| Literature DB >> 31639024 |
Miguel Sampayo-Cordero1, Bernat Miguel-Huguet2, Almudena Pardo-Mateos3, Andrea Malfettone4, José Pérez-García4,5, Antonio Llombart-Cussac4,6, Javier Cortés4,5, Marc Moltó-Abad7, Cecilia Muñoz-Delgado8, Marta Pérez-Quintana9, Jordi Pérez-López7.
Abstract
BACKGROUND: A preliminary exploratory study shows solid agreement between the results of case reports and clinical study meta-analyses in mucopolysaccharidosis Type I (MPS-I) adult patients. The aim of the present study is to confirm previous results in another patient population, suffering from mucopolysaccharidosis Type II (MPS-II).Entities:
Keywords: Case reports; Clinical studies; Enzyme replacement therapy; Evidence-based medicine; Meta-analysis; Mucopolysaccharidosis type II; Systematic review
Mesh:
Substances:
Year: 2019 PMID: 31639024 PMCID: PMC6805333 DOI: 10.1186/s13023-019-1202-6
Source DB: PubMed Journal: Orphanet J Rare Dis ISSN: 1750-1172 Impact factor: 4.123
Fig. 1Flow diagram of case reports of patients with MPS-II published between January 2008 to April 2018
Analysis of number of case reports showing improvement or impairment associated with ERT in a specific outcome, based on the strong confirmatory method
| RANK | Outcomes & (SOE score*) | Nr. [+] / Total cases | FDR 10% Critical value*** | Evidence group**** | |
|---|---|---|---|---|---|
| 1 | uGAGs | 20/44 | < 0.0001 | 0.009 | Acceptable |
| 2 | Liver V | 8/44 | 0.001 | 0.018 | Acceptable |
| 3 | Antibodies | 6/44 | 0.022 | 0.027 | Acceptable |
| 4 | 6MWT (Low) | 4/44 | 0.177 | > 0.036 | Unacceptable |
| 4 | JROM (Insufficient) | 4/44 | 0.177 | > 0.036 | Unacceptable |
| 5 | Growth height (Low) | 3/44 | 0.379 | > 0.045 | Unacceptable |
| 6 | IRR (Low) | 2/44 | 0.653 | > 0.055 | Unacceptable |
| 7 | Pulmonary function (Low) | 1/44 | 0.895 | > 0.064 | Unacceptable |
| 8 | Cardiac (Insufficient) | 0/44 | 1 | > 0.073 | Unacceptable |
| 8 | QoL (Insufficient) | 0/44 | 1 | > 0.073 | Unacceptable |
| 8 | Sleep apnea (Insufficient) | 0/44 | 1 | > 0.073 | Unacceptable |
Legend:The improvement is defined in accordance with the strong confirmatory method. The impairment was declared when an Infusion Related Reaction (IRR) caused a change in ERT dose.
6MWT 6-min walk test, FDR False discovery rate (Benjamini-Hochberg procedure), IRR infusion-related reaction, JROM Joint range of motion, Nr. [+] Number of case reports showing improvement or impairment in IRR with ERT in a specific outcome, QoL Quality of life, SOE Strength of evidence, uGAGs Urinary glycosaminoglycans.
*The SOE classification has been previously published in Bradley et .al [12]
** The analysis assessed whether the percentage of case reports showing a modification in a specific outcome was statistically higher than 5% (null hypothesis, H0). The p-value was performed with one-sided binomial test
*** FDR critical value: Outcomes with p-values lower than FDR critical value are considered as modified by ERT (Multiplicity adjustment). The FDR critical value is calculated ranking the outcomes analyzed from lowest to highest p-value. The rank (r) is divided by number of outcomes and multiplied by the accepted 10% rate of false discoveries. The lowest rank of tied p-values is used because the critical value computed is lower, and it is more conservative to declare a specific outcome as modified by ERT. However, the same outcomes were classified as modified by ERT when the highest or mean rank was used for ties
**** The outcomes that showed a p-value lower than the FDR 10% critical value were classified in the acceptable evidence group (shadow rows). The outcomes that showed a p-value higher than the FDR 10% critical value were classified in an unacceptable evidence group (white rows). In bold: Moderate to high SOE categories
Analysis of number of case reports showing improvement or impairment, associated with ERT in a specific outcome, based on a weak confirmatory method
| RANK | Outcomes & (SOE score*) | Nr. [+] / Total cases | FDR 10% Critical value*** | Evidence group**** | |
|---|---|---|---|---|---|
| 1 | uGAGs | 20/44 | < 0.0001 | < 0.009 | Acceptable |
| 2 | 6MWT (Low) | 15/44 | < 0.0001 | < 0.027 | Acceptable |
| 3 | Liver V | 13/44 | < 0.0001 | < 0.027 | Acceptable |
| 4 | QoL (Insufficient) | 8/44 | 0.014 | < 0.036 | Acceptable |
| 5 | Antibodies | 6/44 | 0.022 | < 0.045 | Acceptable |
| 6 | Growth height (Low) | 5/44 | 0.067 | N.S (> 0.055) | Unacceptable |
| 6 | JROM (Insufficient) | 5/44 | 0.067 | N.S (> 0.055) | Unacceptable |
| 7 | Pulmonary function (Low) | 4/44 | 0.177 | N.S (> 0.072) | Unacceptable |
| 8 | IRR (Low) | 2/44 | 0.653 | N.S (> 0.064) | Unacceptable |
| 9 | Sleep apnea (Insufficient) | 1/44 | 0.895 | N.S (> 0.082) | Unacceptable |
| 10 | Cardiac (Insufficient) | 0/44 | 1 | N.S (> 0.091) | Unacceptable |
Legend:The improvement is defined in accordance with the weak confirmatory method. The impairment was declared when IRR caused a change in ERT dose.
6MWT 6-min walk test, FDR False discovery rate (Benjamini-Hochberg procedure), IRR infusion-related reaction, JROM joint range of motion, Nr. [+] Number of case reports showing improvement or impairment in IRR associated with ERT in a specific outcome, QoL Quality of life, SOE Strength of evidence, uGAGs Urinary glycosaminoglycans.
*The SOE classification has been previously published in Bradley et al. [12]
** The analysis assessed whether the percentage of case reports showing a modification in a specific outcome was statistically higher than 5% (null hypothesis, H0). The p-value was performed with a one-sided binomial test
*** FDR critical value: Outcomes with p-values lower than FDR critical value are considered as modified by ERT (Multiplicity adjustment). The FDR critical value is calculated by ranking the outcomes analyzed from lowest to highest p-value. The rank (r) is divided by number of outcomes and multiplied by the accepted 10% rate of false discoveries. The lowest rank of tied p-values was used because the critical value is computed is lower, and is more conservative for a specific outcome as modified by ERT. However, the same outcomes were classified as modified by ERT when the highest or mean rank was used for ties
**** The outcomes showing a p-value lower than the FDR 10% critical value were classified in acceptable evidence groups (shadow rows). The outcomes showed a p-value higher than the FDR 10% critical value and were classified in unacceptable evidence groups (white rows). In bold: Moderate to high SOE categories
Agreement between the classification of outcomes based on the case report meta-analysis and the SOE classification, based on the clinical study meta-analysis. Strong confirmatory method
| Strength of evidence of clinical study meta-analysis | ||
|---|---|---|
| Number of case reports [+] for the outcome | High to moderate | Low to insufficient |
| ≥ 6 [+] of 44 cases (acceptable evidence group) | (True positives = 3) -uGAGs -Liver Volume -Antibodies | (False positives = 0) |
| < 6 [+] of 44 cases (unacceptable evidence group) | (False negative = 0) | (True negatives = 8) -6MWT, JROM, Growth, IRR, Pulmonary function, Cardiac, QoL, sleep apnea. |
Legend: The 95% confidence interval for the validity index are: positive predictive value: 100% (29 to 100%); negative predictive value: 100% (63 to 100%); sensibility: 100% (29 to 100%), and specificity: 100% (63 to 100%).
6MWT 6-min walk test, CI Confidence interval, IRR Infusion-related reaction, JROM Joint range of motion, NPV Negative predictive value, PPV Positive predictive value, QoL Quality of life, Se Sensitivity, Sp Specificity, SOE Strength of evidence, uGAGs Urinary glycosaminoglycans.
Fig. 2Agreement between the evidence score from the case report meta-analysis and the SOE from the clinical study meta-analysis. Strong confirmatory method. 6MWT: 6-min walk test; CI: Confidence interval; IRR: Infusion-related reaction; JROM: Joint range of motion; QoL: Quality of life; Rho: Spearman correlation coefficient; SOE: Strenght of evidence; uGAGs: Urinary glycosaminoglycans
Sensitivity analysis based on different analysis sets
| Publications / Cases | True (+/−); False (+/−) | Accuracy% | Se% | Sp% | PPV% | NPV% | Rho (95%CI) | |
|---|---|---|---|---|---|---|---|---|
| Primary analysis seta | 25 / 44 | (3/8); (0/0) | 100 | 100 | 100 | 100 | 100 | 82 (43 to 95%) |
| All case reportsb | 38 / 56 | (3/8); (0/0) | 100 | 100 | 100 | 100 | 100 | 83 (47 to 96%) |
| Analyzed in Bradley study excludedc | 22 / 33 | (3/8); (0/0) | 100 | 100 | 100 | 100 | 100 | 82 (43 to 95%) |
| Excluding congress communicationsd | 21 / 36 | (2/8); (0/1e) | 91 | 67 | 100 | 100 | 89 | 82 (43 to 95%) |
Legend: aAll case reports of male MPS-II treated with ERT report efficacy and safety. These cases reports were written in a narrative form (results not aggregated). They were published prior to Bradley bibliographic search
6MWT 6-min walk test, CI Confidence interval, NPV Negative predictive value, PPV Positive predictive value, Rho Spearman correlation coefficient, Se Sensitivity, Sp Specificity.
bAll case reports of male MPS-II treated with ERT report efficacy and safety, despite being published after the bibliographic search for Bradley (31 December 2015)
cAll case reports included in the primary analysis set, excluding all studies also analyzed in the Bradley study
dAll case reports included in the primary analysis set, excluding all congress communications
eDevelopment of antibodies was an outcome that did not show a significant modification, although it was classified as high to moderate SOE in the Bradley study.