Literature DB >> 31585877

Reporting on the future of integrative structural biology ORAU workshop.

George L Hamilton1, Joshua Alper2, Hugo Sanabria3.   

Abstract

Integrative and hybrid methods have the potential to bridge long-standing knowledge gaps in structural biology. These methods will have a prominent role in the future of the field as we make advances toward a complete, unified representation of biology that spans the molecular and cellular scales. The Department of Physics and Astronomy at Clemson University hosted The Future of Integrative Structural Biology workshop on April 29, 2017 and partially sponsored by partially sponsored by a program of the Oak Ridge Associated Universities (ORAU). The workshop brought experts from multiple structural biology disciplines together to discuss near-term steps toward the goal of a molecular atlas of the cell. The discussion focused on the types of structural data that should be represented, how this data should be represented, and how the time domain might be incorporated into such an atlas. The consensus was that an explorable, map-like Virtual Cell, containing both spatial and temporal data bridging the atomic and cellular length scales obtained by multiple experimental methods, represents the best path toward a complete atlas of the cell.

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Year:  2020        PMID: 31585877      PMCID: PMC7323472          DOI: 10.2741/4794

Source DB:  PubMed          Journal:  Front Biosci (Landmark Ed)        ISSN: 2768-6698


  92 in total

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Authors:  Kazuo Kuwata
Journal:  Magn Reson Med Sci       Date:  2002       Impact factor: 2.471

Review 2.  Exploring the structure and function paradigm.

Authors:  Oliver C Redfern; Benoit Dessailly; Christine A Orengo
Journal:  Curr Opin Struct Biol       Date:  2008-06       Impact factor: 6.809

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4.  Combining experimental and simulation data of molecular processes via augmented Markov models.

Authors:  Simon Olsson; Hao Wu; Fabian Paul; Cecilia Clementi; Frank Noé
Journal:  Proc Natl Acad Sci U S A       Date:  2017-07-17       Impact factor: 11.205

5.  SCOP: a structural classification of proteins database for the investigation of sequences and structures.

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Journal:  J Mol Biol       Date:  1995-04-07       Impact factor: 5.469

6.  Breaking Cryo-EM Resolution Barriers to Facilitate Drug Discovery.

Authors:  Alan Merk; Alberto Bartesaghi; Soojay Banerjee; Veronica Falconieri; Prashant Rao; Mindy I Davis; Rajan Pragani; Matthew B Boxer; Lesley A Earl; Jacqueline L S Milne; Sriram Subramaniam
Journal:  Cell       Date:  2016-05-26       Impact factor: 41.582

7.  Data management in the modern structural biology and biomedical research environment.

Authors:  Matthew D Zimmerman; Marek Grabowski; Marcin J Domagalski; Elizabeth M Maclean; Maksymilian Chruszcz; Wladek Minor
Journal:  Methods Mol Biol       Date:  2014

8.  Filtered FCS: species auto- and cross-correlation functions highlight binding and dynamics in biomolecules.

Authors:  Suren Felekyan; Stanislav Kalinin; Hugo Sanabria; Alessandro Valeri; Claus A M Seidel
Journal:  Chemphyschem       Date:  2012-03-07       Impact factor: 3.102

9.  Breaking the diffraction barrier using fluorescence emission difference microscopy.

Authors:  Cuifang Kuang; Shuai Li; Wei Liu; Xiang Hao; Zhaotai Gu; Yifan Wang; Jianhong Ge; Haifeng Li; Xu Liu
Journal:  Sci Rep       Date:  2013       Impact factor: 4.379

10.  A standardized kinesin nomenclature.

Authors:  Carolyn J Lawrence; R Kelly Dawe; Karen R Christie; Don W Cleveland; Scott C Dawson; Sharyn A Endow; Lawrence S B Goldstein; Holly V Goodson; Nobutaka Hirokawa; Jonathon Howard; Russell L Malmberg; J Richard McIntosh; Harukata Miki; Timothy J Mitchison; Yasushi Okada; Anireddy S N Reddy; William M Saxton; Manfred Schliwa; Jonathan M Scholey; Ronald D Vale; Claire E Walczak; Linda Wordeman
Journal:  J Cell Biol       Date:  2004-10-11       Impact factor: 10.539

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  1 in total

1.  Out-of-Equilibrium Biophysical Chemistry: The Case for Multidimensional, Integrated Single-Molecule Approaches.

Authors:  Narendar Kolimi; Ashok Pabbathi; Nabanita Saikia; Feng Ding; Hugo Sanabria; Joshua Alper
Journal:  J Phys Chem B       Date:  2021-09-10       Impact factor: 3.466

  1 in total

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