Literature DB >> 31650318

Toward Data-Driven Learning Healthcare Systems in Interventional Radiology: Implementation to Evaluate Venous Stent Patency.

David M Cohn1, Tarub S Mabud1, Victoria A Arendt2, Andre D Souffrant1, Gyeong S Jeon3, Xiao An4, William T Kuo1, Daniel Y Sze1, Lawrence V Hofmann1, Daniel L Rubin5.   

Abstract

We developed a code and data-driven system (learning healthcare system) for gleaning actionable clinical insight from interventional radiology (IR) data. To this end, we constructed a workflow for the collection, processing and analysis of electronic health record (EHR), imaging, and cancer registry data for a cohort of interventional radiology patients seen in the IR Clinic at our institution over a more than 20-year period. As part of this pipeline, we created a database in REDCap (VITAL) to store raw data, as collected by a team of clinical investigators and the Data Coordinating Center at our university. We developed a single, universal pre-processing codebank for our VITAL data in R; in addition, we also wrote widely extendable and easily modifiable analysis code in R that presents results from summary statistics, statistical tests, visualizations, Kaplan-Meier analyses, and Cox proportional hazard modeling, among other analysis techniques. We present our findings for a test case of supra versus infra-inguinal ligament stenting. The developed pre-processing and analysis pipelines were memory and speed-efficient, with both pipelines running in less than 2 min. Three different supra-inguinal ligament veins had a statistically significant improvement in vein diameters post-stenting versus pre-stenting, while no infra-inguinal ligament veins had a statistically significant improvement (due either to an insufficient sample size or a non-significant p value). However, infra-inguinal ligament stenting was not associated with worse restenosis or patency outcomes in either a univariate (summary-statistics and Kaplan-Meier based) or multivariate (Cox proportional hazard model based) analysis.

Entities:  

Keywords:  Data mining; Inguinal ligament; Interventional radiology; Learning healthcare system

Mesh:

Year:  2020        PMID: 31650318      PMCID: PMC7064698          DOI: 10.1007/s10278-019-00280-6

Source DB:  PubMed          Journal:  J Digit Imaging        ISSN: 0897-1889            Impact factor:   4.056


  9 in total

1.  STRIDE--An integrated standards-based translational research informatics platform.

Authors:  Henry J Lowe; Todd A Ferris; Penni M Hernandez; Susan C Weber
Journal:  AMIA Annu Symp Proc       Date:  2009-11-14

2.  Research electronic data capture (REDCap)--a metadata-driven methodology and workflow process for providing translational research informatics support.

Authors:  Paul A Harris; Robert Taylor; Robert Thielke; Jonathon Payne; Nathaniel Gonzalez; Jose G Conde
Journal:  J Biomed Inform       Date:  2008-09-30       Impact factor: 6.317

3.  Reporting standards for endovascular treatment of lower extremity deep vein thrombosis.

Authors:  Suresh Vedantham; Clement J Grassi; Hector Ferral; Nilesh H Patel; Patricia E Thorpe; Vittorio P Antonacci; Bertrand M Janne d'Othée; Lawrence V Hofmann; John F Cardella; Sanjoy Kundu; Curtis A Lewis; Marc S Schwartzberg; Robert J Min; David Sacks
Journal:  J Vasc Interv Radiol       Date:  2009-07       Impact factor: 3.464

4.  Evaluation of survival data and two new rank order statistics arising in its consideration.

Authors:  N Mantel
Journal:  Cancer Chemother Rep       Date:  1966-03

5.  Placement of a flexible endovascular stent across the femoral joint: an in vivo study in the swine model.

Authors:  R T Andrews; A C Venbrux; C A Magee; D A Bova
Journal:  J Vasc Interv Radiol       Date:  1999-10       Impact factor: 3.464

6.  Complications of iliac artery stent deployment.

Authors:  J L Ballard; S R Sparks; F C Taylor; J J Bergan; D C Smith; T J Bunt; J D Killeen
Journal:  J Vasc Surg       Date:  1996-10       Impact factor: 4.268

7.  Fracture of popliteal artery stents.

Authors:  Erhan Babalik; Murat Gülbaran; Tevfik Gürmen; Servet Oztürk
Journal:  Circ J       Date:  2003-07       Impact factor: 2.993

8.  Censoring in clinical trials: review of survival analysis techniques.

Authors:  Shankar Prinja; Nidhi Gupta; Ramesh Verma
Journal:  Indian J Community Med       Date:  2010-04

9.  Venous stenting across the inguinal ligament.

Authors:  Peter Neglén; T Paul Tackett; Seshadri Raju
Journal:  J Vasc Surg       Date:  2008-09-04       Impact factor: 4.268

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.