Yuyang Wang1,2, Karsten van Asdonk3, Peter Zijlstra1,2. 1. Department of Applied Physics , Eindhoven University of Technology , 5600 MB , Eindhoven , The Netherlands. 2. Institute for Complex Molecular Systems , 5600 MB , Eindhoven , The Netherlands. 3. Department of Biomedical Engineering , Eindhoven University of Technology , 5600 MB , Eindhoven , The Netherlands.
Abstract
Bioconjugates of plasmonic nanoparticles have received considerable attention due to their potential biomedical applications. Successful bioconjugation requires control over the number and activity of the conjugated proteins and the colloidal stability of the particles. In practice, this requires reoptimization of the conjugation protocol for each combination of protein and nanoparticle. Here, we report a robust and general protocol that allows for the conjugation of a range of proteins to different types of nanoparticles using very short polyethylene-glycol(PEG) linkers, while simultaneously preserving protein activity and colloidal stability. The use of short linkers ensures that the protein is located close to the particle surface, where the refractive index sensitivity and near-field enhancement are maximal. We demonstrate that the use of a Tween20 containing stabilizing buffer is critical in maintaining colloidal stability and protein function throughout the protocol. We obtain quantitative control over the average number of enzymes per particle by either varying the number of functional groups on the particle or the enzyme concentration during incubation. This new route of preparing quantitative protein-nanoparticle bioconjugates paves the way to develop rational and quantitative strategies to functionalize nanoparticles for applications in sensing, medical diagnostics, and drug delivery.
Bioconjugates of plasmonic nanoparticles have received considerable attention due to their potential biomedical applications. Successful bioconjugation requires control over the number and activity of the conjugated proteins and the colloidal stability of the particles. In practice, this requires reoptimization of the conjugation protocol for each combination of protein and nanoparticle. Here, we report a robust and general protocol that allows for the conjugation of a range of proteins to different types of nanoparticles using very short polyethylene-glycol(PEG) linkers, while simultaneously preserving protein activity and colloidal stability. The use of short linkers ensures that the protein is located close to the particle surface, where the refractive index sensitivity and near-field enhancement are maximal. We demonstrate that the use of a Tween20 containing stabilizing buffer is critical in maintaining colloidal stability and protein function throughout the protocol. We obtain quantitative control over the average number of enzymes per particle by either varying the number of functional groups on the particle or the enzyme concentration during incubation. This new route of preparing quantitative protein-nanoparticle bioconjugates paves the way to develop rational and quantitative strategies to functionalize nanoparticles for applications in sensing, medical diagnostics, and drug delivery.
Plasmonic noble metal
nanoparticles are suitable for a large variety
of scientific and commercial applications, such as sensing, spectroscopy,
and energy conversion, due to their outstanding optical properties.[1−4] These optical properties are governed by the unique localized surface
plasmon resonance (LSPR), which are essentially coherently oscillating
electrons in the conduction band induced by radiation with an electromagnetic
wave. The optical properties of plasmonic particles are easily fine-tuned
by changing their size, shape, and material via various well-developed
wet chemistry protocols, leading to a rich library of available plasmonic
nanoparticles directly for research.[5−7] One of the most important
consequences of LSPRs is the localized electromagnetic field around
the nanoparticles, which causes plasmon resonance peak shifts in response
to local refractive index changes.[8] Plasmonic
particles can also act as antennas to modify the photophysical properties
of single fluorescent molecules by modulation of the excitation rate,
radiative, and nonradiative decay rate.[9−12] Plasmonic particles are therefore
ideal candidates for enhanced molecular detection and are indispensable
tools in single-molecule imaging and biosensing.[4]Bioconjugates of plasmonic particles have therefore
received considerable
attention, for example, particles functionalized with proteins, peptides,
or oligonucleotides are increasingly found as important players in
biosensors,[13−17] nanocarriers,[18,19] and nanotherapeutics.[20−23] Nevertheless, complex molecular interactions exist at the interface
between the nanoparticle and the conjugated biomolecules. The colloidal
stability of the nanoparticles, the hydrodynamic behavior of the suspending
medium, and the folded structure of the biomolecules all play pivotal
roles in successful bioconjugation.[24] Several
challenges are associated with the controlled preparation of nanoparticle
bioconjugates, especially via a robust and general protocol. To begin
with, there is a large diversity of surface ligands including surfactants
and polymers that keep the as-synthesized nanoparticles colloidally
stable. In practice, this requires a tailored ligand exchange protocol
to keep each type of particle stable during the conjugation. Second,
quantitative determination of the number of biomolecules per nanoparticle
is inherently difficult because reaction stoichiometry often does
not directly relate to the added molar ratio of nanoparticle and biomolecule.
Third, the inherent dispersion in nanoparticle size and ligand density
could complicate the control over colloidal stability and biomolecular
display on nanoparticles.Various strategies to conjugate biomolecules
to colloidal nanoparticles
have been proposed.[25] Biomolecules can
be directly adsorbed onto the nanoparticle’s surface by physisorption.
However, physisorption often leads to (local) unfolding of the biomolecules
resulting in significant loss of bioactivity.[26−29] Bioconjugation via a ligand or
a polymeric linker is widely used to avoid direct contact of the biomolecules
with the nanoparticle surface. Standard bioconjugation techniques
have been introduced using bifunctional cross-linkers. Electrostatic
adsorption via linkers with charged end groups has been shown to effectively
conjugate proteins to gold nanoparticles.[30,31] Multibranched polymers and dendrimers have also been used for bioconjugation
via various surface chemistries and have been particularly useful
to functionalize particles for drug delivery and applications in undiluted
complex media.[32,33] The most widely used covalent
approach uses N-(3-dimethylaminopropyl)-N-ethylcarbodiimide hydrochloride (EDC) and its derived cross-linkers
connecting primary amines on the biomolecule with carboxyls on the
particle via amide bonds.[25] Both gold and
silver nanoparticles have been conjugated to proteins and peptides
using such EDC-mediated protocols.[34−36] However, the required
strict control of pH and ionic strength leaves only a narrow window
in which the particles remain colloidally stable, and this window
varies from colloid to colloid depending on the charge and type of
capping ligand. Bio-orthogonal approaches using click chemistry have
shown to allow accurate quantitation of the average number of biomolecules
per particle.[37−39] However, click reactions rely on hydrophobic azide
or alkyne groups on either the particle or on the biomolecule, which
often leads to reduced solubility and colloidal stability in aqueous
environments.[40] Conjugation via biotin-streptavidin
linkers has been used in the study of nanoparticle-based biosensors
on ensemble and single-molecule levels and the study of nanoparticle
assemblies.[13,41−44] Being a water-soluble small molecule,
biotin is typically conjugated to the surface of nanoparticles via
poly(ethylene)-glycol(PEG) cross-linkers, without significant aggregation
of the nanoparticles.[25,45] However, maintaining colloidal
stability requires long PEG linkers to prevent aggregation during
centrifugation or at physiological salt conditions, pushing the conjugated
biomolecules away from the particle’s surface where the refractive
index sensitivity and fluorescence enhancements are highest.[15,46] Although it has been observed that histidine-tagged biomolecules
can effectively conjugate to inorganic quantum dots with zero-length
spacing,[47] no general protocols exist that
allow for the conjugation of a range of proteins to different types
of plasmonic nanoparticles using short linkers while simultaneously
preserving protein activity and colloidal stability.In this manuscript, we demonstrate a general and robust approach
to quantitatively conjugate a range of enzymes to a range of metal
nanoparticles using short linkers. Owing to the different stabilizing
ligands employed during the synthesis of the particles, we demonstrate
that the use of a Tween20 containing stabilizing buffer is critical
in maintaining colloidal stability and protein function throughout
the functionalization process. To show the generality of the approach,
we conjugate alkaline phosphatase (ALP), β-galactosidase (β-gal),
and horseradish peroxidase (HRP) to as-synthesized gold nanospheres,
gold nanorods, and silver nanospheres that each display different
surface ligands and different ζ-potentials. We obtain quantitative
control over the average number of enzymes per particle by changing
either the number of functional groups on the particle or by changing
the enzyme concentration during incubation. Quantitative conjugation
of proteins to nanoparticles will enable the use of these bioconjugates
in nanomedicine, cellular targeting, and biosensing. Although displayed
with diluted buffers, our method is not limited by real undiluted
samples, such as serum and whole blood, due to the high conjugation
specificity and detection sensitivity.
Experimental
Section
Nanoparticle PEGylation
Gold and silver nanospheres
(40 nm in diameter) stabilized in sodium citrate buffer were purchased
from Sigma-Aldrich. Gold nanorods (60 × 30 nm2, extinction
peak 610 nm) were purchased from Nanoseedz. The gold and silver nanospheres
were directly used for PEGylation, whereas gold nanorods were centrifuged
once and resuspended in an aqueous solution containing 1 mM CTAB.
SH-PEG-biotin (1 kDa) was purchased from Nanocs and SH-PEG-methyl
(800 Da) was purchased from Sigma-Aldrich. Stock solutions of PEG
were aliquoted at 2 mM in MQ water and stored frozen at −20
°C. The mixed solutions of PEG with varying fractions (χ) of SH-PEG-biotin were then prepared in
10 mM Tris(2-carboxyethyl)phosphine hydrochloride (TCEP) solution
in MQ water to prevent formation of disulfide bridges.For PEGylation,
100 μL of nanoparticle solution was centrifuged in to a pellet
(9000 rpm, 10 min), and a 100 μL solution of the mixed PEG-solution
at 1 mM total concentration was added to the pellet, vortexed, and
incubated for at least 4 h. After PEGylation, the PEGylated nanoparticles
were centrifuged and redispersed at least 5× in a Tris or PBS
buffer with 0.1% of Tween20 added to it. The addition of Tween20 was
crucial as it ensured colloidal stability throughout the protocol
with no significant aggregation (visible as a red-shift and/or broadening
of the extinction spectrum) and prevents loss of particles due to
sticking to the walls of the eppendorf tube.
Enzyme Conjugation
Streptavidin-conjugated enzyme (β-galactosidase,
alkaline phosphatase, and horseradish peroxidase) were obtained from
Sigma-Aldrich. Stock solutions of enzyme were prepared in buffer.
The buffer used for ALP was 25 mM Tris with 0.1 wt % Tween20 at pH
9, and the buffer for β-gal and HRP was 10 mM phosphate buffered
saline with 0.1 wt % Tween20 at pH 7.4. For enzyme conjugation, stock
solutions of the enzyme were added to PEGylated nanoparticle solutions
to a final concentration of enzyme ranging from 1–100 nM. The
nanoparticle-enzyme mixture was vortexed for 10 s and kept at −4
°C for at least 12 h before being centrifuged and redispersed
at least 5× in the same Tween20 containing buffer. This ensured
that nearly no free enzyme was left in the solution (see Figure S1
in the Supporting Information). Despite
different ionic strength and pH of the buffers, we found that the
use of Tween20 was again crucial to ensure colloidal stability.
Quantification of Conjugate Stoichiometry
The prepared
bioconjugate was then ready for the determination of the final nanoparticle
and enzyme concentration, the ratio of which provides the stoichiometric
number of enzymes per particle. The former was determined by UV–vis
extinction spectroscopy for which the extinction spectra of the nanoparticle
suspensions were measured in a Shimadzu 2600 spectrophotometer in
a quartz cuvette with an optical path length of l = 3 mm. The nanoparticle concentration was then determined by the
Lambert–Beer law , where A is
the measured extinction value
and ϵ is the molar extinction
coefficient.To determine the concentration of enzymes, the
fluorogenic enzyme substrate 7-hydroxy-9H-(1,3-dichloro-9,9-dimethylacridin-2-one)
(DDAO) was used for ALP and β-gal. DDAOphosphate and DDAOgalactose
were used as substrates for ALP and β-gal, respectively, and
Amplex Red was used for HRP in the presence of hydrogen peroxidase.
All enzyme substrates were purchased from Thermofisher. For DDAO-based
enzyme reactions, the enzymes cleave the phoshate or galactose groups,
leading to the recovery of DDAO fluorescence, whereas Amplex Red reacts
with hydrogen peroxidase in the presence of HRP, producing highly
fluorescent resorufin. Stock solutions of the substrates were prepared
in dimethyl sulfoxide (DMSO) and stored at −20 °C before
dissolving in Tris or PBS buffer for enzymatic assays. A Fluoroskan
Ascent FL well plate reader (Thermofisher) was used to read out the
fluorogenic enzymatic reactions from 96-well plates. In an enzymatic
assay, a total volume of 100 μL of solution was pipetted in
to each well and mixed, after which the fluorescence signal was recorded
as a function of time. An excitation/emission filter pair of 647/660
nm was used for DDAO-based reactions, and 560/580 nm was used for
Amplex Red reactions.
Results and Discussion
In Figure a, we
show the workflow of the bioconjugation in which the nanospheres and
nanorods with different native surface charges are used for conjugation
with streptavidin-conjugated enzymes. Colloidal synthesis of plasmonic
metal nanoparticles relies on the reduction of metal ions in aqueous
solution, and the most widely used plasmonic nanoparticles prepared
are gold and silver nanospheres and gold nanorods. For the synthesis
of gold and silver nanospheres (AuNS, AgNS), citric acid is usually
used as a reducing agent and as a stabilizer, preventing the aggregation
of nanoparticles by a high density of negative charges on the surface.[48,49] For the synthesis of gold nanorods (AuNR), high concentrations (>10
mM) of the surfactant CTAB have to be present acting as a shape regulator,
guiding the growth of spherical seeds into elongated nanoparticles.
As a result, the synthesized AuNRs are coated with a dense bilayer
of positively charged CTAB molecules providing colloidal stability.
Figure 1
(a) Workflow
of the bioconjugation. Prior to the protocol, plasmonic
nanoparticles (yellow) are stabilized by their native ligands (green)
in an ionic buffer (gray). After centrifugation, the pellet from the
native solution is incubated with a mixed PEG solution (cyan) for
PEGylation. After PEGylation, the mixture is purified by centrifugation
(5×) followed by redispersion in Tween20 containing buffer (blue),
indicated as state II. Enzyme stock solutions (red) prepared in Tween20
containing buffer are then added to the mixture, followed again by
incubation and purification by centrifugation (4×). The nanoparticle-enzyme
bioconjugates are finally dispersed in Tween20 containing buffer,
indicated by state III. (b) Sketches of the nanoparticle surface chemistry
in states I, II, and III as shown in part a. In state I, the nanoparticles
are stabilized by either the positively charged surfactant CTAB (AuNR)
or by negatively charged citrate ions (AuNS and AgNS). In state II,
the nanoparticles are stabilized by a mixed PEG layer (black) with
exposed biotin groups (cyan) and Tween20 (dark blue). In state III,
the enzyme is conjugated via biotin–streptavidin linkage. (c)
Molecular structure of the thiolated PEG linkers and Tween20 used
in the bioconjugation. The spherical shape of the nanoparticles is
only for illustration and does not attempt to describe the true geometry.
(a) Workflow
of the bioconjugation. Prior to the protocol, plasmonic
nanoparticles (yellow) are stabilized by their native ligands (green)
in an ionic buffer (gray). After centrifugation, the pellet from the
native solution is incubated with a mixed PEG solution (cyan) for
PEGylation. After PEGylation, the mixture is purified by centrifugation
(5×) followed by redispersion in Tween20 containing buffer (blue),
indicated as state II. Enzyme stock solutions (red) prepared in Tween20
containing buffer are then added to the mixture, followed again by
incubation and purification by centrifugation (4×). The nanoparticle-enzyme
bioconjugates are finally dispersed in Tween20 containing buffer,
indicated by state III. (b) Sketches of the nanoparticle surface chemistry
in states I, II, and III as shown in part a. In state I, the nanoparticles
are stabilized by either the positively charged surfactant CTAB (AuNR)
or by negatively charged citrate ions (AuNS and AgNS). In state II,
the nanoparticles are stabilized by a mixed PEG layer (black) with
exposed biotin groups (cyan) and Tween20 (dark blue). In state III,
the enzyme is conjugated via biotin–streptavidin linkage. (c)
Molecular structure of the thiolated PEG linkers and Tween20 used
in the bioconjugation. The spherical shape of the nanoparticles is
only for illustration and does not attempt to describe the true geometry.It is ideal to fully remove the citrate or CTAB
in the nanoparticle
solution, since biological applications of nanoparticles cannot be
pursued with either citrate or CTAB at high concentration due to their
cytotoxity.[50,51] A simple removal usually will
cause aggregation because the surface charge that provides electrostatic
stabilization is diminished. SH-PEGs and their derivatives are therefore
often used to remove most of the surfactant and act as a steric
stabilizer for the particles.[5,45,52] PEGylation of nanoparticles has been widely reported in literature,[5,7,45,52] and from these studies, it is known that colloidal stability in
high ionic strength solutions is only achieved with PEG linkers >5
kDa. To facilitate bioconjugation via shorter PEG linkers <1 kDa,
we adapted the PEGylation protocol by Liao et al.[45] and used a solution of mixed SH-PEG-biotin and SH-PEG-methyl
in the presence of Tween20 to PEGylate and simultaneously biotinylate
the surface of nanoparticles with a controlled fraction of biotin
groups (Figure b).
The use of a mixed PEG layer enables us to vary the number of biotin
groups per particle while keeping the total PEG coverage constant.
This allows us to directly compare the different functionalization
protocols.The use of short PEG linkers decreases the absolute
distance between
the molecule and nanoparticle surface, maximizing the refractive index
sensitivity and fluorescence enhancements. In the ideal chain model,[53] the end-to-end distance of a polymer chain scales
as √N, with N as the number
of segements in the chain. Reducing the PEG length from 5 kDa to 1
kDa therefore reduces the time-averaged spacing between the biomolecule
and the particle by ∼2 nm, which is substantial considering
the short length of the localized electric field around these small
particles. As an example, the 1/e decay length of
field intensity is about 5 nm for a gold nanorod with a diameter
of 30 nm.[46]The colloidal stability
of the suspensions can be conveniently
monitored using UV–vis spectroscopy, as aggregation of the
particles will result in a red-shift of the plasmon resonance and
eventually a loss of extinction. In Figure , we show the UV–vis spectra of the
nanoparticles before and after bioconjugation with streptavidin-ALP
in Tween20 containing Tris buffer at pH 9, and also the spectra of
the bioconjugate prepared without Tween20 in the buffer throughout
the whole protocol. We observed that for all nanoparticles, no obvious
aggregation was found as there was no large shift (<10 nm)
in extinction peaks, and no major loss of nanoparticles was found
when Tween20 was present throughout the bioconjugation (see Figure
S2 in the Supporting Information). In contrast,
the UV–vis spectra of bioconjugates prepared without Tween20
stabilization showed a 4–10× decrease in final extinction
values. This is caused by the formation of large aggregates of particles
that cannot be redispersed. Tween20 prevents this aggregation by stabilizing
the nanoparticles’ surface by transiently absorbing to areas
of low PEG density. This indicates that Tween20 played a crucial role
in boosting the colloidal stability of the nanoparticles. The minor
decrease of peak extinction when Tween20 was present during the conjugation
compared to stock solution was largely from pipetting losses during
the centrifugation cycles. The bigger loss in extinction for AgNS
could be due to partial surface oxidation, reducing their stability.
Figure 2
UV–vis
extinction spectra of (a) AuNR, (b) AuNS, and (c)
AgNS before and after enzyme conjugation in states I (solid line)
and III (dashed line). For comparison, we also show the spectra in
state III where no Tween20 was used in the whole protocol. In the
insets, we show the transmission electron microscope (TEM) images
of the corresponding nanoparticles used in the conjugation.
UV–vis
extinction spectra of (a) AuNR, (b) AuNS, and (c)
AgNS before and after enzyme conjugation in states I (solid line)
and III (dashed line). For comparison, we also show the spectra in
state III where no Tween20 was used in the whole protocol. In the
insets, we show the transmission electron microscope (TEM) images
of the corresponding nanoparticles used in the conjugation.The ζ-potentials of the nanoparticles in
states I, II, and
III were also measured to understand the surface modification of PEGylation
and bioconjugation as shown in Table . As can be seen, the ζ-potentials of nanoparticles
in their native solutions vary due to different surface ligands, and
after PEGylation, all particles showed ζ-potentials of about
−15 mV, indicating the successful and reproducible modification
of the nanoparticle surfaces regardless of their native surface charges.
Note here that the ζ-potential of PEG coated nanoparticles was
reported by others to be PEG-length dependent, and ζ-potentials
closer to zero could be found for PEGylated nanoparticles with longer
PEGs (>5 kDa).[54] After the bioconjugation
with ALP, the ζ-potential of all nanoparticles showed a decrease
to about −23 mV, indicating the successful binding of the negatively
charged streptavidin-enzyme complex. The ζ-potential of β-gal-nanoparticle
bioconjugates was found to be of similar magnitude.
Table 1
Extinction Coefficients of the Nanoparticles
at the Wavelengths at Which Exctintion Peaks and ζ-Potentials
of Nanoparticles and Nanoparticle-ALP Bioconjugates in the Three States
are Displayed in Figure
Nanoparticle (dimensions)
ϵexc (M–1 cm–1)
cNP (nM)
ζ (mV) state I
ζ (mV) state II
ζ (mV) state
III
AuNR (60 × 30 nm2)
2.5 × 109
0.8 ± 0.05
26.2 ± 0.757
–14.9 ± 1.04
–22.6 ± 1.67
AuNS (40 nm)
8.4 × 109
0.12 ± 0.01
–37.8 ± 0.75
–15.3 ± 0.551
–23.8 ± 0.513
AgNS (40 nm)
3.7 × 1010
0.066 ± 0.005
–39.1 ± 1.05
–15.3 ± 1.97
–22.0 ± 0.723
After the bioconjugation,
the enzyme concentration was determined
using the fluorogenic substrates DDAOp, DDAOg, and Amplex Red. Note
here that fluorogenic enzymatic reactions were specifically used for
quantitative determination rather than optical absorption or extinction
to prevent interference from the extinction caused by the nanoparticles
and other biomolecules in solution. Now the only interference could
be from other fluorescent species, which are absent in our solutions
(the quantum yield of gold nanoparticles is <10–5).[55] The enzymatic reactions were visualized
as progress curves of fluorescence intensity as a function of time.
The enzyme concentration was then determined from the initial velocity V (that is, the initial rate of fluorescence increase) by
assuming Michaelis–Menten kinetics (see Figure S3 in the Supporting Information). As an example, we demonstrate
the determination of the number ALPs per gold nanorod in Figure . The average number
of ALPs per gold nanorod N is given the by the fraction of the concentration of active
enzymes c and the
concentration of nanoparticles in the bioconjugate cThe effective concentration of conjugated
enzyme, c, was determined
from the ratio between the initial velocity of the bioconjugate and
the free enzyme at a known concentration, given bywhere V0 and V0 (in relative fluorescence
units, RFU, per second)
are the initial velocity of the bioconjugate and the free enzyme solution
with a known concentration. In Figure a, we show the progress curves of 1 nM free streptavidin-conjugated
ALP and the AuNR-ALP bioconjugate. The initial-phase of the progress
curve is fitted with a linear equation in the form of V = a + V0t, with the slope V0 as the initial velocity.
Significant nonlinearity of the progress curves sets in after 20 s
due to substrate depletion. In this particular case, we find c = 10 nM, which resulted
in N = 12 based
on the nanoparticle concentration of 0.78 nM.
Figure 3
(a) Progress curves of
1 nM free streptavidin-ALP and a AuNR-ALP
bioconjugate prepared with 50 nM ALP during conjugation. The corresponding
fits to the initial phase of the progress curves yield the initial
velocity V0. (b) Initial velocities of
5 nM free ALP (blue, left), AuNR-ALP bioconjugate (green), and the
supernatant (blue, right).
(a) Progress curves of
1 nM free streptavidin-ALP and a AuNR-ALP
bioconjugate prepared with 50 nM ALP during conjugation. The corresponding
fits to the initial phase of the progress curves yield the initial
velocity V0. (b) Initial velocities of
5 nM free ALP (blue, left), AuNR-ALP bioconjugate (green), and the
supernatant (blue, right).One question that remains to be addressed is whether the nanoparticle-conjugated
enzymes are as active when conjugated to the nanoparticles as in their
free state. More often than not enzymes conjugated to nanoparticles
show significantly decreased activity due to conformational changes
during, e.g., physisorption or covalent enzyme modifications that
are unfavorable to maintain activity. In contrast, in some circumstances,
an increased enzyme activity upon immobilization has been reported.[56] The mechanism behind the nanoparticle-induced
enhancement is complex as it involves the enzyme’s conformation,
accessibility of the active site, and the local chemical environment
(charge, pH) near the particle that may promote or inhibit activity.
Nevertheless, it has been confirmed that the unique microenvironment
surrounding the nanoparticles and the enzyme’s physicochemical
interaction with the particle may modify the enzyme’s catalytic
activity.To assess the enzyme’s activity before and
after conjuation,
we performed a supernatant assay of the AuNR bioconjugates prepared
with 50 nM ALP. In Figure b, we show the initial velocities of 5 nM free streptavidin-ALP
and the sum of the activities of the bioconjugate after centrifugation
and the supernatant. We observe that the enzyme activity of the bioconjugate
was nearly 100% of the original activity. We attribute the high retention
of activity to the dense PEG layer on the particle and on the noncovalent
biotin–streptavidin interactions due to which very little to
no modifications of protein structure are expected during the bioconjugation.We now demonstrate that the number of enzymes per particle can
be quantitatively controlled for different enzymes and particles by
(1) controlling the enzyme concentration during incubation or (2)
controlling the fraction of biotin groups in the mixed PEG layer.
To demonstrate the effect of enzyme concentration used during the
bioconjugation on N, we measured N for
bioconjugates prepared with a concentration series of ALP and β-gal.
In Figure , we show
the measured N determined
for AuNR, AgNS, and AuNS coated with a mixed layer of PEG with a biotin
fraction χ = 0.4. As we can see
in Figure a, N for nanoparticle-ALP bioconjugates
can be controlled by the ALP concentration giving access to stoichiometries
ranging from monovalent up to 20 enzymes per particle when the enzyme
concentration was increased from 1 to 100 nM. Note that N is a measurement of active enzymes
only and may not represent the true coverage of enzyme molecules since
inactive enzymes do not contribute to the initial velocity, meaning
that we are ’blind’ in our measurement to the enzymes
that are inactive already in the stock solutions. Nevertheless, the
maximum value of N is limited by number of biotin groups and by the physical size of
the enzyme compared to the particle. Despite their surface area, the
number of enzymes on the AuNRs reached a plateau at the highest enzyme
concentrations, whereas the coverage on the nanospheres was not saturated
yet. We hypothesize that this might be due to the less efficient removal
of CTAB from the AuNR surface leading to a lower number of biotin
groups per particle.
Figure 4
(a) Number of ALP par particle as a function of ALP concentration
for AuNR, AuNS, and AgNS bioconjugates. (b) Number of β-gal
per particle as a function of β-gal concentration for AuNR bioconjugates.
χ = 0.4 is fixed during bioconjugation.
(a) Number of ALP par particle as a function of ALP concentration
for AuNR, AuNS, and AgNS bioconjugates. (b) Number of β-gal
per particle as a function of β-gal concentration for AuNR bioconjugates.
χ = 0.4 is fixed during bioconjugation.The generality of the protocol is demonstrated
in Figure b, where
we show N for AuNR-β-gal
and AuNR-HRP
bioconjugates. We found that N for β-gal and HRP also scaled with enzyme concentration
during incubation and reached approximately N = 10 and 25, respectively, at 100 nM incubation.
The lower N for AuNR-β-gal
compared to ALP and HRP is likely due to the bigger physical size
of β-gal (520 kDa) compared to those of ALP (140 kDa) and HRP
(44 kDa), leading to a larger footprint of the protein.The
theoretical maximum number of enzymes per particle N for ALP and β-gal
can be estimated by assuming that the particles exhibit a perfectly
spherical or spherically capped cylindrical geometry. These particle
shapes exhibit a surface area A that for spherical particles can be written as A = 4πr2 with r as the particle radius. For a spherically
capped cylinder, the surface area available for enzyme conjugation
is given by A = 4πr2 + 2πr(L – 2r), where r is the radius of the rod and L is its length. The
maximum number of enzymes then follows fromwhere A is the surface area of the respective
particle shape, A is
the estimated footprint
of a single enzyme molecule, and f = 0.4 is a correction
factor to account for the fact that random sequential absorption leads
to a maximum surface coverage of approximately 40%.[57,58] The random sequential absorption describes a process where enzymes are
introduced randomly, and irreversibly adsorb on a surface. It is
commonly used to estimate the maximum coverage of spherical objects
such as proteins on a surface. The footprint A of single enzymes without streptavidin
was estimated using data from the protein databank, giving A = 252 nm2 for
520 kDa β-gal, A = 60 nm2 for 140 kDa ALP, and A = 31 nm2 for 44 kDa HRP. In Table , we show N based on these estimates.
Our experimental N of up to 20, 11,
and 24 for ALP, β-gal, and HRP, respectively, are thus reasonable
numbers and indicate that the found maximum coverage is limited by
the available surface area for random sequential absorption of the
enzymes. Small deviations from the estimated maximum number could
be due to the actual density of biotin on the nanoparticle surface,
the presence of streptavidin, the size-dispersion of the particles,
and electrostatic-repulsion between neighboring enzymes leading to
a lower coverage than expected from the random sequential absorption
model.
Table 2
Estimated Maximum Number of Enzymes
Per Particle N
Nanoparticle
ANP (nm2)
NALPmax
Nβ-galmax
NHRPmax
AuNR (60 × 30 nM2)
5650 nm2
37
9
73
AuNS, AgNS (40 nM)
5030 nm2
34
8
65
Finally, we demonstrate that the biotin fraction
χ can also be used to tune N. We prepared PEGylated
AuNRs with χ ranging from 0.001
up to 0.4 and used 10
nM ALP for bioconjugation. As shown in Figure , N increases from 1 to 9 with increasing χ. This indicates that by increasing the number of
biotins on the nanoparticle surface, the capture of the enzyme from
the solution becomes more efficient leading to a larger number of
enzymes per particle. The result also shows that SH-PEG-methyl (800
Da) provides excellent antifouling because at low biotin fractions,
we find a strongly reduced number of enzymes per particle, indicating
little to no nonspecific binding of streptavidin-conjugated enzymes
to SH-PEG-methyl.
Figure 5
Number of ALP as a function of biotin fraction χ at fixed ALP concentration of 10 nM during
conjugation.
Number of ALP as a function of biotin fraction χ at fixed ALP concentration of 10 nM during
conjugation.As an outlook of our approach,
we envision the resolution of the
number and position of the conjugated enzymes by using microscopy
methods. Transmission or scanning electron microscopes, for example,
can be employed to perform this task after immunolabeling the enzymes
with very small (<5 nm) metallic nanoparticles. The number and
distribution of enzymes can then be visualized with the help of the
high electron density of the labeling nanoparticles.[59] Stochastic super-resolution microscopy based on sequentially
blinking fluorophores can also be used as a powerful tool to localize
single molecules on a single-particle basis and has been successfully
performed on gold nanoparticles with high spatial resolution.[19,60,61]Understanding the number
and distribution of enzymes on single
particles is important in a number of applications. For example, it
has been found that the density of enzymes on the nanoparticle surface
directly impacts the enzyme activity, which needs to be taken into
account when using enzymatic conversions for label-free analyte detection.[62] Enzyme quantity and distribution were also established
to be crucial in the performance of enzyme-powered nanomotors, where
a certain threshold of enzyme numbers and asymmetric distribution
was needed to generate nanoparticle motion.[18,19]
Conclusion
We have developed a general approach to quantitatively
conjugate
enzymes to plasmonic nanoparticles including AuNRs, AuNS, and AgNS.
The nanoparticles were first PEGylated with a mixture of SH-PEG-biotin
and SH-PEG-methyl and then effectively stabilized in an enzyme reaction
buffer containing Tween20. Then the PEGylated nanoparticles were conjugated
to streptavidin-conjugated enzymes in the same buffer. We showed that
our approach minimized particle aggregation and facilitated quantification
of the number of enzymes per nanoparticle using fluorogenic enzyme
assays, and we demonstrated that the bound enzymes maintained their
biological activity. We could control the number of specifically bound
enzymes per particle by varying the enzyme concentration and biotin
fraction on the nanoparticle surface. Our protocol features high robustness
and generality, due to the use of Tween20 as a stabilizing agent,
and is highly versatile and flexible due to the use of commercially
available mixed layers of PEG. This new route of quantitative protein-nanoparticle
bioconjugate preparation that we demonstrated here may assist in the
development of rational strategies to use nanoparticle bioconjugates
in sensing, medical diagnostics, and other applications.