| Literature DB >> 31570097 |
Fan Li1, Yun Wang1, Hui Yang1, Yingying Xu1, Xiaoyan Zhou1, Xiao Zhang1, Zhaohong Xie2, Jianzhong Bi3.
Abstract
BACKGROUND: The BACE1 antisense transcript (BACE1-AS) is a conserved long noncoding RNA (lncRNA). The level of BACE1-AS is significantly increased and the level of the BACE1 mRNA is slightly increased in subjects with AD. BACE1-AS exerts a significant moderating effect on the expression of the BACE1 mRNA and promotes the formation of Aβ. After the administration of Aβ1-42 to SH-SY5Y cells and C57/BL6J mice, we detected the expression of BACE1-AS, BACE1 mRNA, and BACE1 protein, as well as the concentration of Aβ1-40. Then, we silenced the expression of BACE1-AS in SH-SY5Y and 20E2 cells using siRNAs targeting BACE1-AS and detected its effects on the levels of the BACE1 mRNA and BACE1 protein and Aβ1-40 generation.Entities:
Keywords: Alzheimer’s disease; Aβ; BACE1-AS; lncRNA
Mesh:
Substances:
Year: 2019 PMID: 31570097 PMCID: PMC6771094 DOI: 10.1186/s12867-019-0140-0
Source DB: PubMed Journal: BMC Mol Biol ISSN: 1471-2199 Impact factor: 2.946
Fig. 1Exogenous Aβ1-42 promotes Aβ production by increasing BACE1-AS expression in SH-SY5Y cells. After treating SH-SY5Y cells with Aβ1-42, the expression of BACEl-AS and BACEl were significantly elevated (*P < 0.05). After the pretreatment with BACE1-AS siRNA for 24 h followed by treatment with Aβ1-42, the expression of BACEl-AS and BACE1 mRNA significantly decreased (*P < 0.05) (a). After treating SH-SY5Y cells with Aβ1-42 , the expression of BACEl and C1F protein (b, c), and also the concentration of Aβ1-40 (d) in extracellular fluid were significantly elevated (*P < 0.05). After the pretreatment with BACEl-AS siRNA for 24 h followed by treatment with Aβ1-42 for 2 h, the expression of BACEl and CTF protein (b, c), and also the concentration of Aβ1-40 (d) significantly decreased (*P < 0.05)
Oligonucleotide sequences used for Taqman PCR and siRNA sequences
| Primer name | Application | Sequence or assay ID |
|---|---|---|
| 1. Human BACE1-AS–F | Real-time PCR | GAAGGGTCTAAGTGCAGACATCTT |
| 2. Human BACE1-AS–R | Real-time PCR | AGGGAGGCGGTGAGAGT |
| 3. Human BACE1-AS–P | Real-time PCR | ACATTCTTCAGCAACAGCC |
| 4. Mouse BACE1-AS–F | Real-time PCR | GTAGGCAGGGAAGCTAGTACTGA |
| 5. Mouse BACE1-AS–R | Real-time PCR | AGAGGCTTGCAGTCCAGTTC |
| 6. Mouse BACE1-AS–P | Real-time PCR | CCTGGAAGGAGAAACAG |
| 7. Human BACE1–F | Real-time PCR | Taqman(Assay ID: Hs00201573_m1) |
| 8. Human BACE1–R | Real-time PCR | Taqman(Assay ID: Hs00201573_m1) |
| 9. Human BACE1–P | Real-time PCR | Taqman(Assay ID: Hs00201573_m1) |
| 10. Mouse BACE1–F | Real-time PCR | Taqman(Assay ID: Mm00478664_m1) |
| 11. Mouse BACE1–R | Real-time PCR | Taqman(Assay ID: Mm00478664_m1) |
| 12. Mouse BACE1–P | Real-time PCR | Taqman(Assay ID: Mm00478664_m1) |
| 13. Human BACE1-AS siRNA_a | siRNA | CCCTCTGACACTGTACCATCTCTTT |
| 14. Human BACE1-AS siRNA_b | siRNA | AGAAGGGTCTAAGTGCAGACATCTG |
| 15. Human BACE1-AS siRNA_c | siRNA | CCAGAAGAGAAAGGGCACT |
Fig. 2Exogenous Aβ1-42 induces BACE1-AS and BACE1 expression and Aβ generation in the brains of C57BL/6J mice. Three days after injection of Aβ1-42 into the CA1 region of left side hippocampus of the mouse using experimental group using stereotactic technique, the expression of BACEl-AS and BACEl mRNA increased in the hippocampus on the injected side (*P < 0. 05 vs. control group) (a), and the content of Aβ1-40 raised compared with the control group (*P < 0.05 vs. control group) (b)
Fig. 3Effect of BACE1-AS silencing with siRNAs on BACE1 expression and Aβ1-40 and Aβ1-42 production in 20E2 cells
Fig. 4Oligonucleotide sequences for human BACE1-AS [12]
Fig. 5Oligonucleotide sequences for mouse BACE1-AS [12]