Literature DB >> 31549592

Bioinformatics Approaches for Anti-cancer Drug Discovery.

Kening Li1, Yuxin Du1, Lu Li2, Dong-Qing Wei1.   

Abstract

Drug discovery is important in cancer therapy and precision medicines. Traditional approaches of drug discovery are mainly based on in vivo animal experiments and in vitro drug screening, but these methods are usually expensive and laborious. In the last decade, omics data explosion provides an opportunity for computational prediction of anti-cancer drugs, improving the efficiency of drug discovery. High-throughput transcriptome data were widely used in biomarkers' identification and drug prediction by integrating with drug-response data. Moreover, biological network theory and methodology were also successfully applied to the anti-cancer drug discovery, such as studies based on protein-protein interaction network, drug-target network and disease-gene network. In this review, we summarized and discussed the bioinformatics approaches for predicting anti-cancer drugs and drug combinations based on the multi-omic data, including transcriptomics, toxicogenomics, functional genomics and biological network. We believe that the general overview of available databases and current computational methods will be helpful for the development of novel cancer therapy strategies. Copyright© Bentham Science Publishers; For any queries, please email at epub@benthamscience.net.

Keywords:  Drug discovery; bioinformatics; biomarkers; cancer therapy; multi-omic data; precision medicine.

Mesh:

Substances:

Year:  2020        PMID: 31549592     DOI: 10.2174/1389450120666190923162203

Source DB:  PubMed          Journal:  Curr Drug Targets        ISSN: 1389-4501            Impact factor:   3.465


  11 in total

Review 1.  In silico Methods for Identification of Potential Therapeutic Targets.

Authors:  Xuting Zhang; Fengxu Wu; Nan Yang; Xiaohui Zhan; Jianbo Liao; Shangkang Mai; Zunnan Huang
Journal:  Interdiscip Sci       Date:  2021-11-26       Impact factor: 3.492

2.  Identification of anticancer drug target genes using an outside competitive dynamics model on cancer signaling networks.

Authors:  Tien-Dzung Tran; Duc-Tinh Pham
Journal:  Sci Rep       Date:  2021-07-08       Impact factor: 4.379

3.  Prediction of Synergistic Drug Combinations for Prostate Cancer by Transcriptomic and Network Characteristics.

Authors:  Shiqi Li; Fuhui Zhang; Xiuchan Xiao; Yanzhi Guo; Zhining Wen; Menglong Li; Xuemei Pu
Journal:  Front Pharmacol       Date:  2021-04-12       Impact factor: 5.810

4.  Methyl Jasmonate Cytotoxicity and Chemosensitization of T Cell Lymphoma In Vitro Is Facilitated by HK 2, HIF-1α, and Hsp70: Implication of Altered Regulation of Cell Survival, pH Homeostasis, Mitochondrial Functions.

Authors:  Yugal Goel; Saveg Yadav; Shrish Kumar Pandey; Mithlesh Kumar Temre; Vinay Kumar Singh; Ajay Kumar; Sukh Mahendra Singh
Journal:  Front Pharmacol       Date:  2021-02-26       Impact factor: 5.810

5.  Drugging multiple same-allele driver mutations in cancer.

Authors:  Ruth Nussinov; Mingzhen Zhang; Ryan Maloney; Hyunbum Jang
Journal:  Expert Opin Drug Discov       Date:  2021-03-26       Impact factor: 7.050

6.  UHRF1 predicts poor prognosis by triggering cell cycle in lung adenocarcinoma.

Authors:  Zhenbo Tu; Xinzhou Deng; Shengqi Hou; Anlin Feng; Qiuping Zhang
Journal:  J Cell Mol Med       Date:  2020-06-03       Impact factor: 5.310

7.  Pharmacoinformatics and Preclinical Studies of NSC765690 and NSC765599, Potential STAT3/CDK2/4/6 Inhibitors with Antitumor Activities against NCI60 Human Tumor Cell Lines.

Authors:  Bashir Lawal; Yen-Lin Liu; Ntlotlang Mokgautsi; Harshita Khedkar; Maryam Rachmawati Sumitra; Alexander T H Wu; Hsu-Shan Huang
Journal:  Biomedicines       Date:  2021-01-19

8.  EF-Hand Domain-Containing Protein D2 (EFHD2) Correlates with Immune Infiltration and Predicts the Prognosis of Patients: A Pan-Cancer Analysis.

Authors:  Yu Wang; Meiqi Song; Binbin Gao
Journal:  Comput Math Methods Med       Date:  2022-03-15       Impact factor: 2.238

Review 9.  Emerging Promise of Computational Techniques in Anti-Cancer Research: At a Glance.

Authors:  Md Mominur Rahman; Md Rezaul Islam; Firoza Rahman; Md Saidur Rahaman; Md Shajib Khan; Sayedul Abrar; Tanmay Kumar Ray; Mohammad Borhan Uddin; Most Sumaiya Khatun Kali; Kamal Dua; Mohammad Amjad Kamal; Dinesh Kumar Chellappan
Journal:  Bioengineering (Basel)       Date:  2022-07-25

10.  Editorial: Tumor microenvironment in cancer hallmarks and therapeutics.

Authors:  Na Luo
Journal:  Front Mol Biosci       Date:  2022-09-12
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