Literature DB >> 31609197

ICTV Virus Taxonomy Profile: Paramyxoviridae.

Bert Rima1, Anne Balkema-Buschmann2, William G Dundon3, Paul Duprex4, Andrew Easton5, Ron Fouchier6, Gael Kurath7, Robert Lamb8, Benhur Lee9, Paul Rota10, Linfa Wang11.   

Abstract

The family Paramyxoviridae consists of large enveloped RNA viruses infecting mammals, birds, reptiles and fish. Many paramyxoviruses are host-specific and several, such as measles virus, mumps virus, Nipah virus, Hendra virus and several parainfluenza viruses, are pathogenic for humans. The transmission of paramyxoviruses is horizontal, mainly through airborne routes; no vectors are known. This is a summary of the current International Committee on Taxonomy of Viruses (ICTV) Report on the family Paramyxoviridae. which is available at ictv.global/report/paramyxoviridae.

Entities:  

Keywords:  ICTV Report; Paramyxoviridae; Taxonomy

Mesh:

Year:  2019        PMID: 31609197      PMCID: PMC7273325          DOI: 10.1099/jgv.0.001328

Source DB:  PubMed          Journal:  J Gen Virol        ISSN: 0022-1317            Impact factor:   3.891


Virion

Virions are enveloped, pleomorphic, but probably mostly spherical (Table 1, Fig. 1), with a ribonucleoprotein (RNP) core containing the RNA genome protected by a helical nucleocapsid protein (N), the polymerase-associated protein (P) and the large protein (L, including RNA-directed RNA polymerase, capping and cap methylation activities). The envelope contains two glycoproteins with receptor attachment [receptor-binding protein (RBP), designated variably as haemagglutinin–neuraminidase protein (HN), haemagglutinin (H) or glycoprotein (G)] and fusion (F) functions.
Table 1.

Characteristics of members of the family Paramyxoviridae

Typical member:

measles virus, Ichinose-B95a (AB016162), species Measles morbillivirus, genus Morbillivirus

Virion

Enveloped, pleomorphic (mostly spherical) virions with a diameter of 300–500 nm enclosing a ribonucleoprotein

Genome

Negative-sense, non-segmented RNA genomes of 14.6 to 20.1 kb

Replication

Cytoplasmic; the virus ribonucleoprotein complex replicates the antigenome and transcribes 6–8 positive-sense mRNAs

Translation

Cytoplasmic, by cellular machinery from capped and poly-adenylated mRNAs

Host range

Mammals, birds, fish and reptiles

 Taxonomy

Realm Riboviria, phylum Negarnaviricota, class Monjiviricetes, order Mononegavirales. Several subfamilies, numerous genera and >70 species

Fig. 1.

Paramyxovirus virion structure. (a) Negative-contrast electron micrograph of intact measles virus particle (genus Morbillivirus). Bar: 100 nm. (b) Schematic diagram of paramyxovirus particle in cross-section.

Characteristics of members of the family Paramyxoviridae Typical member: measles virus, Ichinose-B95a (AB016162), species Measles morbillivirus, genus Morbillivirus Virion Enveloped, pleomorphic (mostly spherical) virions with a diameter of 300–500 nm enclosing a ribonucleoprotein Genome Negative-sense, non-segmented RNA genomes of 14.6 to 20.1 kb Replication Cytoplasmic; the virus ribonucleoprotein complex replicates the antigenome and transcribes 6–8 positive-sense mRNAs Translation Cytoplasmic, by cellular machinery from capped and poly-adenylated mRNAs Host range Mammals, birds, fish and reptiles Taxonomy Realm Riboviria, phylum Negarnaviricota, class Monjiviricetes, order Mononegavirales. Several subfamilies, numerous genera and >70 species Paramyxovirus virion structure. (a) Negative-contrast electron micrograph of intact measles virus particle (genus Morbillivirus). Bar: 100 nm. (b) Schematic diagram of paramyxovirus particle in cross-section.

Genome

Virus genomes range from 14 296–20 148 nt, but all have a canonical gene arrangement of: 3′-N-P/V/C-M-F-RBP-L-5′ (Fig. 2). In some members this is interspersed with additional transcription units (ATUs).
Fig. 2.

Paramyxovirus genome structure (not to scale). Open reading frames (ORFs) are labelled as in Figure 1. Non-coloured regions represent untranslated regions in the mRNAs.

Paramyxovirus genome structure (not to scale). Open reading frames (ORFs) are labelled as in Figure 1. Non-coloured regions represent untranslated regions in the mRNAs.

Replication

Transcription of the negative-sense genome occurs in the cytoplasm and starts with the binding of the P/L protein complex to the transcription promoter at the 3′-end of the RNA, and transcription of 6–8 mRNAs that are capped and poly-adenylated. N-co-terminal V and P proteins encoded by alternative reading frames in the second transcribed gene are accessed by co-transcriptional insertion of non-templated G residues. The C protein is encoded in an overlapping reading frame in the V/P mRNA of most paramyxoviruses, with the exception of members of the subfamilies Avulavirinae, Rubulavirinae, Metaparamyxovirinae and the genus Ferlavirus. During replication, the negative-sense ribonucleoprotein (RNP) template is copied into a full-length encapsidated positive-sense RNA. Negative-sense RNPs are transported to the cellular surface, where budding occurs through interaction of the matrix (or membrane, M) protein with the RNP and the cytoplasmic tails of the two glycoproteins: the fusion protein (F) and the attachment protein (RBP).

Taxonomy

Subfamilies are defined by phylogenetic analysis of the L protein [1, 2], and are consistent with previous classifications based on host range, biological or biochemical criteria [3-5].

Avulavirinae

Members of the genera Orthoavulavirus, Metaavulavirus and Paraavulavirus infect birds. Their RBP has haemagglutinin and neuraminidase activity. Their genomes lack ATUs.

Rubulavirinae

Many members of the genera Orthoarubulavirus and Pararubulavirus derive from bats. Important human viruses are mumps virus and the respiratory viruses human parainfluenzavirus 2 and 4. The RBP of orthorubulaviruses has both haemagglutinin and neuraminidase activity. Pararubulavirus RBPs probably lack neuraminidase activity and may use a receptor other than sialic acid. Mumps virus and parainfluenza virus 5 have an ATU encoding an SH protein between the F and RBP genes.

Orthoparamyxovirinae

Members of the genera Respirovirus, Aquaparamyxovirus, Henipavirus, Narmovirus, Morbillivirus and Salemvirus lack ATUs. Members of the genus Ferlavirus have an additional ATU (U) between the N and P genes encoding a protein with unknown function. Members of Jeilongvirus have one or two ATUs (encoding SH and/or tM proteins) between the F and RBP genes. Members of the genera Respirovirus, Aquaparamyxovirus, Ferlavirus and possibly Jeilongvirus have a RBP that possesses haemagglutinin and neuraminidase activities. Members of the genera Henipavirus and Morbillivirus (and probably Narmovirus and Salemvirus) have protein receptors.

Metaparamyxovirinae

The species Synodus synodonvirus has been established based on two sequences found in a triplecross lizardfish. The RBP of Wēnlǐng triplecross lizardfish paramyxovirus probably interacts with a protein receptor.

Resources

Current ICTV Report on the family Paramyxoviridae: ictv.global/report/paramxyoviridae.
  4 in total

1.  Consensus statement: Virus taxonomy in the age of metagenomics.

Authors:  Peter Simmonds; Mike J Adams; Mária Benkő; Mya Breitbart; J Rodney Brister; Eric B Carstens; Andrew J Davison; Eric Delwart; Alexander E Gorbalenya; Balázs Harrach; Roger Hull; Andrew M Q King; Eugene V Koonin; Mart Krupovic; Jens H Kuhn; Elliot J Lefkowitz; Max L Nibert; Richard Orton; Marilyn J Roossinck; Sead Sabanadzovic; Matthew B Sullivan; Curtis A Suttle; Robert B Tesh; René A van der Vlugt; Arvind Varsani; F Murilo Zerbini
Journal:  Nat Rev Microbiol       Date:  2017-01-03       Impact factor: 60.633

Review 2.  Zoonotic Potential of Emerging Paramyxoviruses: Knowns and Unknowns.

Authors:  Patricia A Thibault; Ruth E Watkinson; Andres Moreira-Soto; Jan F Drexler; Benhur Lee
Journal:  Adv Virus Res       Date:  2017-02-02       Impact factor: 9.937

3.  Problems of classification in the family Paramyxoviridae.

Authors:  Bert Rima; Peter Collins; Andrew Easton; Ron Fouchier; Gael Kurath; Robert A Lamb; Benhur Lee; Andrea Maisner; Paul Rota; Lin-Fa Wang
Journal:  Arch Virol       Date:  2018-01-25       Impact factor: 2.574

4.  Origins and Evolution of the Global RNA Virome.

Authors:  Yuri I Wolf; Darius Kazlauskas; Jaime Iranzo; Adriana Lucía-Sanz; Jens H Kuhn; Mart Krupovic; Valerian V Dolja; Eugene V Koonin
Journal:  mBio       Date:  2018-11-27       Impact factor: 7.867

  4 in total
  61 in total

Review 1.  Receptor-mediated cell entry of paramyxoviruses: Mechanisms, and consequences for tropism and pathogenesis.

Authors:  Chanakha K Navaratnarajah; Alex R Generous; Iris Yousaf; Roberto Cattaneo
Journal:  J Biol Chem       Date:  2020-01-16       Impact factor: 5.157

Review 2.  Prospecting Human Milk Oligosaccharides as a Defense Against Viral Infections.

Authors:  Rebecca E Moore; Lianyan L Xu; Steven D Townsend
Journal:  ACS Infect Dis       Date:  2021-01-20       Impact factor: 5.084

3.  Single-virus assay reveals membrane determinants and mechanistic features of Sendai virus binding.

Authors:  Amy Lam; Orville O Kirkland; Papa Freduah Anderson; Nandini Seetharaman; Dragan Vujovic; Patricia A Thibault; Kristopher D Azarm; Benhur Lee; Robert J Rawle
Journal:  Biophys J       Date:  2022-02-09       Impact factor: 4.033

4.  Epidemiological surveillance of Newcastle disease virus in Egypt - a 6-year cohort study.

Authors:  Khaled G A Abozaid; Ahmed S Abdel-Moneim
Journal:  Trop Anim Health Prod       Date:  2022-08-01       Impact factor: 1.893

5.  Nucleolar Protein Treacle Is Important for the Efficient Growth of Mumps Virus.

Authors:  Aika Wakata; Hiroshi Katoh; Fumihiro Kato; Makoto Takeda
Journal:  J Virol       Date:  2022-09-22       Impact factor: 6.549

6.  Clustered Lysine Residues of the Canine Distemper Virus Matrix Protein Regulate Membrane Association and Budding Activity.

Authors:  Nicole P Kadzioch; Matthieu Gast; Francesco Origgi; Philippe Plattet
Journal:  J Virol       Date:  2020-12-09       Impact factor: 5.103

Review 7.  A review of mechanistic models of viral dynamics in bat reservoirs for zoonotic disease.

Authors:  Anecia D Gentles; Sarah Guth; Carly Rozins; Cara E Brook
Journal:  Pathog Glob Health       Date:  2020-11-13       Impact factor: 2.894

8.  Genome Sequence of Ruloma Virus, a Novel Paramyxovirus Clustering Basally to Members of the Genus Jeilongvirus.

Authors:  Bert Vanmechelen; Sien Meurs; Zafeiro Zisi; Joëlle Goüy de Bellocq; Magda Bletsa; Philippe Lemey; Piet Maes
Journal:  Microbiol Resour Announc       Date:  2021-05-06

9.  Screening of Eurasian Tundra Reindeer for Viral Sequences by Next-Generation Sequencing.

Authors:  Javier Sánchez Romano; Anna Omazic; Mikael Leijon; Åsa Hagström; Morten Tryland; Juha Kantanen; Tiina Reilas; Ulrika Rockström; Valery Fedorov; Ann Albihn
Journal:  Int J Environ Res Public Health       Date:  2021-06-18       Impact factor: 3.390

Review 10.  Bacterial and Viral Coinfections with the Human Respiratory Syncytial Virus.

Authors:  Gaspar A Pacheco; Nicolás M S Gálvez; Jorge A Soto; Catalina A Andrade; Alexis M Kalergis
Journal:  Microorganisms       Date:  2021-06-13
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