Literature DB >> 31705054

Transcriptomic networks implicate neuronal energetic abnormalities in three mouse models harboring autism and schizophrenia-associated mutations.

Thomas Werge1,2,3,4, Daniel H Geschwind5,6,7,8, Aaron Gordon9, Annika Forsingdal10,11, Ib Vestergaard Klewe10, Jacob Nielsen10, Michael Didriksen10.   

Abstract

Genetic risk for psychiatric illness is complex, so identification of shared molecular pathways where distinct forms of genetic risk might coincide is of substantial interest. A growing body of genetic and genomic studies suggest that such shared molecular pathways exist across disorders with different clinical presentations, such as schizophrenia and autism spectrum disorder (ASD). But how this relates to specific genetic risk factors is unknown. Further, whether some of the molecular changes identified in brain relate to potentially confounding antemortem or postmortem factors are difficult to prove. We analyzed the transcriptome from the cortex and hippocampus of three mouse lines modeling human copy number variants (CNVs) associated with schizophrenia and ASD: Df(h15q13)/+, Df(h22q11)/+, and Df(h1q21)/+ which carry the 15q13.3 deletion, 22q11.2 deletion, and 1q21.1 deletion, respectively. Although we found very little overlap of differential expression at the level of individual genes, gene network analysis identified two cortical and two hippocampal modules of co-expressed genes that were dysregulated across all three mouse models. One cortical module was associated with neuronal energetics and firing rate, and overlapped with changes identified in postmortem human brain from SCZ and ASD patients. These data highlight aspects of convergent gene expression in mouse models harboring major risk alleles, and strengthen the connection between changes in neuronal energetics and neuropsychiatric disorders in humans.

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Year:  2019        PMID: 31705054     DOI: 10.1038/s41380-019-0576-0

Source DB:  PubMed          Journal:  Mol Psychiatry        ISSN: 1359-4184            Impact factor:   15.992


  79 in total

Review 1.  Genetics and genomics of psychiatric disease.

Authors:  Daniel H Geschwind; Jonathan Flint
Journal:  Science       Date:  2015-09-24       Impact factor: 47.728

Review 2.  Animal models of neuropsychiatric disorders.

Authors:  Eric J Nestler; Steven E Hyman
Journal:  Nat Neurosci       Date:  2010-09-27       Impact factor: 24.884

3.  Prevalence of rearrangements in the 22q11.2 region and population-based risk of neuropsychiatric and developmental disorders in a Danish population: a case-cohort study.

Authors:  Line Olsen; Thomas Sparsø; Shantel M Weinsheimer; Marcelo Bertalan Quintanilha Dos Santos; Wiktor Mazin; Anders Rosengren; Xabier Calle Sanchez; Louise K Hoeffding; Henriette Schmock; Marie Baekvad-Hansen; Jonas Bybjerg-Grauholm; Mark J Daly; Benjamin M Neale; Marianne G Pedersen; Esben Agerbo; Ole Mors; Anders Børglum; Merete Nordentoft; David M Hougaard; Preben Bo Mortensen; Daniel H Geschwind; Carsten Pedersen; Wesley K Thompson; Thomas Werge
Journal:  Lancet Psychiatry       Date:  2018-06-07       Impact factor: 27.083

Review 4.  CNV biology in neurodevelopmental disorders.

Authors:  Toru Takumi; Kota Tamada
Journal:  Curr Opin Neurobiol       Date:  2018-01-11       Impact factor: 6.627

5.  Shared molecular neuropathology across major psychiatric disorders parallels polygenic overlap.

Authors:  Michael J Gandal; Jillian R Haney; Neelroop N Parikshak; Virpi Leppa; Gokul Ramaswami; Chris Hartl; Andrew J Schork; Vivek Appadurai; Alfonso Buil; Thomas M Werge; Chunyu Liu; Kevin P White; Steve Horvath; Daniel H Geschwind
Journal:  Science       Date:  2018-02-09       Impact factor: 47.728

6.  Developmental and genetic regulation of the human cortex transcriptome illuminate schizophrenia pathogenesis.

Authors:  Andrew E Jaffe; Richard E Straub; Joo Heon Shin; Ran Tao; Yuan Gao; Leonardo Collado-Torres; Tony Kam-Thong; Hualin S Xi; Jie Quan; Qiang Chen; Carlo Colantuoni; William S Ulrich; Brady J Maher; Amy Deep-Soboslay; Alan J Cross; Nicholas J Brandon; Jeffrey T Leek; Thomas M Hyde; Joel E Kleinman; Daniel R Weinberger
Journal:  Nat Neurosci       Date:  2018-07-26       Impact factor: 24.884

Review 7.  Defining the Genetic, Genomic, Cellular, and Diagnostic Architectures of Psychiatric Disorders.

Authors:  Patrick F Sullivan; Daniel H Geschwind
Journal:  Cell       Date:  2019-03-21       Impact factor: 41.582

8.  A mouse model that recapitulates cardinal features of the 15q13.3 microdeletion syndrome including schizophrenia- and epilepsy-related alterations.

Authors:  Kim Fejgin; Jacob Nielsen; Michelle R Birknow; Jesper F Bastlund; Vibeke Nielsen; Jes B Lauridsen; Hreinn Stefansson; Stacy Steinberg; Helge B D Sorensen; Troels E Mortensen; Peter H Larsen; Ib V Klewe; Søren V Rasmussen; Kari Stefansson; Thomas M Werge; Pekka Kallunki; Kenneth V Christensen; Michael Didriksen
Journal:  Biol Psychiatry       Date:  2013-10-03       Impact factor: 13.382

9.  Contribution of copy number variants to schizophrenia from a genome-wide study of 41,321 subjects.

Authors:  Christian R Marshall; Daniel P Howrigan; Daniele Merico; Bhooma Thiruvahindrapuram; Wenting Wu; Douglas S Greer; Danny Antaki; Aniket Shetty; Peter A Holmans; Dalila Pinto; Madhusudan Gujral; William M Brandler; Dheeraj Malhotra; Zhouzhi Wang; Karin V Fuentes Fajarado; Michelle S Maile; Stephan Ripke; Ingrid Agartz; Margot Albus; Madeline Alexander; Farooq Amin; Joshua Atkins; Silviu A Bacanu; Richard A Belliveau; Sarah E Bergen; Marcelo Bertalan; Elizabeth Bevilacqua; Tim B Bigdeli; Donald W Black; Richard Bruggeman; Nancy G Buccola; Randy L Buckner; Brendan Bulik-Sullivan; William Byerley; Wiepke Cahn; Guiqing Cai; Murray J Cairns; Dominique Campion; Rita M Cantor; Vaughan J Carr; Noa Carrera; Stanley V Catts; Kimberley D Chambert; Wei Cheng; C Robert Cloninger; David Cohen; Paul Cormican; Nick Craddock; Benedicto Crespo-Facorro; James J Crowley; David Curtis; Michael Davidson; Kenneth L Davis; Franziska Degenhardt; Jurgen Del Favero; Lynn E DeLisi; Dimitris Dikeos; Timothy Dinan; Srdjan Djurovic; Gary Donohoe; Elodie Drapeau; Jubao Duan; Frank Dudbridge; Peter Eichhammer; Johan Eriksson; Valentina Escott-Price; Laurent Essioux; Ayman H Fanous; Kai-How Farh; Martilias S Farrell; Josef Frank; Lude Franke; Robert Freedman; Nelson B Freimer; Joseph I Friedman; Andreas J Forstner; Menachem Fromer; Giulio Genovese; Lyudmila Georgieva; Elliot S Gershon; Ina Giegling; Paola Giusti-Rodríguez; Stephanie Godard; Jacqueline I Goldstein; Jacob Gratten; Lieuwe de Haan; Marian L Hamshere; Mark Hansen; Thomas Hansen; Vahram Haroutunian; Annette M Hartmann; Frans A Henskens; Stefan Herms; Joel N Hirschhorn; Per Hoffmann; Andrea Hofman; Hailiang Huang; Masashi Ikeda; Inge Joa; Anna K Kähler; René S Kahn; Luba Kalaydjieva; Juha Karjalainen; David Kavanagh; Matthew C Keller; Brian J Kelly; James L Kennedy; Yunjung Kim; James A Knowles; Bettina Konte; Claudine Laurent; Phil Lee; S Hong Lee; Sophie E Legge; Bernard Lerer; Deborah L Levy; Kung-Yee Liang; Jeffrey Lieberman; Jouko Lönnqvist; Carmel M Loughland; Patrik K E Magnusson; Brion S Maher; Wolfgang Maier; Jacques Mallet; Manuel Mattheisen; Morten Mattingsdal; Robert W McCarley; Colm McDonald; Andrew M McIntosh; Sandra Meier; Carin J Meijer; Ingrid Melle; Raquelle I Mesholam-Gately; Andres Metspalu; Patricia T Michie; Lili Milani; Vihra Milanova; Younes Mokrab; Derek W Morris; Bertram Müller-Myhsok; Kieran C Murphy; Robin M Murray; Inez Myin-Germeys; Igor Nenadic; Deborah A Nertney; Gerald Nestadt; Kristin K Nicodemus; Laura Nisenbaum; Annelie Nordin; Eadbhard O'Callaghan; Colm O'Dushlaine; Sang-Yun Oh; Ann Olincy; Line Olsen; F Anthony O'Neill; Jim Van Os; Christos Pantelis; George N Papadimitriou; Elena Parkhomenko; Michele T Pato; Tiina Paunio; Diana O Perkins; Tune H Pers; Olli Pietiläinen; Jonathan Pimm; Andrew J Pocklington; John Powell; Alkes Price; Ann E Pulver; Shaun M Purcell; Digby Quested; Henrik B Rasmussen; Abraham Reichenberg; Mark A Reimers; Alexander L Richards; Joshua L Roffman; Panos Roussos; Douglas M Ruderfer; Veikko Salomaa; Alan R Sanders; Adam Savitz; Ulrich Schall; Thomas G Schulze; Sibylle G Schwab; Edward M Scolnick; Rodney J Scott; Larry J Seidman; Jianxin Shi; Jeremy M Silverman; Jordan W Smoller; Erik Söderman; Chris C A Spencer; Eli A Stahl; Eric Strengman; Jana Strohmaier; T Scott Stroup; Jaana Suvisaari; Dragan M Svrakic; Jin P Szatkiewicz; Srinivas Thirumalai; Paul A Tooney; Juha Veijola; Peter M Visscher; John Waddington; Dermot Walsh; Bradley T Webb; Mark Weiser; Dieter B Wildenauer; Nigel M Williams; Stephanie Williams; Stephanie H Witt; Aaron R Wolen; Brandon K Wormley; Naomi R Wray; Jing Qin Wu; Clement C Zai; Rolf Adolfsson; Ole A Andreassen; Douglas H R Blackwood; Elvira Bramon; Joseph D Buxbaum; Sven Cichon; David A Collier; Aiden Corvin; Mark J Daly; Ariel Darvasi; Enrico Domenici; Tõnu Esko; Pablo V Gejman; Michael Gill; Hugh Gurling; Christina M Hultman; Nakao Iwata; Assen V Jablensky; Erik G Jönsson; Kenneth S Kendler; George Kirov; Jo Knight; Douglas F Levinson; Qingqin S Li; Steven A McCarroll; Andrew McQuillin; Jennifer L Moran; Bryan J Mowry; Markus M Nöthen; Roel A Ophoff; Michael J Owen; Aarno Palotie; Carlos N Pato; Tracey L Petryshen; Danielle Posthuma; Marcella Rietschel; Brien P Riley; Dan Rujescu; Pamela Sklar; David St Clair; James T R Walters; Thomas Werge; Patrick F Sullivan; Michael C O'Donovan; Stephen W Scherer; Benjamin M Neale; Jonathan Sebat
Journal:  Nat Genet       Date:  2016-11-21       Impact factor: 38.330

Review 10.  The road to precision psychiatry: translating genetics into disease mechanisms.

Authors:  Michael J Gandal; Virpi Leppa; Hyejung Won; Neelroop N Parikshak; Daniel H Geschwind
Journal:  Nat Neurosci       Date:  2016-10-26       Impact factor: 24.884

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  9 in total

1.  Convergent and distributed effects of the 3q29 deletion on the human neural transcriptome.

Authors:  Esra Sefik; Ryan H Purcell; Elaine F Walker; Gary J Bassell; Jennifer G Mulle
Journal:  Transl Psychiatry       Date:  2021-06-15       Impact factor: 6.222

2.  Prioritizing Genetic Contributors to Cortical Alterations in 22q11.2 Deletion Syndrome Using Imaging Transcriptomics.

Authors:  Jennifer K Forsyth; Eva Mennigen; Amy Lin; Daqiang Sun; Ariana Vajdi; Leila Kushan-Wells; Christopher R K Ching; Julio E Villalon-Reina; Paul M Thompson; Carrie E Bearden
Journal:  Cereb Cortex       Date:  2021-06-10       Impact factor: 5.357

Review 3.  The Brain Is Adaptive Not Triune: How the Brain Responds to Threat, Challenge, and Change.

Authors:  Patrick R Steffen; Dawson Hedges; Rebekka Matheson
Journal:  Front Psychiatry       Date:  2022-04-01       Impact factor: 5.435

4.  Altered gene expression profiles impair the nervous system development in individuals with 15q13.3 microdeletion.

Authors:  Marek B Körner; Akhil Velluva; Linnaeus Bundalian; Maximilian Radtke; Chen-Ching Lin; Pia Zacher; Tobias Bartolomaeus; Anna S Kirstein; Achmed Mrestani; Nicole Scholz; Konrad Platzer; Anne-Christin Teichmann; Julia Hentschel; Tobias Langenhan; Johannes R Lemke; Antje Garten; Rami Abou Jamra; Diana Le Duc
Journal:  Sci Rep       Date:  2022-08-05       Impact factor: 4.996

Review 5.  Copy number variation and neuropsychiatric illness.

Authors:  Elliott Rees; George Kirov
Journal:  Curr Opin Genet Dev       Date:  2021-03-19       Impact factor: 5.578

Review 6.  The Metallome as a Link Between the "Omes" in Autism Spectrum Disorders.

Authors:  Janelle E Stanton; Sigita Malijauskaite; Kieran McGourty; Andreas M Grabrucker
Journal:  Front Mol Neurosci       Date:  2021-07-05       Impact factor: 5.639

7.  Network Effects of the 15q13.3 Microdeletion on the Transcriptome and Epigenome in Human-Induced Neurons.

Authors:  Siming Zhang; Xianglong Zhang; Carolin Purmann; Shining Ma; Anima Shrestha; Kasey N Davis; Marcus Ho; Yiling Huang; Reenal Pattni; Wing Hung Wong; Jonathan A Bernstein; Joachim Hallmayer; Alexander E Urban
Journal:  Biol Psychiatry       Date:  2020-07-01       Impact factor: 12.810

Review 8.  Genetic contributions to autism spectrum disorder.

Authors:  A Havdahl; M Niarchou; A Starnawska; M Uddin; C van der Merwe; V Warrier
Journal:  Psychol Med       Date:  2021-02-26       Impact factor: 7.723

Review 9.  Transcriptomic Insight Into the Polygenic Mechanisms Underlying Psychiatric Disorders.

Authors:  Leanna M Hernandez; Minsoo Kim; Gil D Hoftman; Jillian R Haney; Luis de la Torre-Ubieta; Bogdan Pasaniuc; Michael J Gandal
Journal:  Biol Psychiatry       Date:  2020-06-12       Impact factor: 13.382

  9 in total

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