Literature DB >> 31633690

Lentiviral CRISPR/Cas9-Mediated Genome Editing for the Study of Hematopoietic Cells in Disease Models.

Soichi Sano1, Ying Wang1, Megan A Evans1, Yoshimitsu Yura1, Miho Sano1, Hayato Ogawa1, Keita Horitani1, Heather Doviak1, Kenneth Walsh2.   

Abstract

Manipulating genes in hematopoietic stem cells using conventional transgenesis approaches can be time-consuming, expensive, and challenging. Benefiting from advances in genome editing technology and lentivirus-mediated transgene delivery systems, an efficient and economical method is described here that establishes mice in which genes are manipulated specifically in hematopoietic stem cells. Lentiviruses are used to transduce Cas9-expressing lineage-negative bone marrow cells with a guide RNA (gRNA) targeting specific genes and a red fluorescence reporter gene (RFP), then these cells are transplanted into lethally-irradiated C57BL/6 mice. Mice transplanted with lentivirus expressing non-targeting gRNA are used as controls. Engraftment of transduced hematopoietic stem cells are evaluated by flow cytometric analysis of RFP-positive leukocytes of peripheral blood. Using this method, ~90% transduction of myeloid cells and ~70% of lymphoid cells at 4 weeks after transplantation can be achieved. Genomic DNA is isolated from RFP-positive blood cells, and portions of the targeted site DNA are amplified by PCR to validate the genome editing. This protocol provides a high-throughput evaluation of hematopoiesis-regulatory genes and can be extended to a variety of mouse disease models with hematopoietic cell involvement.

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Year:  2019        PMID: 31633690      PMCID: PMC7249700          DOI: 10.3791/59977

Source DB:  PubMed          Journal:  J Vis Exp        ISSN: 1940-087X            Impact factor:   1.355


  30 in total

1.  One-step generation of mice carrying reporter and conditional alleles by CRISPR/Cas-mediated genome engineering.

Authors:  Hui Yang; Haoyi Wang; Chikdu S Shivalila; Albert W Cheng; Linyu Shi; Rudolf Jaenisch
Journal:  Cell       Date:  2013-08-29       Impact factor: 41.582

2.  Efficient CRISPR-mediated mutagenesis in primary immune cells using CrispRGold and a C57BL/6 Cas9 transgenic mouse line.

Authors:  Van Trung Chu; Robin Graf; Tristan Wirtz; Timm Weber; Jeremy Favret; Xun Li; Kerstin Petsch; Ngoc Tung Tran; Michael H Sieweke; Claudia Berek; Ralf Kühn; Klaus Rajewsky
Journal:  Proc Natl Acad Sci U S A       Date:  2016-10-11       Impact factor: 11.205

3.  Transcriptional regulation of vav, a gene expressed throughout the hematopoietic compartment.

Authors:  S Ogilvy; A G Elefanty; J Visvader; M L Bath; A W Harris; J M Adams
Journal:  Blood       Date:  1998-01-15       Impact factor: 22.113

4.  Repurposing CRISPR as an RNA-guided platform for sequence-specific control of gene expression.

Authors:  Lei S Qi; Matthew H Larson; Luke A Gilbert; Jennifer A Doudna; Jonathan S Weissman; Adam P Arkin; Wendell A Lim
Journal:  Cell       Date:  2013-02-28       Impact factor: 41.582

Review 5.  Clonal Hematopoiesis and Its Impact on Cardiovascular Disease.

Authors:  Soichi Sano; Ying Wang; Kenneth Walsh
Journal:  Circ J       Date:  2018-09-04       Impact factor: 2.993

6.  Defective immune responses in mice lacking LUBAC-mediated linear ubiquitination in B cells.

Authors:  Yoshiteru Sasaki; Soichi Sano; Masaki Nakahara; Shigeo Murata; Kohei Kometani; Yuichi Aiba; Shinji Sakamoto; Yoshihiro Watanabe; Keiji Tanaka; Tomohiro Kurosaki; Kazuhiro Iwai
Journal:  EMBO J       Date:  2013-08-13       Impact factor: 11.598

7.  Generation of mouse models of myeloid malignancy with combinatorial genetic lesions using CRISPR-Cas9 genome editing.

Authors:  Dirk Heckl; Monika S Kowalczyk; David Yudovich; Roger Belizaire; Rishi V Puram; Marie E McConkey; Anne Thielke; Jon C Aster; Aviv Regev; Benjamin L Ebert
Journal:  Nat Biotechnol       Date:  2014-06-22       Impact factor: 54.908

8.  Tet2-Mediated Clonal Hematopoiesis Accelerates Heart Failure Through a Mechanism Involving the IL-1β/NLRP3 Inflammasome.

Authors:  Soichi Sano; Kosei Oshima; Ying Wang; Susan MacLauchlan; Yasufumi Katanasaka; Miho Sano; María A Zuriaga; Minoru Yoshiyama; David Goukassian; Matthew A Cooper; José J Fuster; Kenneth Walsh
Journal:  J Am Coll Cardiol       Date:  2018-02-27       Impact factor: 24.094

9.  Cas-OFFinder: a fast and versatile algorithm that searches for potential off-target sites of Cas9 RNA-guided endonucleases.

Authors:  Sangsu Bae; Jeongbin Park; Jin-Soo Kim
Journal:  Bioinformatics       Date:  2014-01-24       Impact factor: 6.937

10.  Easy quantitative assessment of genome editing by sequence trace decomposition.

Authors:  Eva K Brinkman; Tao Chen; Mario Amendola; Bas van Steensel
Journal:  Nucleic Acids Res       Date:  2014-10-09       Impact factor: 16.971

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  8 in total

1.  Hematopoietic loss of Y chromosome leads to cardiac fibrosis and heart failure mortality.

Authors:  Soichi Sano; Keita Horitani; Hayato Ogawa; Jonatan Halvardson; Nicholas W Chavkin; Ying Wang; Miho Sano; Jonas Mattisson; Atsushi Hata; Marcus Danielsson; Emiri Miura-Yura; Ammar Zaghlool; Megan A Evans; Tove Fall; Henry N De Hoyos; Johan Sundström; Yoshimitsu Yura; Anupreet Kour; Yohei Arai; Mark C Thel; Yuka Arai; Josyf C Mychaleckyj; Karen K Hirschi; Lars A Forsberg; Kenneth Walsh
Journal:  Science       Date:  2022-07-14       Impact factor: 63.714

2.  Employing the CRISPR-Cas System for Clonal Hematopoiesis Research.

Authors:  Hayato Ogawa; Soichi Sano; Kenneth Walsh
Journal:  Int J Phys Med Rehabil       Date:  2020-11-30

Review 3.  Importance of clonal hematopoiesis in heart failure.

Authors:  Nicholas W Chavkin; Kyung-Duk Min; Kenneth Walsh
Journal:  Trends Cardiovasc Med       Date:  2021-04-20       Impact factor: 6.677

4.  JAK2 V617F -Mediated Clonal Hematopoiesis Accelerates Pathological Remodeling in Murine Heart Failure.

Authors:  Soichi Sano; Ying Wang; Yoshimitsu Yura; Miho Sano; Kosei Oshima; Yue Yang; Yasufumi Katanasaka; Kyung-Duk Min; Shinobu Matsuura; Katya Ravid; Golam Mohi; Kenneth Walsh
Journal:  JACC Basic Transl Sci       Date:  2019-09-18

Review 5.  Evidence for reciprocal network interactions between injured hearts and cancer.

Authors:  Melisa N Guler; Nathalie M Tscheiller; Maria Sabater-Molina; Juan R Gimeno; Canan G Nebigil
Journal:  Front Cardiovasc Med       Date:  2022-07-15

Review 6.  The role of clonal haematopoiesis in cardiovascular diseases: epidemiology and experimental studies.

Authors:  K D Min; A Kour; S Sano; K Walsh
Journal:  J Intern Med       Date:  2020-07-27       Impact factor: 8.989

Review 7.  Murine models of clonal haematopoiesis to assess mechanisms of cardiovascular disease.

Authors:  Ying Wang; Soichi Sano; Hayato Ogawa; Keita Horitani; Megan A Evans; Yoshimitsu Yura; Emiri Miura-Yura; Heather Doviak; Kenneth Walsh
Journal:  Cardiovasc Res       Date:  2022-05-06       Impact factor: 13.081

8.  The Cancer Therapy-Related Clonal Hematopoiesis Driver Gene Ppm1d Promotes Inflammation and Non-Ischemic Heart Failure in Mice.

Authors:  Yoshimitsu Yura; Emiri Miura-Yura; Yasufumi Katanasaka; Kyung-Duk Min; Nicholas Chavkin; Ariel H Polizio; Hayato Ogawa; Keita Horitani; Heather Doviak; Megan A Evans; Miho Sano; Ying Wang; Katharina Boroviak; George Philippos; Ana Filipa Domingues; George Vassiliou; Soichi Sano; Kenneth Walsh
Journal:  Circ Res       Date:  2021-07-28       Impact factor: 23.213

  8 in total

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