Literature DB >> 31696269

Deep convolutional neural network applied to the liver imaging reporting and data system (LI-RADS) version 2014 category classification: a pilot study.

Rikiya Yamashita1, Amber Mittendorf2, Zhe Zhu2, Kathryn J Fowler3, Cynthia S Santillan3, Claude B Sirlin3, Mustafa R Bashir2,4,5, Richard K G Do6.   

Abstract

PURPOSE: To develop a deep convolutional neural network (CNN) model to categorize multiphase CT and MRI liver observations using the liver imaging reporting and data system (LI-RADS) (version 2014).
METHODS: A pre-existing dataset comprising 314 hepatic observations (163 CT, 151 MRI) with corresponding diameters and LI-RADS categories (LR-1-5) assigned in consensus by two LI-RADS steering committee members was used to develop two CNNs: pre-trained network with an input of triple-phase images (training with transfer learning) and custom-made network with an input of quadruple-phase images (training from scratch). The dataset was randomly split into training, validation, and internal test sets (70:15:15 split). The overall accuracy and area under receiver operating characteristic curve (AUROC) were assessed for categorizing LR-1/2, LR-3, LR-4, and LR-5. External validation was performed for the model with the better performance on the internal test set using two external datasets (EXT-CT and EXT-MR: 68 and 44 observations, respectively).
RESULTS: The transfer learning model outperformed the custom-made model: overall accuracy of 60.4% and AUROCs of 0.85, 0.90, 0.63, 0.82 for LR-1/2, LR-3, LR-4, LR-5, respectively. On EXT-CT, the model had an overall accuracy of 41.2% and AUROCs of 0.70, 0.66, 0.60, 0.76 for LR-1/2, LR-3, LR-4, LR-5, respectively. On EXT-MR, the model had an overall accuracy of 47.7% and AUROCs of 0.88, 0.74, 0.69, 0.79 for LR-1/2, LR-3, LR-4, LR-5, respectively.
CONCLUSION: Our study shows the feasibility of CNN for assigning LI-RADS categories from a relatively small dataset but highlights the challenges of model development and validation.

Entities:  

Keywords:  Deep learning; Hepatocellular carcinoma; Magnetic resonance imaging; X-ray computed tomography

Mesh:

Year:  2020        PMID: 31696269      PMCID: PMC6946904          DOI: 10.1007/s00261-019-02306-7

Source DB:  PubMed          Journal:  Abdom Radiol (NY)


  15 in total

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2.  Repeatability of diagnostic features and scoring systems for hepatocellular carcinoma by using MR imaging.

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Journal:  Radiology       Date:  2014-02-18       Impact factor: 11.105

3.  Reliability, Validity, and Reader Acceptance of LI-RADS-An In-depth Analysis.

Authors:  Borna K Barth; Olivio F Donati; Michael A Fischer; Erika J Ulbrich; Christoph A Karlo; Anton Becker; Burkhard Seifert; Caecilia S Reiner
Journal:  Acad Radiol       Date:  2016-05-09       Impact factor: 3.173

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Journal:  JAMA       Date:  2016-12-13       Impact factor: 56.272

5.  Interobserver and intermodality agreement of standardized algorithms for non-invasive diagnosis of hepatocellular carcinoma in high-risk patients: CEUS-LI-RADS versus MRI-LI-RADS.

Authors:  Barbara Schellhaas; Matthias Hammon; Deike Strobel; Lukas Pfeifer; Christian Kielisch; Ruediger S Goertz; Alexander Cavallaro; Rolf Janka; Markus F Neurath; Michael Uder; Hannes Seuss
Journal:  Eur Radiol       Date:  2018-04-19       Impact factor: 5.315

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Authors:  Sasank Chilamkurthy; Rohit Ghosh; Swetha Tanamala; Mustafa Biviji; Norbert G Campeau; Vasantha Kumar Venugopal; Vidur Mahajan; Pooja Rao; Prashant Warier
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Authors:  Babak Ehteshami Bejnordi; Mitko Veta; Paul Johannes van Diest; Bram van Ginneken; Nico Karssemeijer; Geert Litjens; Jeroen A W M van der Laak; Meyke Hermsen; Quirine F Manson; Maschenka Balkenhol; Oscar Geessink; Nikolaos Stathonikos; Marcory Crf van Dijk; Peter Bult; Francisco Beca; Andrew H Beck; Dayong Wang; Aditya Khosla; Rishab Gargeya; Humayun Irshad; Aoxiao Zhong; Qi Dou; Quanzheng Li; Hao Chen; Huang-Jing Lin; Pheng-Ann Heng; Christian Haß; Elia Bruni; Quincy Wong; Ugur Halici; Mustafa Ümit Öner; Rengul Cetin-Atalay; Matt Berseth; Vitali Khvatkov; Alexei Vylegzhanin; Oren Kraus; Muhammad Shaban; Nasir Rajpoot; Ruqayya Awan; Korsuk Sirinukunwattana; Talha Qaiser; Yee-Wah Tsang; David Tellez; Jonas Annuscheit; Peter Hufnagl; Mira Valkonen; Kimmo Kartasalo; Leena Latonen; Pekka Ruusuvuori; Kaisa Liimatainen; Shadi Albarqouni; Bharti Mungal; Ami George; Stefanie Demirci; Nassir Navab; Seiryo Watanabe; Shigeto Seno; Yoichi Takenaka; Hideo Matsuda; Hady Ahmady Phoulady; Vassili Kovalev; Alexander Kalinovsky; Vitali Liauchuk; Gloria Bueno; M Milagro Fernandez-Carrobles; Ismael Serrano; Oscar Deniz; Daniel Racoceanu; Rui Venâncio
Journal:  JAMA       Date:  2017-12-12       Impact factor: 56.272

8.  Dermatologist-level classification of skin cancer with deep neural networks.

Authors:  Andre Esteva; Brett Kuprel; Roberto A Novoa; Justin Ko; Susan M Swetter; Helen M Blau; Sebastian Thrun
Journal:  Nature       Date:  2017-01-25       Impact factor: 49.962

9.  Deep Learning with Convolutional Neural Network for Differentiation of Liver Masses at Dynamic Contrast-enhanced CT: A Preliminary Study.

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10.  Variable generalization performance of a deep learning model to detect pneumonia in chest radiographs: A cross-sectional study.

Authors:  John R Zech; Marcus A Badgeley; Manway Liu; Anthony B Costa; Joseph J Titano; Eric Karl Oermann
Journal:  PLoS Med       Date:  2018-11-06       Impact factor: 11.069

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  6 in total

Review 1.  Up-to-Date Role of CT/MRI LI-RADS in Hepatocellular Carcinoma.

Authors:  Guilherme Moura Cunha; Victoria Chernyak; Kathryn J Fowler; Claude B Sirlin
Journal:  J Hepatocell Carcinoma       Date:  2021-05-31

2.  Prognostic role of artificial intelligence among patients with hepatocellular cancer: A systematic review.

Authors:  Quirino Lai; Gabriele Spoletini; Gianluca Mennini; Zoe Larghi Laureiro; Diamantis I Tsilimigras; Timothy Michael Pawlik; Massimo Rossi
Journal:  World J Gastroenterol       Date:  2020-11-14       Impact factor: 5.742

Review 3.  Imaging diagnosis of hepatocellular carcinoma: Future directions with special emphasis on hepatobiliary magnetic resonance imaging and contrast-enhanced ultrasound.

Authors:  Junghoan Park; Jeong Min Lee; Tae-Hyung Kim; Jeong Hee Yoon
Journal:  Clin Mol Hepatol       Date:  2021-12-27

4.  Deep Learning for Accurate Diagnosis of Liver Tumor Based on Magnetic Resonance Imaging and Clinical Data.

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Journal:  Front Oncol       Date:  2020-05-28       Impact factor: 6.244

5.  A novel computer-aided diagnostic system for accurate detection and grading of liver tumors.

Authors:  Ahmed Alksas; Mohamed Shehata; Gehad A Saleh; Ahmed Shaffie; Ahmed Soliman; Mohammed Ghazal; Adel Khelifi; Hadil Abu Khalifeh; Ahmed Abdel Razek; Guruprasad A Giridharan; Ayman El-Baz
Journal:  Sci Rep       Date:  2021-06-23       Impact factor: 4.379

6.  A Semi-Automatic Step-by-Step Expert-Guided LI-RADS Grading System Based on Gadoxetic Acid-Enhanced MRI.

Authors:  Ruofan Sheng; Jing Huang; Weiguo Zhang; Kaipu Jin; Li Yang; Huanhuan Chong; Jia Fan; Jian Zhou; Dijia Wu; Mengsu Zeng
Journal:  J Hepatocell Carcinoma       Date:  2021-06-29
  6 in total

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