Literature DB >> 31660621

Distributed deep learning across multisite datasets for generalized CT hemorrhage segmentation.

Samuel W Remedios1,2,3,4, Snehashis Roy1, Camilo Bermudez5, Mayur B Patel6, John A Butman2, Bennett A Landman4,5,7, Dzung L Pham1,2.   

Abstract

PURPOSE: As deep neural networks achieve more success in the wide field of computer vision, greater emphasis is being placed on the generalizations of these models for production deployment. With sufficiently large training datasets, models can typically avoid overfitting their data; however, for medical imaging it is often difficult to obtain enough data from a single site. Sharing data between institutions is also frequently nonviable or prohibited due to security measures and research compliance constraints, enforced to guard protected health information (PHI) and patient anonymity.
METHODS: In this paper, we implement cyclic weight transfer with independent datasets from multiple geographically disparate sites without compromising PHI. We compare results between single-site learning (SSL) and multisite learning (MSL) models on testing data drawn from each of the training sites as well as two other institutions.
RESULTS: The MSL model attains an average dice similarity coefficient (DSC) of 0.690 on the holdout institution datasets with a volume correlation of 0.914, respectively corresponding to a 7% and 5% statistically significant improvement over the average of both SSL models, which attained an average DSC of 0.646 and average correlation of 0.871.
CONCLUSIONS: We show that a neural network can be efficiently trained on data from two physically remote sites without consolidating patient data to a single location. The resulting network improves model generalization and achieves higher average DSCs on external datasets than neural networks trained on data from a single source.
© 2019 American Association of Physicists in Medicine.

Entities:  

Keywords:  computed tomography (CT); deep learning; distributed; hemorrhage; image segmentation; lesion; multisite; neural network; traumatic brain injury

Mesh:

Year:  2019        PMID: 31660621      PMCID: PMC6983946          DOI: 10.1002/mp.13880

Source DB:  PubMed          Journal:  Med Phys        ISSN: 0094-2405            Impact factor:   4.071


  26 in total

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3.  Multi-detector row CT attenuation measurements: assessment of intra- and interscanner variability with an anthropomorphic body CT phantom.

Authors:  Bernard A Birnbaum; Nicole Hindman; Julie Lee; James S Babb
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Review 4.  A survey on deep learning in medical image analysis.

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Journal:  Med Image Anal       Date:  2017-07-26       Impact factor: 8.545

5.  Overcoming catastrophic forgetting in neural networks.

Authors:  James Kirkpatrick; Razvan Pascanu; Neil Rabinowitz; Joel Veness; Guillaume Desjardins; Andrei A Rusu; Kieran Milan; John Quan; Tiago Ramalho; Agnieszka Grabska-Barwinska; Demis Hassabis; Claudia Clopath; Dharshan Kumaran; Raia Hadsell
Journal:  Proc Natl Acad Sci U S A       Date:  2017-03-14       Impact factor: 11.205

6.  Deep feature learning for knee cartilage segmentation using a triplanar convolutional neural network.

Authors:  Adhish Prasoon; Kersten Petersen; Christian Igel; François Lauze; Erik Dam; Mads Nielsen
Journal:  Med Image Comput Comput Assist Interv       Date:  2013

7.  Large scale deep learning for computer aided detection of mammographic lesions.

Authors:  Thijs Kooi; Geert Litjens; Bram van Ginneken; Albert Gubern-Mérida; Clara I Sánchez; Ritse Mann; Ard den Heeten; Nico Karssemeijer
Journal:  Med Image Anal       Date:  2016-08-02       Impact factor: 8.545

8.  Automatic atlas-based volume estimation of human brain regions from MR images.

Authors:  N C Andreasen; R Rajarethinam; T Cizadlo; S Arndt; V W Swayze; L A Flashman; D S O'Leary; J C Ehrhardt; W T Yuh
Journal:  J Comput Assist Tomogr       Date:  1996 Jan-Feb       Impact factor: 1.826

9.  Validated automatic brain extraction of head CT images.

Authors:  John Muschelli; Natalie L Ullman; W Andrew Mould; Paul Vespa; Daniel F Hanley; Ciprian M Crainiceanu
Journal:  Neuroimage       Date:  2015-04-07       Impact factor: 6.556

10.  Continual Learning Through Synaptic Intelligence.

Authors:  Friedemann Zenke; Ben Poole; Surya Ganguli
Journal:  Proc Mach Learn Res       Date:  2017
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Journal:  Radiol Artif Intell       Date:  2022-05-04

2.  Active Reprioritization of the Reading Worklist Using Artificial Intelligence Has a Beneficial Effect on the Turnaround Time for Interpretation of Head CT with Intracranial Hemorrhage.

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4.  An optimal deep learning framework for multi-type hemorrhagic lesions detection and quantification in head CT images for traumatic brain injury.

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Review 6.  Artificial intelligence and hybrid imaging: the best match for personalized medicine in oncology.

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