| Literature DB >> 31709076 |
Fatma Garci1, Hela Ferjani2, Hammouda Chebbi1, Mariem Ben Jomaa1, Mohamed Faouzi Zid1.
Abstract
The title mol-ecular salt, (C7H11N2)2[Hg2Cl6], crystallizes with two 4-(di-methyl-amino)-pyridinium cations (A and B) and two half hexa-chlorido-dimercurate(II) anions in the asymmetric unit. The organic cations exhibit essentially the same features with an almost planar pyridyl ring (r.m.s. deviations of 0.0028 and 0.0109 Å), which forms an inclined dihedral angle with the dimethyamino group [3.06 (1) and 1.61 (1)°, respectively]. The di-methyl-amino groups in the two cations are planar, and the C-N bond lengths are shorter than that in 4-(di-methyl-amino)-pyridine. In the crystal, mixed cation-anion layers lying parallel to the (010) plane are formed through N-H⋯Cl hydrogen bonds and adjacent layers are linked by C-H⋯Cl hydrogen bonds, forming a three-dimensional network. The analyses of the calculated Hirshfeld surfaces confirm the relevance of the above inter-molecular inter-actions, but also serve to further differentiate the weaker inter-molecular inter-actions formed by the organic cations and inorganic anions, such as π-π and Cl⋯Cl inter-actions. The powder XRD data confirms the phase purity of the crystalline sample. Furthermore, the vibrational absorption bands were identified by IR spectroscopy and the optical properties were studied by using optical UV-visible absorption spectroscopy. © Garci et al. 2019.Entities:
Keywords: 4-dimethylaminopyridium; Hirshfeld surface; chloromercurate(II) salt; crystal structure; fingerprint plots; hybrid compound
Year: 2019 PMID: 31709076 PMCID: PMC6829733 DOI: 10.1107/S2056989019013124
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
Figure 1The molecular structure of (I). Atomic displacement parameters for the non-H atoms are drawn at the 50% probability level. Unlabelled atoms are related to labelled ones by the symmetry operation −x + 1, −y, −z + 2.
Figure 2Experimental and simulated powder XRD patterns of (I).
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N1 | 0.86 | 2.54 | 3.239 (8) | 140 |
| N1 | 0.86 | 2.46 | 3.195 (10) | 145 |
| C2 | 0.93 | 2.82 | 3.634 (11) | 147 |
| C3 | 0.93 | 2.75 | 3.485 (11) | 136 |
Symmetry code: (i) .
Figure 3Structure of (I) viewed along the a axis showing the succession of mixed layers parallel to the (010) plane. The orange dotted lines indicate hydrogen bonds.
Figure 4A view of the supramolecular mixed layer in the ac plane of (I), showing the alternating organic and inorganic columns parallel to the [100] direction. The orange dotted lines indicate N—H⋯Cl hydrogen bonds.
Figure 5π–π stacking interactions between the nearest aromatic organic cation neighbors into two types of organic columns (A or B).
Figure 6Cl⋯Cl and Hg⋯Cl interactions between hexachloridodimercurate(II) anions dispersed parallel to the a axis in the inorganic column.
Figure 7Infrared spectrum of (I).
Figure 8UV–vis spectrum of (I). The inset shows the experimental energy band gap obtained from the absorption edge wavelength.
Figure 9HOMO–LUMO molecular orbitals showing the ground to excited state electronic transitions for (I).
Figure 10View of the Hirshfeld surfaces for (I) mapped over (a) d norm and (b) shape-index, displaying the intermolecular interactions.
Figure 11Full two-dimensional fingerprint plots for (I), showing (a) all interactions, and delineated into (b) H⋯Cl/Cl⋯H, (c) H⋯H, (d) Hg⋯Cl/Cl⋯Hg, (e) C⋯C and (f) Cl⋯Cl interactions. The d i and d e values are the closest internal and external distances (in Å) from a given point on the Hirshfeld surface.
Figure 12Relative contribution (%) of various intermolecular interactions to the Hirshfeld surface area.
Experimental details
| Crystal data | |
| Chemical formula | (C7H11N2)2[Hg2Cl6] |
|
| 860.23 |
| Crystal system, space group | Triclinic, |
| Temperature (K) | 293 |
|
| 7.6558 (3), 11.8961 (5), 13.5853 (4) |
| α, β, γ (°) | 82.950 (3), 76.072 (3), 76.339 (4) |
|
| 1164.07 (8) |
|
| 2 |
| Radiation type | Mo |
| μ (mm−1) | 13.87 |
| Crystal size (mm) | 0.72 × 0.24 × 0.18 |
| Data collection | |
| Diffractometer | Enraf–Nonius CAD-4 |
| Absorption correction | ψ scan (North |
|
| 0.53, 0.99 |
| No. of measured, independent and observed [ | 7139, 5875, 3913 |
|
| 0.040 |
| (sin θ/λ)max (Å−1) | 0.671 |
| Refinement | |
|
| 0.055, 0.153, 1.03 |
| No. of reflections | 5875 |
| No. of parameters | 236 |
| H-atom treatment | H-atom parameters constrained |
| Δρmax, Δρmin (e Å−3) | 3.41, −3.00 |
Computer programs: CAD-4 EXPRESS (Duisenberg, 1992 ▸; Macíček & Yordanov, 1992 ▸), XCAD4 (Harms & Wocadlo, 1995 ▸), SHELXT2018 (Sheldrick, 2015a ▸), SHELXL2018 (Sheldrick, 2015b ▸), DIAMOND (Brandenburg, 2006 ▸), Mercury (Macrae et al., 2006 ▸), WinGX (Farrugia, 2012 ▸) and publCIF (Westrip, 2010 ▸).
| (C7H11N2)2[Hg2Cl6] | |
| Triclinic, | |
| Mo | |
| Cell parameters from 25 reflections | |
| θ = 10–15° | |
| α = 82.950 (3)° | µ = 13.87 mm−1 |
| β = 76.072 (3)° | |
| γ = 76.339 (4)° | Parallelepiped, colorless |
| 0.72 × 0.24 × 0.18 mm |
| Enraf–Nonius CAD-4 diffractometer | 3913 reflections with |
| Radiation source: fine-focus sealed tube | |
| Graphite monochromator | θmax = 28.5°, θmin = 2.3° |
| ω/2θ scans | |
| Absorption correction: ψ scan (North | |
| 7139 measured reflections | 2 standard reflections every 120 reflections |
| 5875 independent reflections | intensity decay: 1% |
| Refinement on | Hydrogen site location: inferred from neighbouring sites |
| Least-squares matrix: full | H-atom parameters constrained |
| (Δ/σ)max = 0.001 | |
| Δρmax = 3.41 e Å−3 | |
| 5875 reflections | Δρmin = −3.00 e Å−3 |
| 236 parameters | Extinction correction: SHELXL2018 (Sheldrick, 2015b), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| 0 restraints | Extinction coefficient: 0.0058 (5) |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Hg1 | 0.73846 (6) | 0.52983 (3) | 0.96401 (3) | 0.04867 (15) | |
| Hg2 | 0.70787 (6) | 0.02376 (3) | 0.53548 (3) | 0.05017 (16) | |
| Cl3 | 0.7012 (4) | 0.6752 (2) | 0.82926 (18) | 0.0507 (6) | |
| Cl5 | 0.5562 (4) | 0.1596 (2) | 0.66140 (18) | 0.0518 (6) | |
| Cl2 | 0.4827 (3) | 0.5982 (2) | 1.11547 (17) | 0.0489 (6) | |
| Cl6 | 0.5814 (4) | 0.1067 (2) | 0.37887 (17) | 0.0487 (5) | |
| Cl1 | 0.9450 (4) | 0.3586 (2) | 1.0069 (2) | 0.0507 (6) | |
| Cl4 | 0.9497 (4) | −0.1420 (2) | 0.5038 (2) | 0.0544 (6) | |
| N1B | 0.3722 (13) | 0.0129 (9) | 0.8551 (6) | 0.055 (2) | |
| H1B | 0.423341 | 0.022921 | 0.791911 | 0.067* | |
| N1A | 0.6907 (12) | 0.5280 (8) | 0.6462 (6) | 0.047 (2) | |
| H1A | 0.665775 | 0.537818 | 0.710142 | 0.056* | |
| N2B | 0.1208 (12) | −0.0324 (7) | 1.1557 (6) | 0.0441 (18) | |
| C1B | 0.2047 (12) | −0.0182 (8) | 1.0590 (6) | 0.0359 (19) | |
| C5B | 0.2580 (14) | 0.0880 (8) | 1.0172 (8) | 0.043 (2) | |
| H5B | 0.237846 | 0.149257 | 1.057848 | 0.051* | |
| N2A | 0.8004 (12) | 0.4827 (8) | 0.3413 (6) | 0.047 (2) | |
| C2A | 0.7198 (13) | 0.4105 (8) | 0.5161 (8) | 0.042 (2) | |
| H2A | 0.712530 | 0.340021 | 0.496158 | 0.050* | |
| C4B | 0.3388 (16) | 0.0977 (10) | 0.9166 (9) | 0.058 (3) | |
| H4B | 0.372259 | 0.167244 | 0.889581 | 0.069* | |
| C1A | 0.7683 (12) | 0.4958 (8) | 0.4424 (6) | 0.0352 (18) | |
| C2B | 0.2482 (14) | −0.1070 (9) | 0.9916 (7) | 0.043 (2) | |
| H2B | 0.223027 | −0.179339 | 1.015900 | 0.052* | |
| C3B | 0.3261 (15) | −0.0884 (10) | 0.8918 (8) | 0.052 (3) | |
| H3B | 0.347796 | −0.147079 | 0.848196 | 0.063* | |
| C5A | 0.7751 (14) | 0.6032 (9) | 0.4768 (8) | 0.047 (2) | |
| H5A | 0.805230 | 0.663582 | 0.430389 | 0.056* | |
| C4A | 0.7372 (15) | 0.6156 (9) | 0.5779 (8) | 0.050 (2) | |
| H4A | 0.742924 | 0.684838 | 0.600944 | 0.061* | |
| C3A | 0.6831 (14) | 0.4271 (9) | 0.6157 (7) | 0.045 (2) | |
| H3A | 0.652280 | 0.368100 | 0.663649 | 0.054* | |
| C7B | 0.0765 (17) | 0.0644 (11) | 1.2239 (8) | 0.061 (3) | |
| H7Q | 0.016344 | 0.039805 | 1.290807 | 0.091* | |
| H7P | 0.188302 | 0.085789 | 1.227041 | 0.091* | |
| H7D | −0.003486 | 0.129990 | 1.197662 | 0.091* | |
| C6B | 0.0727 (16) | −0.1412 (10) | 1.1987 (8) | 0.058 (3) | |
| H6Q | 0.013266 | −0.134628 | 1.269144 | 0.087* | |
| H6D | −0.009493 | −0.159869 | 1.162861 | 0.087* | |
| H6P | 0.182338 | −0.201411 | 1.192574 | 0.087* | |
| C7A | 0.8505 (17) | 0.5720 (11) | 0.2661 (8) | 0.063 (3) | |
| H7I | 0.867226 | 0.546304 | 0.199482 | 0.094* | |
| H7J | 0.754609 | 0.640812 | 0.274933 | 0.094* | |
| H7K | 0.963334 | 0.588643 | 0.273377 | 0.094* | |
| C6A | 0.8007 (17) | 0.3711 (11) | 0.3057 (8) | 0.065 (3) | |
| H6K | 0.825473 | 0.376560 | 0.232724 | 0.097* | |
| H6I | 0.894286 | 0.311834 | 0.328549 | 0.097* | |
| H6J | 0.682564 | 0.351849 | 0.332384 | 0.097* |
| Hg1 | 0.0531 (3) | 0.0467 (2) | 0.0452 (2) | −0.00220 (18) | −0.01806 (17) | −0.00119 (16) |
| Hg2 | 0.0507 (3) | 0.0470 (3) | 0.0479 (2) | −0.00196 (18) | −0.00822 (17) | −0.00665 (17) |
| Cl3 | 0.0702 (17) | 0.0420 (12) | 0.0451 (12) | −0.0111 (11) | −0.0240 (11) | −0.0015 (10) |
| Cl5 | 0.0602 (15) | 0.0440 (13) | 0.0483 (12) | −0.0159 (11) | 0.0017 (11) | −0.0101 (10) |
| Cl2 | 0.0486 (13) | 0.0604 (15) | 0.0393 (11) | −0.0136 (11) | −0.0069 (10) | −0.0111 (10) |
| Cl6 | 0.0551 (14) | 0.0543 (14) | 0.0414 (11) | −0.0190 (11) | −0.0166 (10) | 0.0044 (10) |
| Cl1 | 0.0547 (14) | 0.0363 (11) | 0.0709 (16) | −0.0105 (10) | −0.0348 (12) | 0.0018 (11) |
| Cl4 | 0.0431 (13) | 0.0373 (12) | 0.0800 (18) | −0.0075 (10) | −0.0079 (12) | −0.0065 (11) |
| N1B | 0.052 (5) | 0.072 (7) | 0.038 (4) | −0.005 (5) | −0.012 (4) | −0.002 (4) |
| N1A | 0.057 (5) | 0.053 (5) | 0.034 (4) | −0.016 (4) | −0.011 (4) | −0.006 (4) |
| N2B | 0.049 (5) | 0.048 (5) | 0.035 (4) | −0.012 (4) | −0.009 (3) | −0.004 (3) |
| C1B | 0.030 (4) | 0.043 (5) | 0.035 (4) | 0.002 (3) | −0.018 (3) | −0.002 (4) |
| C5B | 0.049 (5) | 0.028 (4) | 0.050 (5) | −0.001 (4) | −0.018 (4) | 0.000 (4) |
| N2A | 0.041 (4) | 0.067 (6) | 0.033 (4) | −0.011 (4) | −0.007 (3) | −0.005 (4) |
| C2A | 0.040 (5) | 0.035 (5) | 0.053 (5) | −0.006 (4) | −0.015 (4) | −0.007 (4) |
| C4B | 0.050 (6) | 0.047 (6) | 0.072 (7) | −0.005 (5) | −0.021 (5) | 0.017 (5) |
| C1A | 0.031 (4) | 0.042 (5) | 0.034 (4) | −0.007 (4) | −0.013 (3) | 0.001 (4) |
| C2B | 0.046 (5) | 0.044 (5) | 0.043 (5) | −0.006 (4) | −0.019 (4) | −0.004 (4) |
| C3B | 0.052 (6) | 0.061 (7) | 0.046 (5) | 0.004 (5) | −0.019 (5) | −0.026 (5) |
| C5A | 0.049 (6) | 0.043 (5) | 0.051 (6) | −0.013 (4) | −0.018 (5) | 0.003 (4) |
| C4A | 0.053 (6) | 0.038 (5) | 0.061 (6) | −0.004 (4) | −0.013 (5) | −0.014 (5) |
| C3A | 0.046 (5) | 0.048 (6) | 0.041 (5) | −0.013 (4) | −0.008 (4) | 0.004 (4) |
| C7B | 0.061 (7) | 0.080 (8) | 0.042 (5) | −0.014 (6) | −0.008 (5) | −0.019 (5) |
| C6B | 0.064 (7) | 0.063 (7) | 0.051 (6) | −0.019 (6) | −0.019 (5) | 0.005 (5) |
| C7A | 0.066 (7) | 0.074 (8) | 0.041 (5) | −0.013 (6) | −0.006 (5) | 0.013 (5) |
| C6A | 0.068 (8) | 0.081 (9) | 0.048 (6) | −0.014 (7) | −0.011 (5) | −0.020 (6) |
| Hg1—Cl1 | 2.371 (2) | C2A—C3A | 1.344 (14) |
| Hg1—Cl3 | 2.380 (2) | C2A—C1A | 1.386 (13) |
| Hg1—Cl2 | 2.539 (2) | C2A—H2A | 0.9300 |
| Hg1—Cl2i | 2.975 (2) | C4B—H4B | 0.9300 |
| Hg2—Cl4 | 2.367 (3) | C1A—C5A | 1.429 (13) |
| Hg2—Cl5 | 2.392 (2) | C2B—C3B | 1.357 (15) |
| Hg2—Cl6 | 2.542 (2) | C2B—H2B | 0.9300 |
| Hg2—Cl6ii | 2.934 (3) | C3B—H3B | 0.9300 |
| N1B—C4B | 1.329 (15) | C5A—C4A | 1.352 (15) |
| N1B—C3B | 1.340 (15) | C5A—H5A | 0.9300 |
| N1B—H1B | 0.8600 | C4A—H4A | 0.9300 |
| N1A—C3A | 1.334 (13) | C3A—H3A | 0.9300 |
| N1A—C4A | 1.362 (14) | C7B—H7Q | 0.9600 |
| N1A—H1A | 0.8600 | C7B—H7P | 0.9600 |
| N2B—C1B | 1.326 (12) | C7B—H7D | 0.9600 |
| N2B—C6B | 1.445 (14) | C6B—H6Q | 0.9600 |
| N2B—C7B | 1.492 (13) | C6B—H6D | 0.9600 |
| C1B—C2B | 1.410 (13) | C6B—H6P | 0.9600 |
| C1B—C5B | 1.429 (14) | C7A—H7I | 0.9600 |
| C5B—C4B | 1.360 (15) | C7A—H7J | 0.9600 |
| C5B—H5B | 0.9300 | C7A—H7K | 0.9600 |
| N2A—C1A | 1.357 (11) | C6A—H6K | 0.9600 |
| N2A—C7A | 1.435 (14) | C6A—H6I | 0.9600 |
| N2A—C6A | 1.468 (15) | C6A—H6J | 0.9600 |
| Cl1—Hg1—Cl3 | 141.44 (10) | C2A—C1A—C5A | 117.1 (8) |
| Cl1—Hg1—Cl2 | 112.01 (9) | C3B—C2B—C1B | 121.0 (10) |
| Cl3—Hg1—Cl2 | 106.16 (9) | C3B—C2B—H2B | 119.5 |
| Cl1—Hg1—Cl2i | 93.63 (8) | C1B—C2B—H2B | 119.5 |
| Cl3—Hg1—Cl2i | 88.63 (8) | N1B—C3B—C2B | 121.1 (9) |
| Cl2—Hg1—Cl2i | 94.45 (7) | N1B—C3B—H3B | 119.4 |
| Cl4—Hg2—Cl5 | 141.70 (10) | C2B—C3B—H3B | 119.4 |
| Cl4—Hg2—Cl6 | 112.72 (10) | C4A—C5A—C1A | 119.1 (10) |
| Cl5—Hg2—Cl6 | 105.06 (9) | C4A—C5A—H5A | 120.5 |
| Cl4—Hg2—Cl6ii | 95.28 (8) | C1A—C5A—H5A | 120.5 |
| Cl5—Hg2—Cl6ii | 87.53 (8) | C5A—C4A—N1A | 120.7 (9) |
| Cl6—Hg2—Cl6ii | 94.73 (7) | C5A—C4A—H4A | 119.6 |
| Hg1—Cl2—Hg1i | 85.55 (7) | N1A—C4A—H4A | 119.6 |
| Hg2—Cl6—Hg2ii | 85.27 (7) | N1A—C3A—C2A | 120.3 (9) |
| C4B—N1B—C3B | 119.8 (9) | N1A—C3A—H3A | 119.9 |
| C4B—N1B—H1B | 120.1 | C2A—C3A—H3A | 119.9 |
| C3B—N1B—H1B | 120.1 | N2B—C7B—H7Q | 109.5 |
| C3A—N1A—C4A | 121.2 (8) | N2B—C7B—H7P | 109.5 |
| C3A—N1A—H1A | 119.4 | H7Q—C7B—H7P | 109.5 |
| C4A—N1A—H1A | 119.4 | N2B—C7B—H7D | 109.5 |
| C1B—N2B—C6B | 121.7 (9) | H7Q—C7B—H7D | 109.5 |
| C1B—N2B—C7B | 120.2 (9) | H7P—C7B—H7D | 109.5 |
| C6B—N2B—C7B | 118.1 (8) | N2B—C6B—H6Q | 109.5 |
| N2B—C1B—C2B | 122.2 (9) | N2B—C6B—H6D | 109.5 |
| N2B—C1B—C5B | 121.8 (9) | H6Q—C6B—H6D | 109.5 |
| C2B—C1B—C5B | 116.1 (9) | N2B—C6B—H6P | 109.5 |
| C4B—C5B—C1B | 118.6 (9) | H6Q—C6B—H6P | 109.5 |
| C4B—C5B—H5B | 120.7 | H6D—C6B—H6P | 109.5 |
| C1B—C5B—H5B | 120.7 | N2A—C7A—H7I | 109.5 |
| C1A—N2A—C7A | 122.1 (9) | N2A—C7A—H7J | 109.5 |
| C1A—N2A—C6A | 120.1 (9) | H7I—C7A—H7J | 109.5 |
| C7A—N2A—C6A | 117.6 (9) | N2A—C7A—H7K | 109.5 |
| C3A—C2A—C1A | 121.6 (9) | H7I—C7A—H7K | 109.5 |
| C3A—C2A—H2A | 119.2 | H7J—C7A—H7K | 109.5 |
| C1A—C2A—H2A | 119.2 | N2A—C6A—H6K | 109.5 |
| N1B—C4B—C5B | 123.3 (11) | N2A—C6A—H6I | 109.5 |
| N1B—C4B—H4B | 118.4 | H6K—C6A—H6I | 109.5 |
| C5B—C4B—H4B | 118.4 | N2A—C6A—H6J | 109.5 |
| N2A—C1A—C2A | 122.8 (9) | H6K—C6A—H6J | 109.5 |
| N2A—C1A—C5A | 120.0 (9) | H6I—C6A—H6J | 109.5 |
| H··· | ||||
| N1 | 0.86 | 2.54 | 3.239 (8) | 140 |
| N1 | 0.86 | 2.46 | 3.195 (10) | 145 |
| C2 | 0.93 | 2.82 | 3.634 (11) | 147 |
| C3 | 0.93 | 2.75 | 3.485 (11) | 136 |