| Literature DB >> 31706280 |
Sang Yeon Cho1, Sungha Kim2, Mi-Ju Son2, Gwanghun Kim3, Parul Singh4, Ha Neul Kim5, Hei-Gwon Choi6, Heon Jong Yoo7,8, Young Bok Ko7,8, Byung Seok Lee9,10, Hyuk Soo Eun11,12.
Abstract
BACKGROUND: Nicotinamide adenine dinucleotide phosphate (NADPH) oxidase-derived reactive oxygen species (ROS) not only can promote cancer progression, but also they have recently emerged as mediators of the mucosal immune system. However, the roles and clinical relevance of the collective or individual NADPH oxidase (NOX) family genes in cervical cancer have not been studied.Entities:
Keywords: Disease-free survival; Dual oxidases; NADPH oxidases; Papillomaviridae; Survival; Uterine cervical neoplasms
Mesh:
Substances:
Year: 2019 PMID: 31706280 PMCID: PMC6842485 DOI: 10.1186/s12885-019-6202-3
Source DB: PubMed Journal: BMC Cancer ISSN: 1471-2407 Impact factor: 4.430
Clinicopathologic information of the cervical cancer patients
| Feature | Total (%) |
|---|---|
| Number | 307 (100) |
| Age | |
| ≤ 50 years | 188 (61.2) |
| > 50 years | 119 (38.8) |
| Histological type | |
| Squamous cell carcinoma | 254 (82.7) |
| Endocervical adenocarcinoma | 47 (15.3) |
| Adenosquamous carcinoma | 6 (2.0) |
| Vital status | |
| Alive | 235 (76.5) |
| Dead | 72 (23.5) |
| Postoperative Treatment | |
| Yes | 103 (33.6) |
| No | 77 (25.1) |
| Clinical stage | |
| I | 163 (53.1) |
| II | 70 (22.8) |
| III | 46 (15.0) |
| IV | 21 (6.8) |
| Morphological type | |
| Non-keratininzing type | 120 (39.1) |
| Keratininzing type | 55 (17.9) |
| Lymphatic invasion | |
| Absent | 72 (23.5) |
| Present | 80 26.1) |
| Human papilloma virus status | |
| Negative | 23 (7.5) |
| Positive (High risk) | 284 (92.5) |
| Hpv 16 | 172 (56.0) |
| Hpv 18 | 39 (12.7) |
| Hpv 45 | 24 (7.8) |
| Hpv etc | 47 (15.3) |
Fig. 1mRNA and protein expression of NOX genes in cervical cancer. a Fold change in mRNA expression in comparison to normal control levels. Data are from The Cancer Genome Atlas. b Relative mRNA expression of NOX genes in cervical cancer patients. c mRNA expression in patients with and without HPV infection. d mRNA expression among patients with HPV 16, HPV 18, and HPV 45. e mRNA expression according to histologic type in squamous cell carcinoma and adenocarcinoma. Six adenosquamous carcinoma cases were excluded from histologic comparison. *p < 0.05; **p < 0.01; ***p < 0.001 by one-way ANOVA to compare more than two groups, or by t-test to compare two groups
Expression of the NADPH oxidase family in patients with cervical cancer
| Symbol | Gene name | Aliases | Chromosome location | Log fold change |
|---|---|---|---|---|
| NOX1 | NADPH Oxidase 1 | Mitogenic Oxidase (Pyridine Nucleotide-Dependent Superoxide-Generating) | Xq22.1 | 1.21 |
| NOX2 | NADPH Oxidase 2 | CYBB (Cytochrome B-245 Beta Chain), Superoxide-Generating NADPH Oxidase Heavy Chain Subunit, Heme-Binding Membrane Glycoprotein Gp91phox, Neutrophil Cytochrome B 91 KDa Polypeptide | Xp21.1 | 2.50 |
| NOX3 | NADPH Oxidase 3 | Mitogenic Oxidase 2, NADPH Oxidase Catalytic Subunit-Like 3 | 6q25.3 | NA |
| NOX4 | NADPH Oxidase 4 | Kidney Superoxide-Producing NADPH Oxidase, Kidney Oxidase-1 | 11q14.3 | 0.17 |
| NOX5 | NADPH Oxidase 5 | NADPH Oxidase, EF-Hand Calcium Binding Domain 5 | 15q23 | 1.21 |
| DUOX1 | Dual Oxidase 1 | NADPH Thyroid Oxidase 1, Nicotinamide Adenine Dinucleotide Phosphate Oxidase, Flavoprotein NADPH Oxidase, Large NOX 1, Long NOX 1 | 15q21.1 | 57.9 |
| DUOX2 | Dual Oxidase 2 | NADPH Thyroid Oxidase 2, Nicotinamide Adenine Dinucleotide Phosphate Oxidase | 15q21.1 | 67.5 |
Fig. 2Survival analysis of cervical cancer patients based on GEPIA data. a Kaplan–Meier survival analysis conducted with high and low mRNA expression of DUOX1, DUOX2, and NOX2 regarding their associations with overall survival (b) Kaplan–Meier survival analysis conducted with high and low mRNA expression of DUOX1, DUOX2, and NOX2 regarding their associations with disease-free survival
Fig. 3Gene set enrichment analysis and map visualization for DUOX1 and NOX2 in cervical cancer. a Representative GSEA data with p values for DUOX1 and NOX2 was shown. b Enrichment maps of DUOX1 and NOX2 in KEGG pathways. Red nodes represent enrichment in the former, whereas blue nodes represent enrichment in the latter. Color intensity is proportional to the degree of enrichment, and clusters represent functionally related gene sets. Data are for the 10% of samples with the most strongly upregulated DUOX1 and NOX expression and the 10% of samples with the most strongly downregulated DUOX1 and NOX expression. The NES (Normalized Enrichment Score) computes the density of modified genes in the dataset with the random expectancies, normalized by the number of genes found in a given gene cluster, to take into account the size of the cluster
Hallmark pathways of DUOX1 and NOX2 in cervical cancer
| Term | Size | ES | NES | NOM |
|---|---|---|---|---|
| DUOX1 – Hallmark pathways up | ||||
| HALLMARK_INTERFERON_ALPHA_RESPONSE | 97 | 0.57 | 2.17 | 0.00 |
| HALLMARK_INTERFERON_GAMMA_RESPONSE | 199 | 0.44 | 1.85 | 0.00 |
| HALLMARK_ESTROGEN_RESPONSE_EARLY | 197 | 0.39 | 1.63 | 0.00 |
| HALLMARK_ESTROGEN_RESPONSE_LATE | 200 | 0.37 | 1.56 | 0.00 |
| HALLMARK_INFLAMMATORY_RESPONSE | 200 | 0.29 | 1.19 | 0.09 |
| HALLMARK_TNFA_SIGNALING_VIA_NFKB | 200 | 0.27 | 1.12 | 0.17 |
| DUOX1 – Hallmark pathways down | ||||
| HALLMARK_EPITHELIAL_MESENCHYMAL_TRANSITION | 199 | −0.59 | −2.43 | 0.00 |
| HALLMARK_ANGIOGENESIS | 36 | −0.51 | −1.62 | 0.01 |
| HALLMARK_HEDGEHOG_SIGNALING | 36 | −0.47 | −1.49 | 0.04 |
| HALLMARK_KRAS_SIGNALING_UP | 200 | −0.34 | −1.41 | 0.01 |
| HALLMARK_WNT_BETA_CATENIN_SIGNALING | 42 | −0.39 | − 1.29 | 0.11 |
| HALLMARK_APICAL_JUNCTION | 200 | −0.30 | −1.27 | 0.03 |
| NOX2– Hallmark pathways up | ||||
| HALLMARK_INTERFERON_GAMMA_RESPONSE | 199 | 0.80 | 2.93 | 0.00 |
| HALLMARK_INFLAMMATORY_RESPONSE | 200 | 0.77 | 2.77 | 0.00 |
| HALLMARK_INTERFERON_ALPHA_RESPONSE | 97 | 0.81 | 2.69 | 0.00 |
| HALLMARK_IL6_JAK_STAT3_SIGNALING | 87 | 0.76 | 2.47 | 0.00 |
| HALLMARK_IL2_STAT5_SIGNALING | 198 | 0.63 | 2.30 | 0.00 |
| HALLMARK_TNFA_SIGNALING_VIA_NFKB | 200 | 0.63 | 2.29 | 0.00 |
| NOX2– Hallmark pathways down | ||||
| HALLMARK_GLYCOLYSIS | 199 | −0.36 | −1.50 | 0.00 |
| HALLMARK_NOTCH_SIGNALING | 32 | −0.34 | −1.05 | 0.37 |
| HALLMARK_HEDGEHOG_SIGNALING | 36 | −0.28 | −0.89 | 0.65 |
| HALLMARK_FATTY_ACID_METABOLISM | 156 | −0.22 | −0.88 | 0.80 |
| HALLMARK_PROTEIN_SECRETION | 96 | −0.22 | −0.83 | 0.89 |
| HALLMARK_G2M_CHECKPOINT | 194 | −0.12 | −0.52 | 1.00 |
Fig. 4Immune cell signatures in cervical cancer patients with DUOX1 and NOX2 expression. Estimated mRNA percentages of 22 immune cell subsets (LM22 signature), as calculated by CIBERSORT, in cervical cancer patients with DUOX1 and NOX2 gene expression. a Relative percentages of LM 22 signature subsets in patients with DUOX1 and NOX2 gene expression. b Immunohistochemical staining of DUOX1 and NOX2 adapted from Human Protein Atlas. c Relative percentages of immune cells in patients with high and low DUOX1 mRNA expression. d Relative percentages of immune cells in patients with high and low NOX2 mRNA expression