Literature DB >> 31569147

Combining Biomarker Calibration Data to Reduce Measurement Error.

Neil J Perkins1, Jennifer Weck1, Sunni L Mumford1, Lindsey A Sjaarda1, Emily M Mitchell2, Anna Z Pollack3, Enrique F Schisterman1.   

Abstract

Biomarker assay measurement often consists of a two-stage process where laboratory equipment yields a relative measure which is subsequently transformed to the unit of interest using a calibration curve. The calibration curve establishes the relation between the measured relative units and sample biomarker concentrations using stepped samples of known biomarker concentrations. Samples from epidemiologic studies are often measured in multiple batches or plates, each with independent calibration experiments. Collapsing calibration information across batches before statistical analysis has been shown to reduce measurement error and improves estimation. Additionally, collapsing in practice can also create an additional layer of quality control (QC) and optimization in a part of the laboratory measurement process that is often highly automated. Principled recalibration is demonstrated via. a three-step process of identifying batches where recalibration might be beneficial, forming a collapsed calibration curve and recalibrating identified batches, and using QC data to assess the appropriateness of recalibration. Here, we use inhibin B measured in biospecimens from the BioCycle study using 50 enzyme-linked immunosorbent assay (ELISA) batches (3875 samples) to motivate and display the benefits of collapsing calibration experiments, such as detecting and overcoming faulty calibration experiments, and thus improving assay coefficients of variation from reducing unwanted measurement error variability. Differences in the analysis of inhibin B by testosterone quartile are also demonstrated before and after recalibration. These simple and practical procedures are minor adjustments implemented by study personnel without altering laboratory protocols which could have positive estimation and cost-saving implications especially for population-based studies.

Entities:  

Mesh:

Substances:

Year:  2019        PMID: 31569147      PMCID: PMC7968112          DOI: 10.1097/EDE.0000000000001094

Source DB:  PubMed          Journal:  Epidemiology        ISSN: 1044-3983            Impact factor:   4.822


  13 in total

1.  Testing for differentially-expressed genes by maximum-likelihood analysis of microarray data.

Authors:  T Ideker; V Thorsson; A F Siegel; L E Hood
Journal:  J Comput Biol       Date:  2000       Impact factor: 1.479

2.  Contamination of Environmental Samples Prepared for PCB Analysis.

Authors:  R E Alcock; C J Halsall; C A Harris; A E Johnston; W A Lead; G Sanders; K C Jones
Journal:  Environ Sci Technol       Date:  1994-10-01       Impact factor: 9.028

3.  Quality management science in clinical chemistry: a dynamic framework for continuous improvement of quality.

Authors:  J O Westgard; R W Burnett; G N Bowers
Journal:  Clin Chem       Date:  1990-10       Impact factor: 8.327

4.  Treatment of batch in the detection, calibration, and quantification of immunoassays in large-scale epidemiologic studies.

Authors:  Brian W Whitcomb; Neil J Perkins; Paul S Albert; Enrique F Schisterman
Journal:  Epidemiology       Date:  2010-07       Impact factor: 4.822

Review 5.  Human biomonitoring: state of the art.

Authors:  Jürgen Angerer; Ulrich Ewers; Michael Wilhelm
Journal:  Int J Hyg Environ Health       Date:  2007-03-21       Impact factor: 5.840

6.  A multi-rule Shewhart chart for quality control in clinical chemistry.

Authors:  J O Westgard; P L Barry; M R Hunt; T Groth
Journal:  Clin Chem       Date:  1981-03       Impact factor: 8.327

7.  A conditional likelihood approach for regression analysis using biomarkers measured with batch-specific error.

Authors:  Ming Wang; W Dana Flanders; Roberd M Bostick; Qi Long
Journal:  Stat Med       Date:  2012-07-24       Impact factor: 2.373

8.  Timing clinic visits to phases of the menstrual cycle by using a fertility monitor: the BioCycle Study.

Authors:  Penelope P Howards; Enrique F Schisterman; Jean Wactawski-Wende; Jennifer E Reschke; Andrea A Frazer; Kathleen M Hovey
Journal:  Am J Epidemiol       Date:  2008-10-30       Impact factor: 4.897

9.  BioCycle study: design of the longitudinal study of the oxidative stress and hormone variation during the menstrual cycle.

Authors:  Jean Wactawski-Wende; Enrique F Schisterman; Kathleen M Hovey; Penelope P Howards; Richard W Browne; Mary Hediger; Aiyi Liu; Maurizio Trevisan
Journal:  Paediatr Perinat Epidemiol       Date:  2009-03       Impact factor: 3.980

10.  A Method and On-Line Tool for Maximum Likelihood Calibration of Immunoblots and Other Measurements That Are Quantified in Batches.

Authors:  Steven S Andrews; Suzannah Rutherford
Journal:  PLoS One       Date:  2016-02-23       Impact factor: 3.240

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.