| Literature DB >> 31547033 |
Fan Lu1,2, Zhaojun Bu3,4, Shan Lu5,6.
Abstract
As a primary pigment of leafy green vegetables, chlorophyll plays a major role in indicating vegetable growth status. The application of hyperspectral remote sensing reflectance offers a quick and nondestructive method to estimate the chlorophyll content of vegetables. Reflectance of adaxial and abaxial leaf surfaces from three common leafy green vegetables: Pakchoi var. Shanghai Qing (Brassica chinensis L. var. Shanghai Qing), Chinese white cabbage (Brassica campestris L. ssp. Chinensis Makino var. communis Tsen et Lee), and Romaine lettuce (Lactuca sativa var longifoliaf. Lam) were measured to estimate the leaf chlorophyll content. Modeling based on spectral indices and the partial least squares regression (PLS) was tested using the reflectance data from the two surfaces (adaxial and abaxial) of leaves in the datasets of each individual vegetable and the three vegetables combined. The PLS regression model showed the highest accuracy in estimating leaf chlorophyll content of pakchoi var. Shanghai Qing (R2 = 0.809, RMSE = 62.44 mg m-2), Chinese white cabbage (R2 = 0.891, RMSE = 45.18 mg m-2) and Romaine lettuce (R2 = 0.834, RMSE = 38.58 mg m-2) individually as well as of the three vegetables combined (R2 = 0.811, RMSE = 55.59 mg m-2). The good predictability of the PLS regression model is considered to be due to the contribution of more spectral bands applied in it than that in the spectral indices. In addition, both the uninformative variable elimination PLS (UVE-PLS) technique and the best performed spectral index: MDATT, showed that the red-edge region (680-750 nm) was effective in estimating the chlorophyll content of vegetables with reflectance from two leaf surfaces. The combination of the PLS regression model and the red-edge region are insensitive to the difference between the adaxial and abaxial leaf structure and can be used for estimating the chlorophyll content of leafy green vegetables accurately.Entities:
Keywords: adaxial and abaxial; chlorophyll; partial least squares (PLS); reflectance; vegetation index
Mesh:
Substances:
Year: 2019 PMID: 31547033 PMCID: PMC6806069 DOI: 10.3390/s19194059
Source DB: PubMed Journal: Sensors (Basel) ISSN: 1424-8220 Impact factor: 3.576
Chlorophyll content (mg m−2) of three species vegetables extracted in this study.
| Samples for Calibration | Total Chlorophyll Content | Samples for Validation | Total Chlorophyll Content | ||||
|---|---|---|---|---|---|---|---|
| Minimum | Median | Maximum | Minimum | Median | Maximum | ||
| pakchoi var.Shanghai Qing | 7.20 | 302.73 | 557.57 | pakchoi var.Shanghai Qing | 7.20 | 198.15 | 490.66 |
| Chinese white cabbage | 7.20 | 236.39 | 499.34 | Chinese white cabbage (n = 17) | 60.64 | 269.79 | 465.92 |
| Romaine lettuce | 76.06 | 276.70 | 446.18 | Romaine lettuce | 95.07 | 269.31 | 404.78 |
Figure 1The measuring positions of the leaves for each plant species: (a) Pakchoi var. Shanghai Qing, (b) Chinese white cabbage, (c) Romaine lettuce.
Previously published spectral indices used in this study.
| Spectral Index | References | Spectral Index | References |
|---|---|---|---|
| (R850 − R710)/(R850− R680) | Datt, 1999b | (R800 − R650)/(R800 + R650) | Blackburn, 1998b |
| D754/D704 | Takebe and Yoneyama, 1989 | PSNDb: | Blackburn, 1998a |
| NDI: | Gitelson and Merzlyak, 1994 | VOG2: | Vogelmann et al., 1993 |
| D730 | Richardson et al., 2002 | 1/R700−1/R750 | Gitelson et al., 2003 |
| R672/(R550*R708) | Datt, 1998 | R750/R700 | Lichtenthaler et al., 1996 |
| R860/(R550*R708) | Datt, 1998 | R750/R550 | Lichtenthaler et al., 1996 |
| 1/R700 | Gitelson and Merzlyak, 1996 | 1/R550−1/R750 | Gitelson et al., 2003 |
| R800/R675 | Blackburn, 1998b | R750/R710 | Zarco-Tejada et al., 2001 |
| R800/R650 | Blackburn, 1998b | R710/R760 | Carter, 1994 |
| PSSRb: B800/B635 | Blackburn, 1998a | R695/R420 | Carter, 1994 |
| PSSRa: R800/R680 | Blackburn, 1998a | R605/R760 | Carter, 1994 |
| R672/R550 | Datt, 1998 | R550 | Carter, 1994 |
| R860/R550 | Datt, 1998 | D715/D705 | Vogelman et al., 1993 |
| (R800 − R675)/(R800 + R675) | Blackburn, 1998b | D725/D702 | Kochubey and Kazantsev, 2007 |
| R680 | Blackburn, 1998b | R800−R550 | Buschman and Nagel, 1993 |
Figure 2The average reflectance (full line for adaxial and dashed line for abaxial) and standard deviation (shadow region) of the adaxial and abaxial leaf surfaces for each plant species: (a) Pakchoi var. Shanghai Qing; (b) Chinese white cabbage; (c) Romaine lettuce, and (d) for the three species combined.
Figure 3The absolute values of difference between the adaxial and abaxial leaf surfaces for each plant species.
Figure 4Comparison of the spectral indices and the PLS regression model for chlorophyll content estimation of (a) pakchoi var. Shanghai Qing, Modified Datt index (MDATT): (R710 − R727)/(R710 − R734); (b) Chinese white cabbage, MDATT: (R703 − R732)/(R703 − R722); (c) Romaine lettuce, MDATT: (R712 − R744)/(R712 − R720) and (d) the three species combined, MDATT: (R705 − R732)/(R705 − R722).
Calibration and validation statistics of the partial least squares (PLS) regression models on the entire measurement spectra (400–1000 nm) for determination of the leaf chlorophyll content in each vegetable.
| Vegetables | Calibration Dataset | Validation Dataset | |||||
|---|---|---|---|---|---|---|---|
| N | PCs | R2 | RMSE(mg m−2) | N | R2 | RMSE(mg m−2) | |
| pakchoi Var. Shanghai Qing | 90 | 7 | 0.880 | 52.28 | 42 | 0.809 | 62.44 |
| Chinese White Cabbage | 86 | 16 | 0.894 | 42.20 | 34 | 0.891 | 45.18 |
| Romaine Lettuce | 90 | 8 | 0.879 | 38.66 | 34 | 0.834 | 38.58 |
| All Combination | 266 | 16 | 0.846 | 51.77 | 110 | 0.811 | 55.59 |
PCs: Number of latent variables; N: Number of samples.
Validation statistics of spectral indices on the entire measuring spectra (400−1000 nm) for determination of the leaf chlorophyll content of each vegetable.
| Spectral Index | Validation for Pakchoi Var. Shanghai Qing | Spectral Index | Validation for Chinese White Cabbage | Spectral Index | Validation for Romaine Lettuce | Spectral Index | Validation for | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| R2 | RMSE | R2 | RMSE | R2 | RMSE | R2 | RMSE | ||||
| MDATT(R710 − R727)/(R710 − R734) | 0.790 | 65.41 | MDATT(R703 − R732)/(R703 − R722) | 0.850 | 52.89 | MDATT(R712 − R744)/(R712 − R720) | 0.736 | 48.54 | MDATT(R705 − R732)/(R705 − R722) | 0.800 | 58.81 |
| D715/D705 | 0.766 | 69.11 | D715/D705 | 0.832 | 55.91 | D725/D702 | 0.692 | 52.47 | D715/D705 | 0.777 | 64.01 |
| D725/D702 | 0.740 | 72.86 | D725/D702 | 0.796 | 61.64 | D715/D705 | 0.679 | 53.54 | D725/D702 | 0.751 | 67.57 |
| (R850 − R710)/(R850 − R680) | 0.722 | 75.37 | (R850 − R710)/(R850 − R680) | 0.775 | 64.75 | D730 | 0.648 | 56.11 | (R850−R710)/(R850−R680) | 0.741 | 68.99 |
| D730 | 0.701 | 78.05 | R710/R760 | 0.734 | 70.43 | (R850 − R710)/(R850 − R680) | 0.632 | 57.39 | VOG2:(R734 − R747)/(R715 + R726) | 0.711 | 72.78 |
| R710/R760 | 0.696 | 78.77 | VOG2: (R734 − R747)/(R715 + R726) | 0.733 | 70.59 | VOG2: (R734 − R747)/(R715 + R726) | 0.629 | 57.56 | R710/R760 | o.710 | 73.00 |
| VOG2: (R734 − R747)/(R715 + R726) | 0.691 | 79.45 | D730 | 0.698 | 75.04 | R800 − R550 | 0.595 | 60.18 | D730 | 0.691 | 75.34 |
| NDI | 0.677 | 81.21 | NDI | 0.698 | 75.06 | R710/R760 | 0.578 | 61.42 | NDI | 0.682 | 76.34 |
| R800 − R550 | 0.674 | 81.58 | R550 | 0.689 | 76.07 | R750/R710 | 0.554 | 63.13 | R750/R710 | 0.674 | 77.31 |
| 1/R550 − 1/R750 | 0.671 | 81.95 | R750/R710 | 0.688 | 76.30 | NDI | 0.533 | 64.59 | R605/R760 | 0.614 | 84.16 |
| R750/R710 | 0.669 | 82.14 | 1/R700 | 0.663 | 79.30 | R860/R550 | 0.509 | 66.27 | R750/R550 | 0.609 | 84.74 |
| R750/R550 | 0.669 | 82.22 | 1/R700 − 1/R750 | 0.641 | 81.80 | R750/R550 | 0.496 | 67.16 | R860/R550 | 0.607 | 84.92 |
| R860/R550 | 0.661 | 83.19 | R605/R760 | 0.602 | 86.08 | D754/D704 | 0.487 | 67.76 | R750/R700 | 0.601 | 85.54 |
| R605/R760 | 0.647 | 84.82 | 1/R550 − 1/R750 | 0.602 | 86.08 | R750/R700 | 0.449 | 70.17 | R800−R550 | 0.596 | 86.14 |
| (R800 − R635)/(R800 + R635) | 0.625 | 87.55 | R750/R700 | 0.591 | 87.28 | R605/R760 | 0.385 | 74.16 | (R800 − R635)/(R800 + R635) | 0.591 | 86.62 |
| R750/R700 | 0.605 | 89.73 | R860/(R550*R708) | 0.589 | 87.50 | 1/R550 − 1/R750 | 0.374 | 74.80 | R550 | 0.589 | 86.82 |
| 1/R700 − 1/R750 | 0.602 | 90.13 | R800 − R550 | 0.571 | 89.42 | R860/(R550 * R708) | 0.357 | 75.83 | 1/R700 − 1/R750 | 0.587 | 87.02 |
| PSSRb: R800/R635 | 0.599 | 90.40 | (R800 − R635)/(R800 + R635) | 0.570 | 89.55 | 1/R700 − 1/R750 | 0.333 | 7725 | 1/R550 − 1/R750 | 0.587 | 87.06 |
| R550 | 0.596 | 90.80 | R750/R550 | 0.564 | 90.14 | (R800 − R635)/(R800 + R635) | 0.329 | 77.46 | (R800−R650)/(R800 + R650) | 0.552 | 90.66 |
| (R800 − R650)/(R800 + R650) | 0.592 | 91.24 | R860/R550 | 0.559 | 90.69 | PSSRb: B800/B635 | 0.291 | 79.63 | R860/(R550*R708) | 0.548 | 91.05 |
| R860/(R550*R708) | 0.582 | 92.39 | (R800 − R650)/(R800 + R650) | 0.531 | 93.44 | (R800 − R650)/(R800 + R650) | 0.230 | 82.98 | 1/R700 | 0.537 | 92.21 |
| R800/R650 | 0.579 | 92.69 | PSSRb: B800/B635 | 0.447 | 101.56 | R550 | 0.212 | 83.91 | PSSRb: B800/B635 | 0.512 | 94.65 |
| 1/R700 | 0.544 | 96.49 | R695/R420 | 0.446 | 101.62 | R800/R650 | 0.209 | 84.07 | R800/R650 | 0.472 | 98.43 |
| (R800 − R675)/(R800 + R675) | 0.458 | 105.14 | R680 | 0.419 | 104.06 | PSSRa: R800/R680 | 0.202 | 84.47 | (R800 − R675)/(R800 + R675) | 0.433 | 102.04 |
| R800/R675 | 0.436 | 107.30 | R800/R650 | 0.397 | 106.03 | (R800 − R675)/(R800 + R675) | 0.192 | 85.02 | PSSRa: R800/R680 | 0.403 | 104.73 |
| PSSRa: R800/R680 | 0.424 | 108.44 | (R800 − R675)/(R800 + R675) | 0.388 | 106.81 | R800/R675 | 0.181 | 85.59 | R800/R675 | 0.402 | 104.75 |
| R680 | 0.397 | 110.92 | D754/D704 | 0.344 | 110.54 | 1/R700 | 0.180 | 85.65 | R680 | 0.396 | 105.30 |
| D754/D704 | 0.361 | 114.21 | PSSRa: R800/R680 | 0.333 | 111.48 | R672/(R550*R708) | 0.113 | 89.08 | D754/D704 | 0.361 | 108.33 |
| R672/R550 | 0.178 | 129.50 | R800/R675 | 0.323 | 112.31 | R680 | 0.055 | 91.92 | R695/R420 | 0.190 | 121.92 |
| R695/R420 | 0.082 | 136.89 | R672/(R550*R708) | 0.300 | 114.18 | R695/R420 | 0.043 | 92.52 | R672/(R550*R708) | 0.159 | 124.24 |
| R672/(R550*R708) | 0.047 | 139.41 | R672/R550 | 0.024 | 134.84 | R672/R550 | 0.023 | 93.46 | R672/R550 | 0.086 | 129.53 |
Figure 5Predictive ability of the new MDATT index (R705 − R732)/(R705 − R722) and the PLS model.
Figure 6The band positions retained for estimating leaf chlorophyll by PLS regression model in (a) pakchoi var. Shanghai Qing; (b) Chinese white cabbage; (c) Romaine lettuce and (d) the three species combined.
Figure 7The band combination of λ1 and λ2 with the highest R2 when λ3 was fixed at every wavelength from 400–1000 nm. (a) Pakchoi var. Shanghai Qing; (b) Chinese white cabbage; (c) romaine lettuce, and (d) the three species combined.
Figure 8The dynamic variation of R2 when the λ3 was fixed at 705 nm for the dataset of three species combined.