape-index surface [arrow (4) in the front view of (II)].
Figure 5

Hirshfeld surfaces [front (top) and back (bottom) views] for the 5-nitro­quinoline mol­ecule of (I) mapped over shape index and d norm, indicating the C—H⋯O [arrows (1)–(3)] and N—O⋯π [arrows (4)] inter­actions.

Figure 6

Hirshfeld surfaces [front (top) and back (bottom) views] for the 5-nitro­quinoline mol­ecule of (II) mapped over shape index and d norm, indicating the C—H⋯O [arrows (1)–(3)] and π–π [arrow (4)] inter­actions.

Database survey

A search of the Cambridge Structural Database (Version 5.40, last update August 2019; Groom et al., 2016 ▸) for organic cocrystals/salts of 5-nitro­quinoline with carb­oxy­lic acid derivatives gave five structures, namely, 3-amino­benzoic acid–5-nitro­quinoline (1/1) (refcode PANYIM; Lynch et al., 1997 ▸), 4-animo­benzoic acid–5-nitro­quinoline (1/2) (PANZEJ; Lynch et al., 1997 ▸), indole-2-carb­oxy­lic acid–5-nitro­quinoline (1/2) (GISGUK; Lynch et al., 1998 ▸), indole-3-acetic acid–5-nitro­quinoline (1/2) (GISHAR: Lynch et al., 1998 ▸) and (2,4,5-tri­chloro­phen­oxy)acetic acid–5-nitro­quinoline (1/1) (XAP­WOA; Lynch et al., 1999 ▸). In these com­pounds, the dihedral angles between the quinoline ring system and the attached nitro group vary in the wide range 2.2 (4)–32.9 (4)°, which implies that the orientation of the nitro group is mainly affected by inter­molecular inter­actions. A search for organic cocrystals/salts of 2-chloro-4-nitro­benzoic acid with base mol­ecules gave 60 structures, while for organic cocrystals/salts of 5-chloro-2-nitro­benzoic acid with base mol­ecules, five com­pounds were reported. Limiting the search to quinoline derivatives of these com­pounds gave three com­pounds, namely, 2-chloro-4-nitro­benzoic acid–quinoline (1/1) (YAGFAP; Gotoh & Ishida, 2011b ▸), 8-hy­droxy­quinolinium 2-chloro-4-nitro­benzoate (WOPDEM; Babu & Chandrasekaran, 2014 ▸) and 5-chloro-2-nitro­benzoic acid–quinoline (1/1) (AJIXAT; Gotoh & Ishida, 2009 ▸).

Synthesis and crystallization

Crystals of com­pounds (I) and (II) were obtained by slow evaporation from aceto­nitrile solutions of 5-nitro­quinoline with chloro­nitro­benzoic acids in a 1:1 molar ratio at room temperature [80 ml aceto­nitrile solution of 5-nitro­quinoline (0.117 g) and 2-chloro-4-nitro­benzoic acid (0.135 g) for (I), and 50 ml aceto­nitrile solution of 5-nitro­quinoline (0.099 g) and 5-chloro-2-nitro­benzoic acid (0.112 g) for (II)].

Refinement

Crystal data, data collection, and structure refinement details are summarized in Table 3 ▸. All H atoms in com­pounds (I) and (II) were found in difference Fourier maps. H atoms on O atoms in (I) and (II) were refined freely, with distances of O1—H1 = 1.02 (8) Å in (I) and O1—H1 = 0.99 (4) Å in (II). Other H atoms were positioned geometrically (C—H = 0.95 Å) and treated as riding, with U iso(H) = 1.2U eq(C).
Table 3

Experimental details

 (I)(II)
Crystal data
Chemical formulaC7H4ClNO4·C9H6N2O2 C7H4ClNO4·C9H6N2O2
M r 375.72375.72
Crystal system, space groupMonoclinic, P21 Triclinic, P
Temperature (K)190190
a, b, c (Å)12.8265 (13), 4.7699 (5), 13.5033 (16)7.6682 (6), 8.6515 (8), 12.8609 (10)
α, β, γ (°)90, 109.713 (3), 9079.170 (3), 78.968 (2), 70.394 (3)
V3)777.73 (15)781.80 (11)
Z 22
Radiation typeMo KαMo Kα
μ (mm−1)0.290.29
Crystal size (mm)0.37 × 0.18 × 0.100.26 × 0.20 × 0.18
 
Data collection
DiffractometerRigaku R-AXIS RAPIDRigaku R-AXIS RAPID
Absorption correctionNumerical (NUMABS; Higashi, 1999)Numerical (NUMABS; Higashi, 1999)
T min, T max 0.913, 0.9720.933, 0.950
No. of measured, independent and observed [I > 2σ(I)] reflections14435, 4168, 28599772, 4502, 3075
R int 0.0580.055
(sin θ/λ)max−1)0.7030.703
 
Refinement
R[F 2 > 2σ(F 2)], wR(F 2), S 0.056, 0.169, 1.050.052, 0.148, 1.09
No. of reflections41684502
No. of parameters239239
No. of restraints10
H-atom treatmentH atoms treated by a mixture of independent and constrained refinementH atoms treated by a mixture of independent and constrained refinement
Δρmax, Δρmin (e Å−3)0.34, −0.650.42, −0.39
Absolute structureFlack x determined using 898 quotients [(I +) − (I )]/[(I +) + (I )] (Parsons et al., 2013)
Absolute structure parameter0.01 (6)

Computer programs: PROCESS-AUTO (Rigaku, 2006 ▸), SHELXT2018 (Sheldrick, 2015a ▸), SHELXL2018 (Sheldrick, 2015b ▸), ORTEP-3 for Windows (Farrugia, 2012 ▸), Mercury (Macrae et al., 2008 ▸), CrystalStructure (Rigaku, 2018 ▸) and PLATON (Spek, 2015 ▸).

Crystal structure: contains datablock(s) global, I, II. DOI: 10.1107/S2056989019013896/lh5931sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989019013896/lh5931Isup2.hkl Structure factors: contains datablock(s) II. DOI: 10.1107/S2056989019013896/lh5931IIsup3.hkl CCDC references: 1958672, 1958673, 1958672, 1958673 Additional supporting information: crystallographic information; 3D view; checkCIF report
C7H4ClNO4·C9H6N2O2F(000) = 384.00
Mr = 375.72Dx = 1.604 Mg m3
Monoclinic, P21Mo Kα radiation, λ = 0.71075 Å
a = 12.8265 (13) ÅCell parameters from 11483 reflections
b = 4.7699 (5) Åθ = 3.1–30.0°
c = 13.5033 (16) ŵ = 0.29 mm1
β = 109.713 (3)°T = 190 K
V = 777.73 (15) Å3Block, colorless
Z = 20.37 × 0.18 × 0.10 mm
Rigaku R-AXIS RAPID diffractometer2859 reflections with I > 2σ(I)
Detector resolution: 10.000 pixels mm-1Rint = 0.058
ω scansθmax = 30.0°, θmin = 3.1°
Absorption correction: numerical (NUMABS; Higashi, 1999)h = −17→18
Tmin = 0.913, Tmax = 0.972k = −6→6
14435 measured reflectionsl = −18→18
4168 independent reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: mixed
R[F2 > 2σ(F2)] = 0.056H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.169w = 1/[σ2(Fo2) + (0.0939P)2] where P = (Fo2 + 2Fc2)/3
S = 1.05(Δ/σ)max < 0.001
4168 reflectionsΔρmax = 0.34 e Å3
239 parametersΔρmin = −0.64 e Å3
1 restraintAbsolute structure: Flack x determined using 898 quotients [(I+)-(I-)]/[(I+)+(I-)] (Parsons et al., 2013)
Primary atom site location: structure-invariant direct methodsAbsolute structure parameter: 0.01 (6)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
xyzUiso*/Ueq
Cl10.57519 (8)0.0684 (3)0.43612 (8)0.0493 (3)
O10.5077 (3)0.4634 (8)0.2687 (3)0.0477 (8)
O20.5751 (3)0.4867 (9)0.1386 (3)0.0558 (10)
O30.9097 (3)−0.5701 (8)0.4815 (3)0.0521 (8)
O40.9774 (2)−0.4811 (7)0.3586 (3)0.0484 (8)
O50.0470 (2)1.5716 (7)0.0857 (3)0.0485 (7)
O6−0.0635 (2)1.3007 (9)0.1321 (3)0.0555 (9)
N10.9100 (3)−0.4421 (8)0.4027 (3)0.0383 (7)
N20.3733 (3)0.8494 (8)0.1655 (3)0.0372 (8)
N30.0279 (3)1.3624 (8)0.1297 (3)0.0410 (8)
C10.6593 (3)0.1676 (9)0.2761 (3)0.0338 (8)
C20.6664 (3)0.0245 (9)0.3678 (3)0.0369 (9)
C30.7492 (3)−0.1771 (10)0.4099 (3)0.0381 (9)
H30.753753−0.2761000.4723050.046*
C40.8238 (3)−0.2282 (9)0.3586 (3)0.0365 (8)
C50.8196 (3)−0.0934 (10)0.2676 (3)0.0381 (9)
H50.871190−0.1355330.2331500.046*
C60.7376 (3)0.1061 (9)0.2273 (3)0.0371 (9)
H60.7342100.2040310.1650710.045*
C70.5754 (3)0.3898 (9)0.2214 (3)0.0364 (9)
C80.3804 (3)0.9609 (11)0.0786 (3)0.0411 (10)
H80.4386540.9031160.0546100.049*
C90.3047 (4)1.1621 (10)0.0206 (3)0.0424 (10)
H90.3139621.243052−0.0401740.051*
C100.2177 (3)1.2428 (10)0.0506 (3)0.0389 (9)
H100.1650821.3751200.0102830.047*
C110.2075 (3)1.1243 (8)0.1438 (3)0.0341 (9)
C120.1202 (3)1.1733 (9)0.1847 (3)0.0371 (9)
C130.1160 (3)1.0509 (11)0.2741 (3)0.0402 (9)
H130.0571881.0937750.2994800.048*
C140.1991 (4)0.8605 (10)0.3290 (3)0.0435 (10)
H140.1963260.7744600.3915160.052*
C150.2838 (3)0.7987 (10)0.2925 (3)0.0411 (10)
H150.3397010.6693930.3296160.049*
C160.2884 (3)0.9272 (9)0.1997 (3)0.0343 (8)
H10.463 (5)0.632 (17)0.231 (5)0.09 (2)*
U11U22U33U12U13U23
Cl10.0495 (5)0.0641 (7)0.0462 (5)0.0116 (6)0.0317 (4)0.0062 (5)
O10.0504 (17)0.0543 (19)0.0481 (18)0.0154 (16)0.0296 (14)0.0074 (15)
O20.0569 (18)0.072 (3)0.0509 (18)0.0215 (19)0.0349 (16)0.0194 (17)
O30.0518 (17)0.053 (2)0.058 (2)0.0071 (17)0.0268 (15)0.0135 (17)
O40.0453 (15)0.051 (2)0.0562 (18)0.0121 (16)0.0265 (14)−0.0026 (15)
O50.0488 (16)0.0386 (16)0.0605 (18)0.0045 (17)0.0214 (14)0.0071 (17)
O60.0395 (16)0.075 (3)0.059 (2)0.0106 (18)0.0262 (14)0.0093 (19)
N10.0357 (15)0.0351 (17)0.0474 (18)0.0017 (17)0.0183 (13)−0.0015 (17)
N20.0367 (16)0.0413 (19)0.0407 (18)0.0012 (16)0.0221 (14)−0.0009 (15)
N30.0418 (18)0.044 (2)0.0441 (19)0.0080 (17)0.0230 (16)−0.0009 (16)
C10.0354 (19)0.0340 (19)0.0375 (19)−0.0036 (17)0.0196 (16)−0.0050 (16)
C20.0375 (17)0.042 (2)0.0383 (19)−0.0025 (19)0.0218 (15)−0.0042 (18)
C30.040 (2)0.040 (2)0.039 (2)0.0023 (19)0.0194 (16)0.0000 (18)
C40.0366 (19)0.033 (2)0.043 (2)0.0024 (18)0.0178 (16)−0.0027 (17)
C50.0365 (19)0.042 (2)0.043 (2)0.0039 (18)0.0229 (17)−0.0003 (18)
C60.0378 (19)0.043 (2)0.0368 (18)−0.0002 (19)0.0206 (16)−0.0005 (18)
C70.0346 (18)0.039 (2)0.041 (2)0.0002 (18)0.0197 (16)−0.0029 (17)
C80.0389 (19)0.050 (2)0.042 (2)0.001 (2)0.0235 (18)−0.0018 (19)
C90.045 (2)0.051 (3)0.039 (2)0.000 (2)0.0238 (18)0.0054 (18)
C100.041 (2)0.042 (2)0.037 (2)−0.0007 (19)0.0179 (16)0.0021 (18)
C110.0347 (18)0.036 (2)0.0365 (18)−0.0015 (17)0.0181 (15)−0.0025 (16)
C120.036 (2)0.037 (2)0.043 (2)0.0049 (17)0.0197 (17)−0.0022 (17)
C130.0387 (18)0.046 (2)0.044 (2)0.002 (2)0.0254 (16)−0.004 (2)
C140.045 (2)0.053 (3)0.041 (2)0.003 (2)0.0243 (17)0.002 (2)
C150.041 (2)0.047 (2)0.042 (2)0.009 (2)0.0223 (17)0.007 (2)
C160.0344 (17)0.036 (2)0.0374 (19)0.0017 (17)0.0187 (15)0.0009 (16)
Cl1—C21.729 (4)C5—C61.386 (6)
O1—C71.288 (5)C5—H50.9500
O1—H11.02 (8)C6—H60.9500
O2—C71.209 (5)C8—C91.402 (7)
O3—N11.228 (5)C8—H80.9500
O4—N11.218 (4)C9—C101.365 (5)
O5—N31.228 (5)C9—H90.9500
O6—N31.220 (4)C10—C111.425 (5)
N1—C41.474 (5)C10—H100.9500
N2—C81.320 (5)C11—C161.415 (6)
N2—C161.370 (4)C11—C121.425 (5)
N3—C121.474 (5)C12—C131.359 (6)
C1—C21.390 (6)C13—C141.406 (6)
C1—C61.405 (5)C13—H130.9500
C1—C71.514 (6)C14—C151.369 (5)
C2—C31.403 (6)C14—H140.9500
C3—C41.380 (5)C15—C161.413 (5)
C3—H30.9500C15—H150.9500
C4—C51.372 (6)
C7—O1—H1109 (4)O1—C7—C1115.9 (4)
O4—N1—O3123.9 (4)N2—C8—C9122.0 (4)
O4—N1—C4117.9 (4)N2—C8—H8119.0
O3—N1—C4118.2 (3)C9—C8—H8119.0
C8—N2—C16119.5 (4)C10—C9—C8120.6 (4)
O6—N3—O5124.0 (4)C10—C9—H9119.7
O6—N3—C12117.1 (4)C8—C9—H9119.7
O5—N3—C12118.9 (3)C9—C10—C11118.6 (4)
C2—C1—C6118.2 (4)C9—C10—H10120.7
C2—C1—C7126.9 (3)C11—C10—H10120.7
C6—C1—C7114.8 (3)C16—C11—C12115.6 (3)
C1—C2—C3120.7 (3)C16—C11—C10117.8 (3)
C1—C2—Cl1124.3 (3)C12—C11—C10126.5 (4)
C3—C2—Cl1115.0 (3)C13—C12—C11123.1 (4)
C4—C3—C2118.4 (4)C13—C12—N3116.4 (3)
C4—C3—H3120.8C11—C12—N3120.5 (4)
C2—C3—H3120.8C12—C13—C14119.7 (3)
C5—C4—C3122.9 (4)C12—C13—H13120.1
C5—C4—N1118.9 (3)C14—C13—H13120.1
C3—C4—N1118.2 (4)C15—C14—C13120.2 (4)
C4—C5—C6117.9 (3)C15—C14—H14119.9
C4—C5—H5121.0C13—C14—H14119.9
C6—C5—H5121.0C14—C15—C16120.0 (4)
C5—C6—C1121.8 (4)C14—C15—H15120.0
C5—C6—H6119.1C16—C15—H15120.0
C1—C6—H6119.1N2—C16—C15117.2 (4)
O2—C7—O1124.2 (4)N2—C16—C11121.5 (4)
O2—C7—C1119.9 (4)C15—C16—C11121.3 (3)
C6—C1—C2—C3−0.4 (6)C8—C9—C10—C111.8 (7)
C7—C1—C2—C3−179.9 (4)C9—C10—C11—C16−0.4 (6)
C6—C1—C2—Cl1−178.5 (3)C9—C10—C11—C12−177.1 (4)
C7—C1—C2—Cl12.1 (6)C16—C11—C12—C132.9 (6)
C1—C2—C3—C40.5 (6)C10—C11—C12—C13179.7 (4)
Cl1—C2—C3—C4178.7 (3)C16—C11—C12—N3−176.6 (4)
C2—C3—C4—C5−1.0 (7)C10—C11—C12—N30.2 (6)
C2—C3—C4—N1−179.4 (4)O6—N3—C12—C13−34.6 (6)
O4—N1—C4—C53.3 (6)O5—N3—C12—C13144.6 (4)
O3—N1—C4—C5−176.7 (4)O6—N3—C12—C11144.9 (4)
O4—N1—C4—C3−178.1 (4)O5—N3—C12—C11−35.9 (6)
O3—N1—C4—C31.8 (6)C11—C12—C13—C14−1.7 (7)
C3—C4—C5—C61.3 (7)N3—C12—C13—C14177.8 (4)
N1—C4—C5—C6179.7 (4)C12—C13—C14—C150.0 (7)
C4—C5—C6—C1−1.2 (6)C13—C14—C15—C160.2 (7)
C2—C1—C6—C50.8 (6)C8—N2—C16—C15179.2 (4)
C7—C1—C6—C5−179.7 (4)C8—N2—C16—C110.2 (6)
C2—C1—C7—O2−176.0 (4)C14—C15—C16—N2−177.9 (4)
C6—C1—C7—O24.5 (6)C14—C15—C16—C111.1 (7)
C2—C1—C7—O14.2 (6)C12—C11—C16—N2176.4 (4)
C6—C1—C7—O1−175.3 (4)C10—C11—C16—N2−0.7 (6)
C16—N2—C8—C91.3 (7)C12—C11—C16—C15−2.6 (6)
N2—C8—C9—C10−2.4 (7)C10—C11—C16—C15−179.6 (4)
D—H···AD—HH···AD···AD—H···A
O1—H1···N21.02 (8)1.58 (7)2.585 (5)168 (7)
C8—H8···O2i0.952.593.174 (6)120
C9—H9···O2i0.952.563.152 (6)120
C13—H13···O4ii0.952.523.289 (6)138
N3—O5···Cg3iii1.23 (1)3.06 (1)3.724 (4)113 (1)
N3—O5···Cg4iii1.23 (1)3.25 (1)4.118 (4)128 (1)
C7H4ClNO4·C9H6N2O2Z = 2
Mr = 375.72F(000) = 384.00
Triclinic, P1Dx = 1.596 Mg m3
a = 7.6682 (6) ÅMo Kα radiation, λ = 0.71075 Å
b = 8.6515 (8) ÅCell parameters from 7062 reflections
c = 12.8609 (10) Åθ = 3.1–30.1°
α = 79.170 (3)°µ = 0.29 mm1
β = 78.968 (2)°T = 190 K
γ = 70.394 (3)°Block, colorless
V = 781.80 (11) Å30.26 × 0.20 × 0.18 mm
Rigaku R-AXIS RAPID diffractometer3075 reflections with I > 2σ(I)
Detector resolution: 10.000 pixels mm-1Rint = 0.055
ω scansθmax = 30.0°, θmin = 3.1°
Absorption correction: numerical (NUMABS; Higashi, 1999)h = −10→10
Tmin = 0.933, Tmax = 0.950k = −12→12
9772 measured reflectionsl = −18→16
4502 independent reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.052Hydrogen site location: mixed
wR(F2) = 0.148H atoms treated by a mixture of independent and constrained refinement
S = 1.09w = 1/[σ2(Fo2) + (0.077P)2] where P = (Fo2 + 2Fc2)/3
4502 reflections(Δ/σ)max < 0.001
239 parametersΔρmax = 0.42 e Å3
0 restraintsΔρmin = −0.39 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Reflections were merged by SHELXL according to the crystal class for the calculation of statistics and refinement. _reflns_Friedel_fraction is defined as the number of unique Friedel pairs measured divided by the number that would be possible theoretically, ignoring centric projections and systematic absences.
xyzUiso*/Ueq
Cl10.14420 (7)0.28783 (7)−0.10243 (4)0.05199 (18)
O10.27021 (17)0.49296 (15)0.23397 (9)0.0398 (3)
O20.49601 (18)0.27221 (17)0.29240 (9)0.0464 (3)
O30.7904 (2)0.35306 (18)0.13902 (11)0.0517 (4)
O40.91612 (19)0.09724 (19)0.11445 (12)0.0560 (4)
O5−0.2211 (2)0.9235 (2)0.73000 (11)0.0588 (4)
O6−0.3859 (2)1.13276 (19)0.63614 (12)0.0585 (4)
N10.78959 (19)0.22747 (19)0.10917 (11)0.0375 (3)
N20.18718 (18)0.57290 (17)0.42980 (10)0.0304 (3)
N3−0.2703 (2)0.99626 (19)0.64474 (12)0.0363 (3)
C10.4473 (2)0.31055 (18)0.11065 (11)0.0280 (3)
C20.6260 (2)0.2358 (2)0.06195 (12)0.0311 (3)
C30.6607 (3)0.1738 (2)−0.03429 (13)0.0394 (4)
H30.7850390.121041−0.0646310.047*
C40.5112 (3)0.1900 (2)−0.08550 (13)0.0405 (4)
H40.5312670.149424−0.1519120.049*
C50.3327 (2)0.2660 (2)−0.03861 (12)0.0347 (4)
C60.2973 (2)0.3264 (2)0.05903 (12)0.0322 (3)
H60.1726920.3775590.0898010.039*
C70.4089 (2)0.3576 (2)0.22188 (12)0.0289 (3)
C80.2766 (2)0.4942 (2)0.51114 (13)0.0338 (4)
H80.3798510.3973420.5011630.041*
C90.2254 (2)0.5479 (2)0.61268 (13)0.0360 (4)
H90.2954940.4889360.6691320.043*
C100.0752 (2)0.6842 (2)0.62990 (12)0.0329 (4)
H100.0396590.7201380.6984590.039*
C11−0.0277 (2)0.77237 (19)0.54485 (11)0.0262 (3)
C12−0.1866 (2)0.9174 (2)0.54633 (12)0.0287 (3)
C13−0.2716 (2)0.9935 (2)0.45823 (13)0.0335 (3)
H13−0.3769551.0901400.4629330.040*
C14−0.2037 (2)0.9294 (2)0.36000 (13)0.0364 (4)
H14−0.2642130.9819480.2989180.044*
C15−0.0520 (2)0.7928 (2)0.35311 (12)0.0335 (4)
H15−0.0052890.7510290.2866010.040*
C160.0378 (2)0.71153 (19)0.44377 (11)0.0269 (3)
H10.249 (4)0.510 (4)0.310 (3)0.097 (9)*
U11U22U33U12U13U23
Cl10.0591 (3)0.0735 (4)0.0357 (3)−0.0300 (3)−0.0154 (2)−0.0106 (2)
O10.0383 (7)0.0413 (7)0.0295 (6)0.0079 (5)−0.0075 (5)−0.0150 (5)
O20.0500 (8)0.0468 (8)0.0289 (6)0.0086 (6)−0.0146 (5)−0.0075 (5)
O30.0544 (8)0.0521 (9)0.0544 (8)−0.0177 (7)−0.0210 (7)−0.0056 (7)
O40.0337 (7)0.0574 (10)0.0559 (8)0.0116 (6)−0.0050 (6)−0.0061 (7)
O50.0689 (10)0.0644 (10)0.0325 (7)−0.0043 (8)0.0003 (7)−0.0192 (7)
O60.0579 (9)0.0479 (9)0.0567 (9)0.0053 (7)−0.0009 (7)−0.0234 (7)
N10.0296 (7)0.0450 (9)0.0289 (7)−0.0034 (6)−0.0018 (5)−0.0007 (6)
N20.0294 (6)0.0313 (7)0.0293 (6)−0.0064 (5)−0.0030 (5)−0.0079 (5)
N30.0347 (8)0.0400 (8)0.0355 (7)−0.0129 (6)0.0037 (6)−0.0147 (6)
C10.0310 (8)0.0252 (7)0.0227 (7)−0.0023 (6)−0.0029 (6)−0.0038 (6)
C20.0302 (8)0.0287 (8)0.0288 (7)−0.0030 (6)−0.0037 (6)−0.0022 (6)
C30.0409 (9)0.0378 (9)0.0310 (8)−0.0029 (7)0.0048 (7)−0.0111 (7)
C40.0538 (11)0.0396 (10)0.0275 (8)−0.0120 (8)−0.0001 (7)−0.0130 (7)
C50.0455 (10)0.0364 (9)0.0252 (7)−0.0145 (7)−0.0090 (7)−0.0040 (7)
C60.0324 (8)0.0343 (8)0.0262 (7)−0.0045 (7)−0.0042 (6)−0.0057 (6)
C70.0285 (7)0.0313 (8)0.0244 (7)−0.0035 (6)−0.0052 (6)−0.0067 (6)
C80.0298 (8)0.0339 (9)0.0371 (8)−0.0069 (7)−0.0079 (6)−0.0054 (7)
C90.0365 (9)0.0405 (9)0.0321 (8)−0.0107 (7)−0.0129 (7)−0.0016 (7)
C100.0356 (8)0.0410 (9)0.0251 (7)−0.0134 (7)−0.0057 (6)−0.0078 (7)
C110.0276 (7)0.0294 (8)0.0242 (7)−0.0121 (6)−0.0023 (5)−0.0051 (6)
C120.0279 (7)0.0305 (8)0.0283 (7)−0.0109 (6)0.0021 (6)−0.0080 (6)
C130.0286 (8)0.0301 (8)0.0387 (9)−0.0072 (6)−0.0023 (6)−0.0033 (7)
C140.0355 (9)0.0393 (9)0.0305 (8)−0.0070 (7)−0.0089 (7)0.0007 (7)
C150.0368 (9)0.0382 (9)0.0237 (7)−0.0081 (7)−0.0054 (6)−0.0052 (6)
C160.0268 (7)0.0298 (8)0.0245 (7)−0.0093 (6)−0.0027 (6)−0.0045 (6)
Cl1—C51.7351 (17)C4—H40.9500
O1—C71.3022 (18)C5—C61.395 (2)
O1—H11.00 (3)C6—H60.9500
O2—C71.2098 (19)C8—C91.409 (2)
O3—N11.2207 (19)C8—H80.9500
O4—N11.2158 (19)C9—C101.362 (2)
O5—N31.217 (2)C9—H90.9500
O6—N31.216 (2)C10—C111.419 (2)
N1—C21.470 (2)C10—H100.9500
N2—C81.312 (2)C11—C121.426 (2)
N2—C161.365 (2)C11—C161.431 (2)
N3—C121.4829 (19)C12—C131.362 (2)
C1—C21.385 (2)C13—C141.411 (2)
C1—C61.391 (2)C13—H130.9500
C1—C71.5085 (19)C14—C151.355 (2)
C2—C31.385 (2)C14—H140.9500
C3—C41.384 (3)C15—C161.415 (2)
C3—H30.9500C15—H150.9500
C4—C51.378 (2)
C7—O1—H1107.9 (18)O1—C7—C1113.35 (13)
O4—N1—O3124.32 (16)N2—C8—C9122.56 (15)
O4—N1—C2118.09 (15)N2—C8—H8118.7
O3—N1—C2117.58 (14)C9—C8—H8118.7
C8—N2—C16119.04 (13)C10—C9—C8119.96 (15)
O6—N3—O5122.72 (14)C10—C9—H9120.0
O6—N3—C12117.87 (15)C8—C9—H9120.0
O5—N3—C12119.41 (15)C9—C10—C11119.64 (14)
C2—C1—C6118.14 (13)C9—C10—H10120.2
C2—C1—C7122.53 (13)C11—C10—H10120.2
C6—C1—C7118.97 (13)C10—C11—C12128.17 (13)
C1—C2—C3122.79 (15)C10—C11—C16116.46 (14)
C1—C2—N1120.19 (13)C12—C11—C16115.35 (14)
C3—C2—N1116.94 (14)C13—C12—C11122.78 (13)
C4—C3—C2118.91 (16)C13—C12—N3115.36 (14)
C4—C3—H3120.5C11—C12—N3121.86 (14)
C2—C3—H3120.5C12—C13—C14120.30 (15)
C5—C4—C3118.91 (14)C12—C13—H13119.9
C5—C4—H4120.5C14—C13—H13119.9
C3—C4—H4120.5C15—C14—C13119.77 (15)
C4—C5—C6122.30 (15)C15—C14—H14120.1
C4—C5—Cl1119.31 (12)C13—C14—H14120.1
C6—C5—Cl1118.40 (13)C14—C15—C16120.81 (14)
C1—C6—C5118.93 (15)C14—C15—H15119.6
C1—C6—H6120.5C16—C15—H15119.6
C5—C6—H6120.5N2—C16—C15116.71 (13)
O2—C7—O1124.62 (13)N2—C16—C11122.30 (14)
O2—C7—C1121.98 (14)C15—C16—C11120.99 (14)
C6—C1—C2—C3−1.3 (3)C8—C9—C10—C11−0.6 (2)
C7—C1—C2—C3171.77 (16)C9—C10—C11—C12−179.44 (15)
C6—C1—C2—N1175.37 (14)C9—C10—C11—C16−1.2 (2)
C7—C1—C2—N1−11.5 (2)C10—C11—C12—C13178.45 (16)
O4—N1—C2—C1135.40 (16)C16—C11—C12—C130.2 (2)
O3—N1—C2—C1−45.7 (2)C10—C11—C12—N3−1.3 (2)
O4—N1—C2—C3−47.7 (2)C16—C11—C12—N3−179.55 (13)
O3—N1—C2—C3131.17 (17)O6—N3—C12—C13−11.0 (2)
C1—C2—C3—C41.4 (3)O5—N3—C12—C13169.25 (16)
N1—C2—C3—C4−175.35 (16)O6—N3—C12—C11168.68 (15)
C2—C3—C4—C5−0.6 (3)O5—N3—C12—C11−11.0 (2)
C3—C4—C5—C6−0.3 (3)C11—C12—C13—C140.2 (2)
C3—C4—C5—Cl1179.69 (14)N3—C12—C13—C14179.91 (14)
C2—C1—C6—C50.4 (2)C12—C13—C14—C15−0.8 (3)
C7—C1—C6—C5−172.98 (15)C13—C14—C15—C161.1 (3)
C4—C5—C6—C10.4 (3)C8—N2—C16—C15179.18 (15)
Cl1—C5—C6—C1−179.59 (12)C8—N2—C16—C11−1.4 (2)
C2—C1—C7—O2−37.4 (2)C14—C15—C16—N2178.69 (15)
C6—C1—C7—O2135.67 (18)C14—C15—C16—C11−0.7 (2)
C2—C1—C7—O1145.23 (15)C10—C11—C16—N22.2 (2)
C6—C1—C7—O1−41.7 (2)C12—C11—C16—N2−179.29 (13)
C16—N2—C8—C9−0.5 (2)C10—C11—C16—C15−178.39 (14)
N2—C8—C9—C101.5 (3)C12—C11—C16—C150.1 (2)
D—H···AD—HH···AD···AD—H···A
O1—H1···N20.99 (4)1.66 (4)2.6405 (17)169 (3)
C3—H3···O4i0.952.493.408 (3)162
C10—H10···O3ii0.952.543.254 (2)132
C13—H13···O2iii0.952.593.190 (2)121
C14—H14···O2iii0.952.563.173 (2)122
  10 in total

1.  Novel tools for visualizing and exploring intermolecular interactions in molecular crystals.

Authors:  Joshua J McKinnon; Mark A Spackman; Anthony S Mitchell
Journal:  Acta Crystallogr B       Date:  2004-11-11

2.  Towards quantitative analysis of intermolecular interactions with Hirshfeld surfaces.

Authors:  Joshua J McKinnon; Dylan Jayatilaka; Mark A Spackman
Journal:  Chem Commun (Camb)       Date:  2007-10-07       Impact factor: 6.222

3.  PLATON SQUEEZE: a tool for the calculation of the disordered solvent contribution to the calculated structure factors.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr C Struct Chem       Date:  2015-01-01       Impact factor: 1.172

4.  Hydrogen-bonded structures of the isomeric compounds of phthalazine with 3-chloro-2-nitrobenzoic acid, 4-chloro-2-nitrobenzoic acid and 4-chloro-3-nitrobenzoic acid.

Authors:  Kazuma Gotoh; Hiroyuki Ishida
Journal:  Acta Crystallogr C       Date:  2011-10-31       Impact factor: 1.172

5.  Hydrogen-bonded structures of the isomeric compounds of quinoline with 2-chloro-5-nitrobenzoic acid, 3-chloro-2-nitrobenzoic acid, 4-chloro-2-nitrobenzoic acid and 5-chloro-2-nitrobenzoic acid.

Authors:  Kazuma Gotoh; Hiroyuki Ishida
Journal:  Acta Crystallogr C       Date:  2009-09-30       Impact factor: 1.172

6.  2-Chloro-4-nitro-benzoic acid-quinoline (1/1).

Authors:  Kazuma Gotoh; Hiroyuki Ishida
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-10-08

7.  SHELXT - integrated space-group and crystal-structure determination.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A Found Adv       Date:  2015-01-01       Impact factor: 2.290

8.  Crystal structure refinement with SHELXL.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr C Struct Chem       Date:  2015-01-01       Impact factor: 1.172

9.  Use of intensity quotients and differences in absolute structure refinement.

Authors:  Simon Parsons; Howard D Flack; Trixie Wagner
Journal:  Acta Crystallogr B Struct Sci Cryst Eng Mater       Date:  2013-05-17

10.  The Cambridge Structural Database.

Authors:  Colin R Groom; Ian J Bruno; Matthew P Lightfoot; Suzanna C Ward
Journal:  Acta Crystallogr B Struct Sci Cryst Eng Mater       Date:  2016-04-01
  10 in total

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