Literature DB >> 31551239

Distinct Elements Confer the Blocking and Bypass Functions of the Bithorax Fab-8 Boundary.

Olga Kyrchanova1, Daniel Wolle2, Marat Sabirov1, Amina Kurbidaeva2, Tsutomu Aoki2, Oksana Maksimenko1, Maria Kyrchanova1, Pavel Georgiev1, Paul Schedl2,3.   

Abstract

Boundaries in the Drosophila bithorax complex (BX-C) enable the regulatory domains that drive parasegment-specific expression of the three Hox genes to function autonomously. The four regulatory domains (iab-5, iab-6, iab-7, and iab-8) that control the expression of the Abdominal-B (Abd-B) gene are located downstream of the transcription unit, and are delimited by the Mcp, Fab-6, Fab-7, and Fab-8 boundaries. These boundaries function to block cross talk between neighboring regulatory domains. In addition, three of the boundaries (Fab-6, Fab-7, and Fab-8) must also have bypass activity so that regulatory domains distal to the boundaries can contact the Abd-B promoter. In the studies reported here, we have undertaken a functional dissection of the Fab-8 boundary using a boundary-replacement strategy. Our studies indicate that the Fab-8 boundary has two separable subelements. The distal subelement blocks cross talk, but cannot support bypass. The proximal subelement has only minimal blocking activity but is able to mediate bypass. A large multiprotein complex, the LBC (large boundary complex), binds to sequences in the proximal subelement and contributes to its bypass activity. The same LBC complex has been implicated in the bypass activity of the Fab-7 boundary.
Copyright © 2019 by the Genetics Society of America.

Entities:  

Keywords:  Abdominal-B; CTCF; Fab-7; Fab-8; LBC; bithorax; blocking; bypass; chromatin boundaries; insulators

Mesh:

Substances:

Year:  2019        PMID: 31551239      PMCID: PMC6827379          DOI: 10.1534/genetics.119.302694

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  66 in total

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4.  Loss of insulator activity by paired Su(Hw) chromatin insulators.

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5.  Developmental modulation of Fab-7 boundary function.

Authors:  Susan E Schweinsberg; Paul Schedl
Journal:  Development       Date:  2004-08-25       Impact factor: 6.868

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7.  The BEN Domain Protein Insensitive Binds to the Fab-7 Chromatin Boundary To Establish Proper Segmental Identity in Drosophila.

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Journal:  Genetics       Date:  2018-08-06       Impact factor: 4.562

8.  The bluetail transposon: evidence for independent cis-regulatory domains and domain boundaries in the bithorax complex.

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9.  Architecture of metaphase chromosomes and chromosome scaffolds.

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Journal:  Genetics       Date:  2016-12-22       Impact factor: 4.562

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5.  Mapping of functional elements of the Fab-6 boundary involved in the regulation of the Abd-B hox gene in Drosophila melanogaster.

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6.  The Functions and Mechanisms of Action of Insulators in the Genomes of Higher Eukaryotes.

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7.  Dimerization Activity of a Disordered N-Terminal Domain from Drosophila CLAMP Protein.

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