Literature DB >> 31580674

Unbiased Determination of Absolute Configurations by vis-à-vis Comparison of Experimental and Simulated Spectra: The Challenging Case of Diplopyrone.

Marco Fusè1, Giuseppe Mazzeo2, Giovanna Longhi2,3, Sergio Abbate2,3, Marco Masi4, Antonio Evidente4, Cristina Puzzarini5, Vincenzo Barone1.   

Abstract

A new experimental-computational strategy for the determination of the absolute configuration (AC) of complex chiral molecules is proposed by combining diverse experimental spectroscopies with quantum-mechanical simulations well beyond the current computational practice. Key features are the conformer search and relative stability evaluation performed by a new stochastic two-level tool followed by a vis-à-vis comparison of experimental and computed spectra without any ad hoc adjustment. The entire computational procedure is embedded in the user-friendly VMS software, and its reliability is granted by the inclusion of mechanic/electric/magnetic anharmonicity as well as ro-vibrational and vibronic couplings by means of generalized perturbation theory in conjunction with double-hybrid functionals combined with empirical dispersion contributions and suitable basis sets. To test and validate the new approach, the puzzling case of diplopyrone, a fungal phytotoxic metabolite, has been chosen: the close match between new experimental and simulated infrared absorption and vibrational circular dichroism spectra has led to the unbiased evaluation of its AC.

Entities:  

Year:  2019        PMID: 31580674     DOI: 10.1021/acs.jpcb.9b08375

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  8 in total

1.  Two new ɑ-pyrone derivatives from the endophytic Diaporthe sp. ECN371.

Authors:  Ken-Ichi Nakashima; Yuka Higuchi; Junko Tomida; Yoshiaki Kawamura; Makoto Inoue
Journal:  J Nat Med       Date:  2022-01-04       Impact factor: 2.343

2.  Synthesis and crystal structure of (2S,4aR,8aR)-6-oxo-2,4a,6,8a-tetra-hydro-pyrano[3,2-b]pyran-2-carboxamide.

Authors:  John Greene; Noa Kopplin; Jack Roireau; Mark Bezpalko; Scott Kassel; Michael W Giuliano; Robert Giuliano
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2020-04-30

Review 3.  Phytotoxic Secondary Metabolites from Fungi.

Authors:  Dan Xu; Mengyao Xue; Zhen Shen; Xiaowei Jia; Xuwen Hou; Daowan Lai; Ligang Zhou
Journal:  Toxins (Basel)       Date:  2021-04-06       Impact factor: 4.546

4.  4-Fluoro-Threonine: From Diastereoselective Synthesis to pH-Dependent Conformational Equilibrium in Aqueous Solution.

Authors:  Simone Potenti; Lorenzo Spada; Marco Fusè; Giordano Mancini; Andrea Gualandi; Costanza Leonardi; Pier Giorgio Cozzi; Cristina Puzzarini; Vincenzo Barone
Journal:  ACS Omega       Date:  2021-05-14

5.  Anharmonic Aspects in Vibrational Circular Dichroism Spectra from 900 to 9000 cm-1 for Methyloxirane and Methylthiirane.

Authors:  Marco Fusè; Giovanna Longhi; Giuseppe Mazzeo; Stefano Stranges; Francesca Leonelli; Giorgia Aquila; Enrico Bodo; Bruno Brunetti; Carlo Bicchi; Cecilia Cagliero; Julien Bloino; Sergio Abbate
Journal:  J Phys Chem A       Date:  2022-09-20       Impact factor: 2.944

6.  CPL Spectra of Camphor Derivatives in Solution by an Integrated QM/MD Approach.

Authors:  Sara Del Galdo; Marco Fusè; Vincenzo Barone
Journal:  Front Chem       Date:  2020-07-07       Impact factor: 5.221

7.  Anti-Biofilm Activity of the Fungal Phytotoxin Sphaeropsidin A Against Clinical Isolates of Antibiotic-Resistant Bacteria.

Authors:  Emanuela Roscetto; Marco Masi; Matilde Esposito; Roberta Di Lecce; Antonella Delicato; Lucia Maddau; Viola Calabrò; Antonio Evidente; Maria Rosaria Catania
Journal:  Toxins (Basel)       Date:  2020-07-08       Impact factor: 4.546

8.  The Assignment of the Absolute Configuration of Non-Cyclic Sesquiterpenes by Vibrational and Electronic Circular Dichroism: The Example of Chiliadenus lopadusanus Metabolites.

Authors:  Giuseppe Mazzeo; Alessio Cimmino; Giovanna Longhi; Marco Masi; Antonio Evidente; Sergio Abbate
Journal:  Biomolecules       Date:  2021-12-18
  8 in total

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