Literature DB >> 31539041

Distribution patterns of fungal taxa and inferred functional traits reflect the non-uniform vertical stratification of soil microhabitats in a coastal pine forest.

Kerri Kluting1, Karina Clemmensen2, Stanislovas Jonaitis3, Rimvydas Vasaitis2, Sara Holmström4, Roger Finlay2, Anna Rosling1.   

Abstract

In boreal systems, soil profiles typically consist of distinct stratified horizons, with organic layers at the surface overlying deeper mineral horizons providing microhabitat variation along a depth gradient, and vertical stratification of fungal communities along such soil profiles is commonly observed. We studied fungal community structure in a coastal pine forest along a gradient of decreasing influence from the coast. In this system, the vertical stratification pattern of soil microhabitats (defined here as organic, mineral with roots and mineral without roots: O, MR and MN, respectively) is non-uniform; organic horizons are sometimes buried under drifting sand dunes. Our results show that soil microhabitats are distinct with respect to physiochemical characteristics, community composition and OTU richness. While community composition was partly related to depth and distance from the coastal forest edge, microhabitat appeared to have the strongest influence. A closer inspection of the OTUs with the highest relative sequence abundance within each microhabitat revealed that microhabitats support functionally distinct fungal communities with respect to trophic mode and growth morphology. These results suggest that in coastal pine forests, variation in soil microhabitats contributes to the high fungal diversity found belowground and may play an important role in optimizing nutrient cycling. © FEMS 2019.

Entities:  

Keywords:  zzm321990 Pinus sylvestriszzm321990 ; zzm321990 Sarcodonzzm321990 ; fungal community; niche; sand dune; soil

Mesh:

Substances:

Year:  2019        PMID: 31539041      PMCID: PMC6835140          DOI: 10.1093/femsec/fiz149

Source DB:  PubMed          Journal:  FEMS Microbiol Ecol        ISSN: 0168-6496            Impact factor:   4.194


  16 in total

1.  Molecular identification of ectomycorrhizal mycelium in soil horizons.

Authors:  Renske Landeweert; Paula Leeflang; Thom W Kuyper; Ellis Hoffland; Anna Rosling; Karel Wernars; Eric Smit
Journal:  Appl Environ Microbiol       Date:  2003-01       Impact factor: 4.792

2.  New primers to amplify the fungal ITS2 region--evaluation by 454-sequencing of artificial and natural communities.

Authors:  Katarina Ihrmark; Inga T M Bödeker; Karelyn Cruz-Martinez; Hanna Friberg; Ariana Kubartova; Jessica Schenck; Ylva Strid; Jan Stenlid; Mikael Brandström-Durling; Karina E Clemmensen; Björn D Lindahl
Journal:  FEMS Microbiol Ecol       Date:  2012-07-27       Impact factor: 4.194

3.  ITS all right mama: investigating the formation of chimeric sequences in the ITS2 region by DNA metabarcoding analyses of fungal mock communities of different complexities.

Authors:  Anders Bjørnsgaard Aas; Marie Louise Davey; Håvard Kauserud
Journal:  Mol Ecol Resour       Date:  2016-11-24       Impact factor: 7.090

4.  Genome-based estimates of fungal rDNA copy number variation across phylogenetic scales and ecological lifestyles.

Authors:  Lotus A Lofgren; Jessie K Uehling; Sara Branco; Thomas D Bruns; Francis Martin; Peter G Kennedy
Journal:  Mol Ecol       Date:  2019-02-06       Impact factor: 6.185

5.  Competitive avoidance not edaphic specialization drives vertical niche partitioning among sister species of ectomycorrhizal fungi.

Authors:  Alija B Mujic; Daniel M Durall; Joseph W Spatafora; Peter G Kennedy
Journal:  New Phytol       Date:  2015-09-22       Impact factor: 10.151

6.  Spatial separation of litter decomposition and mycorrhizal nitrogen uptake in a boreal forest.

Authors:  Björn D Lindahl; Katarina Ihrmark; Johanna Boberg; Susan E Trumbore; Peter Högberg; Jan Stenlid; Roger D Finlay
Journal:  New Phytol       Date:  2007       Impact factor: 10.151

7.  Roots and associated fungi drive long-term carbon sequestration in boreal forest.

Authors:  K E Clemmensen; A Bahr; O Ovaskainen; A Dahlberg; A Ekblad; H Wallander; J Stenlid; R D Finlay; D A Wardle; B D Lindahl
Journal:  Science       Date:  2013-03-29       Impact factor: 47.728

8.  Ectomycorrhizal fungal communities on seedlings and conspecific trees of Pinus mugo grown on the coastal dunes of the Curonian Spit in Lithuania.

Authors:  Algis Aučina; Maria Rudawska; Tomasz Leski; Darius Ryliškis; Marcin Pietras; Edvardas Riepšas
Journal:  Mycorrhiza       Date:  2010-10-12       Impact factor: 3.387

9.  The dark side is not fastidious--dark septate endophytic fungi of native and invasive plants of semiarid sandy areas.

Authors:  Dániel G Knapp; Alexandra Pintye; Gábor M Kovács
Journal:  PLoS One       Date:  2012-02-29       Impact factor: 3.240

10.  How quantitative is metabarcoding: A meta-analytical approach.

Authors:  Philip D Lamb; Ewan Hunter; John K Pinnegar; Simon Creer; Richard G Davies; Martin I Taylor
Journal:  Mol Ecol       Date:  2018-12-07       Impact factor: 6.185

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  2 in total

Review 1.  Methods used for the study of endophytic fungi: a review on methodologies and challenges, and associated tips.

Authors:  Jefferson Brendon Almeida Dos Reis; Adriana Sturion Lorenzi; Helson Mario Martins do Vale
Journal:  Arch Microbiol       Date:  2022-10-20       Impact factor: 2.667

2.  Naming the untouchable - environmental sequences and niche partitioning as taxonomical evidence in fungi.

Authors:  Faheema Kalsoom Khan; Kerri Kluting; Jeanette Tångrot; Hector Urbina; Tea Ammunet; Shadi Eshghi Sahraei; Martin Rydén; Martin Ryberg; Anna Rosling
Journal:  IMA Fungus       Date:  2020-11-03       Impact factor: 3.515

  2 in total

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