Literature DB >> 31611420

mRNA Localization in Plant Cells.

Li Tian1, Hong-Li Chou2, Masako Fukuda3,4, Toshihiro Kumamaru4, Thomas W Okita3.   

Abstract

Localization of mRNAs at the subcellular level is an essential mechanism for specific protein targeting and local control of protein synthesis in both eukaryotes and bacteria. While mRNA localization is well documented in metazoans, somatic cells, and microorganisms, only a handful of well-defined mRNA localization examples have been reported in vascular plants and algae. This review summarizes the function and mechanism of mRNA localization and highlights recent studies of mRNA localization in vascular plants. While the emphasis focuses on storage protein mRNA localization in rice endosperm cells, information on targeting of RNAs to organelles (chloroplasts and mitochondria) and plasmodesmata is also discussed.
© 2020 American Society of Plant Biologists. All Rights Reserved.

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Year:  2019        PMID： 31611420      PMCID： PMC6945871          DOI： 10.1104/pp.19.00972

Source DB:  PubMed          Journal:  Plant Physiol        ISSN： 0032-0889            Impact factor:   8.340


  141 in total

Review 1.  Putting RNAs in the right place at the right time: RNA localization in the frog oocyte.

Authors:  Mary Lou King; Timothy J Messitt; Kimberly L Mowry
Journal:  Biol Cell       Date:  2005-01       Impact factor: 4.458

2.  Plant paralog to viral movement protein that potentiates transport of mRNA into the phloem.

Authors:  B Xoconostle-Cázares; Y Xiang; R Ruiz-Medrano; H L Wang; J Monzer; B C Yoo; K C McFarland; V R Franceschi; W J Lucas
Journal:  Science       Date:  1999-01-01       Impact factor: 47.728

Review 3.  Protein targeting to subcellular organelles via MRNA localization.

Authors:  Benjamin L Weis; Enrico Schleiff; William Zerges
Journal:  Biochim Biophys Acta       Date:  2013-02

4.  RNA-Binding Protein RBP-P Is Required for Glutelin and Prolamine mRNA Localization in Rice Endosperm Cells.

Authors:  Li Tian; Hong-Li Chou; Laining Zhang; Seon-Kap Hwang; Shawn R Starkenburg; Kelly A Doroshenk; Toshihiro Kumamaru; Thomas W Okita
Journal:  Plant Cell       Date:  2018-09-06       Impact factor: 11.277

5.  A systemic small RNA signaling system in plants.

Authors:  Byung-Chun Yoo; Friedrich Kragler; Erika Varkonyi-Gasic; Valerie Haywood; Sarah Archer-Evans; Young Moo Lee; Tony J Lough; William J Lucas
Journal:  Plant Cell       Date:  2004-07-16       Impact factor: 11.277

Review 6.  Advances in fluorescence labeling strategies for dynamic cellular imaging.

Authors:  Kevin M Dean; Amy E Palmer
Journal:  Nat Chem Biol       Date:  2014-07       Impact factor: 15.040

7.  The role of localization of bicoid RNA in organizing the anterior pattern of the Drosophila embryo.

Authors:  T Berleth; M Burri; G Thoma; D Bopp; S Richstein; G Frigerio; M Noll; C Nüsslein-Volhard
Journal:  EMBO J       Date:  1988-06       Impact factor: 11.598

8.  Hierarchical regulation of mRNA partitioning between the cytoplasm and the endoplasmic reticulum of mammalian cells.

Authors:  Qiang Chen; Sujatha Jagannathan; David W Reid; Tianli Zheng; Christopher V Nicchitta
Journal:  Mol Biol Cell       Date:  2011-05-25       Impact factor: 4.138

Review 9.  Current techniques for visualizing RNA in cells.

Authors:  Lilith V J C Mannack; Sebastian Eising; Andrea Rentmeister
Journal:  F1000Res       Date:  2016-04-28

Review 10.  mRNA localization in metazoans: A structural perspective.

Authors:  Daniela Lazzaretti; Fulvia Bono
Journal:  RNA Biol       Date:  2017-07-31       Impact factor: 4.652
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  10 in total

Review 1.  The functional organization of axonal mRNA transport and translation.

Authors:  Irene Dalla Costa; Courtney N Buchanan; Matthew D Zdradzinski; Pabitra K Sahoo; Terika P Smith; Elizabeth Thames; Amar N Kar; Jeffery L Twiss
Journal:  Nat Rev Neurosci       Date:  2020-12-07       Impact factor: 34.870

2.  The Dynamic Kaleidoscope of RNA Biology in Plants.

Authors:  Julia Bailey-Serres; Jixian Zhai; Motoaki Seki
Journal:  Plant Physiol       Date:  2020-01       Impact factor: 8.340

3.  Zipcode RNA-Binding Proteins and Membrane Trafficking Proteins Cooperate to Transport Glutelin mRNAs in Rice Endosperm.

Authors:  Li Tian; Kelly A Doroshenk; Laining Zhang; Masako Fukuda; Haruhiko Washida; Toshihiro Kumamaru; Thomas Okita
Journal:  Plant Cell       Date:  2020-05-29       Impact factor: 11.277

4.  In Vivo Visualization of Mobile mRNA Particles in Plants Using BglG.

Authors:  Eduardo J Peña; Manfred Heinlein
Journal:  Methods Mol Biol       Date:  2022

5.  mRNALoc: a novel machine-learning based in-silico tool to predict mRNA subcellular localization.

Authors:  Anjali Garg; Neelja Singhal; Ravindra Kumar; Manish Kumar
Journal:  Nucleic Acids Res       Date:  2020-07-02       Impact factor: 16.971

6.  Arabidopsis Voltage-Dependent Anion Channels (VDACs): Overlapping and Specific Functions in Mitochondria.

Authors:  Mickaële Hemono; Élodie Ubrig; Kevin Azeredo; Thalia Salinas-Giegé; Laurence Drouard; Anne-Marie Duchêne
Journal:  Cells       Date:  2020-04-21       Impact factor: 6.600

Review 7.  The Landscape of RNA-Protein Interactions in Plants: Approaches and Current Status.

Authors:  Vesper Burjoski; Anireddy S N Reddy
Journal:  Int J Mol Sci       Date:  2021-03-11       Impact factor: 5.923

8.  Combining transcriptome analysis and GWAS for identification and validation of marker genes in the Physalis peruviana-Fusarium oxysporum pathosystem.

Authors:  Gina A Garzón-Martínez; Francy L García-Arias; Felix E Enciso-Rodríguez; Mauricio Soto-Suárez; Carolina González; Aureliano Bombarely; Luz Stella Barrero; Jaime A Osorio Guarín
Journal:  PeerJ       Date:  2021-03-22       Impact factor: 2.984

9.  mLoc-mRNA: predicting multiple sub-cellular localization of mRNAs using random forest algorithm coupled with feature selection via elastic net.

Authors:  Prabina Kumar Meher; Anil Rai; Atmakuri Ramakrishna Rao
Journal:  BMC Bioinformatics       Date:  2021-06-24       Impact factor: 3.169

10.  A co-fractionation mass spectrometry-based prediction of protein complex assemblies in the developing rice aleurone-subaleurone.

Authors:  Youngwoo Lee; Thomas W Okita; Daniel B Szymanski
Journal:  Plant Cell       Date:  2021-09-24       Impact factor: 11.277
  10 in total

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