Literature DB >> 31620548

Denoising and contrast-enhancement approach of magnetic resonance imaging glioblastoma brain tumors.

Hiba Mzoughi1,2, Ines Njeh1,3, Mohamed Ben Slima1,4, Ahmed Ben Hamida1,5, Chokri Mhiri6, Kheireddine Ben Mahfoudh7.   

Abstract

We investigate a new preprocessing approach for MRI glioblastoma brain tumors. Based on combined denoising technique (bilateral filter) and contrast-enhancement technique (automatic contrast stretching based on image statistical information), the proposed approach offers competitive results while preserving the tumor region's edges and original image's brightness. In order to evaluate the proposed approach's performance, quantitative evaluation has been realized through the Multimodal Brain Tumor Segmentation (BraTS 2015) dataset. A comparative study between the proposed method and four state-of-the art preprocessing algorithm attests that the proposed approach could yield a competitive performance for magnetic resonance brain glioblastomas tumor preprocessing. In fact, the result of this step of image preprocessing is very crucial for the efficiency of the remaining brain image processing steps: i.e., segmentation, classification, and reconstruction.
© 2019 Society of Photo-Optical Instrumentation Engineers (SPIE).

Entities:  

Keywords:  contrast stretching; glioblastomas; magnetic resonance imaging; preprocessing

Year:  2019        PMID: 31620548      PMCID: PMC6792005          DOI: 10.1117/1.JMI.6.4.044002

Source DB:  PubMed          Journal:  J Med Imaging (Bellingham)        ISSN: 2329-4302


  15 in total

1.  Segmentation of brain MR images through a hidden Markov random field model and the expectation-maximization algorithm.

Authors:  Y Zhang; M Brady; S Smith
Journal:  IEEE Trans Med Imaging       Date:  2001-01       Impact factor: 10.048

2.  Wavelet domain non-linear filtering for MRI denoising.

Authors:  C Shyam Anand; Jyotinder S Sahambi
Journal:  Magn Reson Imaging       Date:  2010-04-24       Impact factor: 2.546

3.  Nonparametric neighborhood statistics for MRI denoising.

Authors:  Suyash P Awate; Ross T Whitaker
Journal:  Inf Process Med Imaging       Date:  2005

4.  Homodyne detection in magnetic resonance imaging.

Authors:  D C Noll; D G Nishimura; A Macovski
Journal:  IEEE Trans Med Imaging       Date:  1991       Impact factor: 10.048

5.  Blind inverse gamma correction.

Authors:  H Farid
Journal:  IEEE Trans Image Process       Date:  2001       Impact factor: 10.856

6.  Noise and signal estimation in magnitude MRI and Rician distributed images: a LMMSE approach.

Authors:  Santiago Aja-Fernandez; Carlos Alberola-Lopez; Carl-Fredrik Westin
Journal:  IEEE Trans Image Process       Date:  2008-08       Impact factor: 10.856

7.  Quantitative validation of anti-PTBP1 antibody for diagnostic neuropathology use: Image analysis approach.

Authors:  Evgin Goceri; Behiye Goksel; James B Elder; Vinay K Puduvalli; Jose J Otero; Metin N Gurcan
Journal:  Int J Numer Method Biomed Eng       Date:  2017-02-10       Impact factor: 2.747

8.  A brain tumor segmentation framework based on outlier detection.

Authors:  Marcel Prastawa; Elizabeth Bullitt; Sean Ho; Guido Gerig
Journal:  Med Image Anal       Date:  2004-09       Impact factor: 8.545

Review 9.  The Multimodal Brain Tumor Image Segmentation Benchmark (BRATS).

Authors:  Bjoern H Menze; Andras Jakab; Stefan Bauer; Jayashree Kalpathy-Cramer; Keyvan Farahani; Justin Kirby; Yuliya Burren; Nicole Porz; Johannes Slotboom; Roland Wiest; Levente Lanczi; Elizabeth Gerstner; Marc-André Weber; Tal Arbel; Brian B Avants; Nicholas Ayache; Patricia Buendia; D Louis Collins; Nicolas Cordier; Jason J Corso; Antonio Criminisi; Tilak Das; Hervé Delingette; Çağatay Demiralp; Christopher R Durst; Michel Dojat; Senan Doyle; Joana Festa; Florence Forbes; Ezequiel Geremia; Ben Glocker; Polina Golland; Xiaotao Guo; Andac Hamamci; Khan M Iftekharuddin; Raj Jena; Nigel M John; Ender Konukoglu; Danial Lashkari; José Antonió Mariz; Raphael Meier; Sérgio Pereira; Doina Precup; Stephen J Price; Tammy Riklin Raviv; Syed M S Reza; Michael Ryan; Duygu Sarikaya; Lawrence Schwartz; Hoo-Chang Shin; Jamie Shotton; Carlos A Silva; Nuno Sousa; Nagesh K Subbanna; Gabor Szekely; Thomas J Taylor; Owen M Thomas; Nicholas J Tustison; Gozde Unal; Flor Vasseur; Max Wintermark; Dong Hye Ye; Liang Zhao; Binsheng Zhao; Darko Zikic; Marcel Prastawa; Mauricio Reyes; Koen Van Leemput
Journal:  IEEE Trans Med Imaging       Date:  2014-12-04       Impact factor: 10.048

10.  The virtual skeleton database: an open access repository for biomedical research and collaboration.

Authors:  Michael Kistler; Serena Bonaretti; Marcel Pfahrer; Roman Niklaus; Philippe Büchler
Journal:  J Med Internet Res       Date:  2013-11-12       Impact factor: 5.428

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  3 in total

1.  Deep Multi-Scale 3D Convolutional Neural Network (CNN) for MRI Gliomas Brain Tumor Classification.

Authors:  Hiba Mzoughi; Ines Njeh; Ali Wali; Mohamed Ben Slima; Ahmed BenHamida; Chokri Mhiri; Kharedine Ben Mahfoudhe
Journal:  J Digit Imaging       Date:  2020-08       Impact factor: 4.056

2.  Extraction of region of interest from brain MRI by converting images into neutrosophic domain using the modified S-function.

Authors:  Zahid Tufail; Ahmad Raza Shahid; Basit Raza; Tahir Akram; Uzair Iqbal Janjua
Journal:  J Med Imaging (Bellingham)       Date:  2021-02-08

Review 3.  Brain Tumor Diagnosis Using Machine Learning, Convolutional Neural Networks, Capsule Neural Networks and Vision Transformers, Applied to MRI: A Survey.

Authors:  Andronicus A Akinyelu; Fulvio Zaccagna; James T Grist; Mauro Castelli; Leonardo Rundo
Journal:  J Imaging       Date:  2022-07-22
  3 in total

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