Literature DB >> 31668331

Calculating the Effect of Membrane Thickness on the Lifetime of the Gramicidin A Channel: A Landmark.

Benoît Roux1.   

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Year:  2019        PMID： 31668331      PMCID： PMC7019011          DOI： 10.1016/j.bpj.2019.10.005

Source DB:  PubMed          Journal:  Biophys J        ISSN： 0006-3495            Impact factor:   4.033


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  12 in total

1.  Improved treatment of the protein backbone in empirical force fields.

Authors:  Alexander D MacKerell; Michael Feig; Charles L Brooks
Journal:  J Am Chem Soc       Date:  2004-01-28       Impact factor: 15.419

2.  Dynamics of folded proteins.

Authors:  J A McCammon; B R Gelin; M Karplus
Journal:  Nature       Date:  1977-06-16       Impact factor: 49.962

3.  The gramicidin A transmembrane channel: a proposed pi(L,D) helix.

Authors:  D W Urry
Journal:  Proc Natl Acad Sci U S A       Date:  1971-03       Impact factor: 11.205

4.  Development of the CHARMM Force Field for Lipids.

Authors:  R W Pastor; A D Mackerell
Journal:  J Phys Chem Lett       Date:  2011       Impact factor: 6.475

5.  Structure and dynamics of ion transport through gramicidin A.

Authors:  D H Mackay; P H Berens; K R Wilson; A T Hagler
Journal:  Biophys J       Date:  1984-08       Impact factor: 4.033

6.  Molecular dynamics simulations of a lipid bilayer and of hexadecane: an investigation of membrane fluidity.

Authors:  R M Venable; Y Zhang; B J Hardy; R W Pastor
Journal:  Science       Date:  1993-10-08       Impact factor: 47.728

7.  Optimization of the additive CHARMM all-atom protein force field targeting improved sampling of the backbone φ, ψ and side-chain χ(1) and χ(2) dihedral angles.

Authors:  Robert B Best; Xiao Zhu; Jihyun Shim; Pedro E M Lopes; Jeetain Mittal; Michael Feig; Alexander D Mackerell
Journal:  J Chem Theory Comput       Date:  2012-07-18       Impact factor: 6.006

8.  All-atom empirical potential for molecular modeling and dynamics studies of proteins.

Authors:  A D MacKerell; D Bashford; M Bellott; R L Dunbrack; J D Evanseck; M J Field; S Fischer; J Gao; H Guo; S Ha; D Joseph-McCarthy; L Kuchnir; K Kuczera; F T Lau; C Mattos; S Michnick; T Ngo; D T Nguyen; B Prodhom; W E Reiher; B Roux; M Schlenkrich; J C Smith; R Stote; J Straub; M Watanabe; J Wiórkiewicz-Kuczera; D Yin; M Karplus
Journal:  J Phys Chem B       Date:  1998-04-30       Impact factor: 2.991

9.  Molecular dynamics simulation of the gramicidin channel in a phospholipid bilayer.

Authors:  T B Woolf; B Roux
Journal:  Proc Natl Acad Sci U S A       Date:  1994-11-22       Impact factor: 11.205

10.  Molecular Mechanism for Gramicidin Dimerization and Dissociation in Bilayers of Different Thickness.

Authors:  Delin Sun; Thasin A Peyear; W F Drew Bennett; Olaf S Andersen; Felice C Lightstone; Helgi I Ingólfsson
Journal:  Biophys J       Date:  2019-10-10       Impact factor: 4.033
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