Literature DB >> 31655878

The OpenPicoAmp-100k: an open-source high-performance amplifier for single channel recording in planar lipid bilayers.

Vadim Shlyonsky1,2, David Gall3,4.   

Abstract

We propose an upgraded version of our previously designed open-source lipid bilayer amplifier. This improved amplifier is now suitable both for the use in introductory courses in biophysics and neurosciences at the undergraduate level and for scientific research. Similar to its predecessor, the OpenPicoAmp-100k is designed using the common lithographic printed circuit board fabrication process and off-the-shelf electronic components. It consists of the high-speed headstage, followed by voltage-gain amplifier with built-in 6-order Bessel filter. The amplifier has a bandwidth of 100 kHz in the presence of 100-pF input membrane capacitance and is capable of measuring ion channel current with amplitudes from sub-pA and up to ± 4 nA. At the full bandwidth and with a 1 GΩ transimpedance gain, the amplifier shows 12 pArms noise with an open input and 112 pArms noise in the presence of 100-pF input capacitance, while at the 5-kHz bandwidth (typical in single-channel experiments), noise amounts to 0.45 pArms and 2.11 pArms, respectively. Using an optocoupler circuit producing TTL-controlled current impulses and using 50% threshold analysis, we show that at full bandwidth, the amplifier has deadtimes of 3.5 μs and 5 μs at signal-to-noise ratios (SNR) of 9 and 1.7, respectively. Near 100% of true current impulses longer than 5 μs and 6.6 μs are detected at these two respective SNRs, while false event detection rate remains acceptably low. The wide bandwidth of the amplifier was confirmed in bilayer experiments with alamethicin, for which open ion channel current events shorter that 10 μs could be resolved.

Entities:  

Keywords:  Electronic design; Ion channels; Temporal resolution; Voltage-clamp

Mesh:

Substances:

Year:  2019        PMID: 31655878     DOI: 10.1007/s00424-019-02319-7

Source DB:  PubMed          Journal:  Pflugers Arch        ISSN: 0031-6768            Impact factor:   3.657


  20 in total

1.  Studies on the axon membrane; a new method.

Authors:  G MARMONT
Journal:  J Cell Comp Physiol       Date:  1949-12

2.  Planar microelectrode-cavity array for high-resolution and parallel electrical recording of membrane ionic currents.

Authors:  Gerhard Baaken; Markus Sondermann; Christian Schlemmer; Jürgen Rühe; Jan C Behrends
Journal:  Lab Chip       Date:  2008-04-16       Impact factor: 6.799

3.  TraceSpecks: A Software for Automated Idealization of Noisy Patch-Clamp and Imaging Data.

Authors:  Syed Islamuddin Shah; Angelo Demuro; Don-On Daniel Mak; Ian Parker; John E Pearson; Ghanim Ullah
Journal:  Biophys J       Date:  2018-07-03       Impact factor: 4.033

Review 4.  High bandwidth approaches in nanopore and ion channel recordings - A tutorial review.

Authors:  Andreas J W Hartel; Siddharth Shekar; Peijie Ong; Indra Schroeder; Gerhard Thiel; Kenneth L Shepard
Journal:  Anal Chim Acta       Date:  2019-01-25       Impact factor: 6.558

5.  Discreteness of conductance change in bimolecular lipid membranes in the presence of certain antibiotics.

Authors:  S B Hladky; D A Haydon
Journal:  Nature       Date:  1970-01-31       Impact factor: 49.962

6.  Single-channel current simulation and recording using a photodiode as current generator.

Authors:  D Bertrand; C R Bader; C Distasi; I C Forster
Journal:  J Neurosci Methods       Date:  1989-01       Impact factor: 2.390

7.  Wavelet Denoising of High-Bandwidth Nanopore and Ion-Channel Signals.

Authors:  Siddharth Shekar; Chen-Chi Chien; Andreas Hartel; Peijie Ong; Oliver B Clarke; Andrew Marks; Marija Drndic; Kenneth L Shepard
Journal:  Nano Lett       Date:  2019-01-07       Impact factor: 11.189

8.  Gating transitions in bacterial ion channels measured at 3 microns resolution.

Authors:  George Shapovalov; Henry A Lester
Journal:  J Gen Physiol       Date:  2004-08       Impact factor: 4.086

9.  Wicking: a rapid method for manually inserting ion channels into planar lipid bilayers.

Authors:  Justin A Costa; Dac A Nguyen; Edgar Leal-Pinto; Ronald E Gordon; Basil Hanss
Journal:  PLoS One       Date:  2013-05-23       Impact factor: 3.240

10.  Discrete conductance fluctuations in lipid bilayer protein membranes.

Authors:  R C Bean; W C Shepherd; H Chan; J Eichner
Journal:  J Gen Physiol       Date:  1969-06       Impact factor: 4.086

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.