| Literature DB >> 31575042 |
Miaomiao Xin1,2, Pavlina Vechtova3,4, Anna Shaliutina-Kolesova5, Zoltan Fussy6, Dmitry Loginov7,8, Borys Dzyuba9, Otomar Linhart10, Serhii Boryshpolets11, Marek Rodina12, Ping Li13,14, Yana Loginova15, Jan Sterba16,17.
Abstract
Transferrins are a superfamily of iron-binding proteins and are recognized as multifunctional proteins. In the present study, transcriptomic and proteomic methods were used to identify transferrins in the reproductive organs and sperm of out-of-spawning and spermiating sterlet (Acipenser ruthenus) males. The results showed that seven transferrin transcripts were identified in the transcriptome of sterlet, and these transcripts were qualified as two different transferrin genes, serotransferrin and melanotransferrin, with several isoforms present for serotransferrin. The relative abundance of serotransferrin isoforms was higher in the kidneys and Wolffian ducts in the spermiating males compared to out-of-spawning males. In addition, transferrin was immunodetected in sterlet seminal plasma, but not in sterlet spermatozoa extract. Mass spectrometry identification of transferrin in seminal plasma but not in spermatozoa corroborates immunodetection. The identification of transferrin in the reproductive organs and seminal plasma of sterlet in this study provides the potential function of transferrin during sturgeon male reproduction.Entities:
Keywords: Wolffian duct; kidney; sperm; testes; transcriptome
Year: 2019 PMID: 31575042 PMCID: PMC6826671 DOI: 10.3390/ani9100753
Source DB: PubMed Journal: Animals (Basel) ISSN: 2076-2615 Impact factor: 2.752
Figure 1Sample correlation matrix heatmap, showing the degree of similarity of differentially expressed transcript clusters between each sample. SM: spermiating; OOS: out-of-spawning; K: kidney; WD: Wolffian duct; T: testes.
List of identified genes and their isoforms in the sterlet together with their NCBI accession numbers. * incomplete ORFs.
| Transcript Name | NCBI Accession Number | Length (nt) | ORF |
|---|---|---|---|
| Serotransferrin isoform 1 | MN045270 | 465 | 1–465 * |
| Serotransferrin isoform 2 | MN045271 | 1790 | 285–1790 * |
| Serotransferrin isoform 3 | MN045272 | 2651 | 285–1907 |
| Serotransferrin isoform 4 | MN045273 | 1212 | 187–1212 * |
| Serotransferrin isoform 5 | MN045274 | 425 | 1–425 * |
| Serotransferrin isoform 6 | MN045275 | 1310 | 285–1310 * |
| Melanotransferrin isoform 1 | MN045278 | 4514 | 263–2467 |
Figure 2Phylogram showing the relationship of putative A. ruthenus transferrin isoforms with other transferrin sequences of related fish species and selected tetrapods. Panel A, melanotransferrin; panel B, serotransferrin. The ML phylogram was inferred by IQ-TREE with the guide/final tree inference (PMSF) strategy (see Material and Methods). The tree was rooted using sequences from Callorhinchus milii (Chondrichthyes, Chimaeriformes).
Figure 3Relative abundances (TPM) of serotransferrin (A) and melanotransferrin (B) transcripts in the individual organs of both the mature and out-of-spawning sterlet males. (A) also shows the ratio of individual serotransferrin isoforms in each sample. SM: spermiating; OOS: out-of-spawning; K: kidney; WD: Wolffian duct; T: testes.
Relative abundances (TPM) of the sterlet serotransferrin and melanotransferrin isoforms in the studies samples.
| Serotransferrin | Melanotransferrin | ||||||
|---|---|---|---|---|---|---|---|
| Isoforms | 1 | 2 | 3 | 4 | 5 | 6 | 1 |
| SM T | 0.92 | 0.23 | 0.44 | 0.36 | 0.33 | 0.66 | 0.48 |
| OOS T | 0.68 | 0.12 | 0.32 | 0.69 | 0.08 | 0.16 | 1.07 |
| SM K | 207.37 | 3.66 | 94.61 | 22.17 | 7.34 | 205.45 | 0.07 |
| OOS K | 55.46 | 13.02 | 31.93 | 46.99 | 23.07 | 17.46 | 0.09 |
| SM WD | 11.17 | 0.01 | 5.31 | 6.54 | 0.09 | 5.57 | 0.24 |
| OOS WD | 4.09 | 0.24 | 1.85 | 3.61 | 0.54 | 1.13 | 0.73 |
SM: spermiating; OOS: out-of-spawning; K: kidney; WD: Wolffian duct; T: testes.
Figure 4Representative sterlet seminal plasma protein profile (A) visualized by two-dimensional gel electrophoresis. Immunoblot of sterlet seminal plasma with specific antibodies (B). Circles show the identified protein spots, two of which were reactive and subjected to MALDI-TOF/TOF MS. Molecular weight marker is on the right. pI = Isoelectric points.
Figure 5Representative spermatozoa protein profiles (A) of sterlet by two-dimensional gel electrophoresis. Western blot reaction of sterlet spermatozoa (B). Circles show the reacted protein spots subjected to MALDI-TOF/TOF MS. Molecular weight marker is on the right. pI = Isoelectric points.
List of proteins identified in the seminal plasma of sterlet (Acipenser ruthenus).
| Spot No. | Accession No. (a) | Description (b) | Organism | MW, kDa/pI (c) | Score (d) | No. of Peptides (e) | SC, % (f) |
|---|---|---|---|---|---|---|---|
| 1 | MN045272 | serotransferrin isoform 3 |
| 58.50/6.78 | 482.87 | 11 | 24.80 |
| MN045273 | serotransferrin isoform 4 |
| 37.40/6.79 | 367.31 | 9 | 25.70 | |
| 8 | gi|966652723 | hypothetical protein cypCar_00035444 |
| 26.50/5.13 | 113.60 | 2 | 8.70 |
(a) This accession number refers to the sequence retrieved from the NCBInr protein database. (b) A description of the respective protein accession. Protein homologs were assigned to unknown proteins via BLAST search. (c) A theoretical molecular weight and pI values. (d) The probability-based score value resulting from the MS/MS search. (e) Number of identified peptides. (f) Sequence coverage (SC) calculated from the peptide MS/MS data.
List of proteins identified in the spermatozoa of sterlet (Acipenser ruthenus).
| Spot No. | Accession No. (a) | Description (b) | Organism | MW, kDa/pI (c) | Score (d) | No. of Peptides (e) | SC, % (f) |
|---|---|---|---|---|---|---|---|
| 1 | gi|1025390473 | PREDICTED: beta-enolase |
| 47.40/6.58 | 513.09 | 10 | 24.90 |
| gi|966672540 | hypothetical protein cypCar_00005974, partial |
| 47.30/4.81 | 338.33 | 5 | 18.20 | |
| 2 | gi|1025390473 | PREDICTED: beta-enolase |
| 47.40/6.58 | 355.54 | 11 | 21.00 |
| gi|966672540 | hypothetical protein cypCar_00005974, partial |
| 47.30/4.81 | 321.81 | 6 | 14.30 | |
| 19 | gi|82414773 | UNVERIFIED_ORG: zgc:123298 |
| 49.90/5.01 | 847.58 | 13 | 35.80 |
| gi|45709036 | Tuba1 protein |
| 50.10/4.94 | 808.62 | 14 | 40.40 | |
| gi|47940377 | Zgc:55461 |
| 49.80/4.79 | 634.28 | 11 | 31.00 | |
| gi|468861133 | tubulin alpha 1-like protein 2 |
| 49.20/4.91 | 628.46 | 12 | 37.70 | |
| gi|295314924 | tubulin beta 1 |
| 49.70/4.79 | 613.81 | 11 | 27.60 | |
| gi|966714399 | hypothetical protein cypCar_00019490 |
| 49.80/5.05 | 555.40 | 9 | 25.40 | |
| 20 | gi|295314924 | tubulin beta 1 |
| 49.70/4.79 | 740.86 | 13 | 42.70 |
| gi|1025170763 | PREDICTED: tubulin beta chain-like |
| 49.60/4.81 | 658.89 | 10 | 35.10 | |
| gi|966703762 | hypothetical protein cypCar_00027299 |
| 50.40/4.72 | 582.05 | 9 | 32.30 | |
| gi|1101617233 | PREDICTED: tubulin beta chain-like isoform X1 |
| 55.90/5.33 | 553.66 | 9 | 26.30 | |
| 22 | gi|1101525613 | PREDICTED: tubulin beta-1 chain-like |
| 49.70/4.75 | 87.37 | 2 | 6.10 |
(a) This accession number refers to the sequence retrieved from the NCBInr protein database. (b) A description of the respective protein accession. Protein homologs were assigned to unknown proteins via BLAST search. (c) A theoretical molecular weight and pI values. (d) The probability-based score value resulting from the MS/MS search. (e) Number of identified peptides. (f) Sequence coverage (SC) calculated from the peptide MS/MS data.