Literature DB >> 31529306

Rapid culture-based identification of Shiga toxin-producing Escherichia coli and Shigella spp./Enteroinvasive E. coli using the eazyplex® EHEC complete assay.

Anika Penzel1, Katrin Schützler1, Jana Dröge1, Alexander Mellmann2, Ralf Ehricht3, Ines Engelmann4, Sascha D Braun3, Benjamin T Schleenvoigt5, Bettina Löffler1, Jürgen Rödel6.   

Abstract

Shiga toxin-producing Escherichia coli (STEC) and Shigella spp./enteroinvasive E. coli (EIEC) are common diarrheagenic bacteria that cause sporadic diseases and outbreaks. Clinical manifestations vary from mild symptoms to severe complications. For microbiological diagnosis, culture confirmation of a positive stool screening PCR test is challenging because of time-consuming methods for isolation of strains, wide variety of STEC pathotypes, and increased emergence of non-classical strains with unusual serotypes. Therefore, molecular assays for the rapid identification of suspect colonies growing on selective media are very useful. In this study, the performance of the newly introduced eazyplex® EHEC assay based on loop-mediated isothermal amplification (LAMP) was evaluated using 18 representative STEC and Shigella strains and 31 isolates or positive-enrichment broths that were collected from clinical stool samples following screening by BD MAX™ EBP PCR. Results were compared to real-time PCR as a reference standard. Overall, sensitivities and specificities of the eazyplex® EHEC were as follows: 94.7% and 100% for Shiga toxin 1 (stx1), 100% and 100% for stx2, 93.3% and 97.1% for intimin (eae), 100% and 100% for enterohemolysin A (ehlyA), and 100% and 100% for invasion-associated plasmid antigen H (ipaH) as Shigella spp./EIEC target, respectively. Sample preparation for LAMP took only some minutes, and the time to result of the assay ranged from 8.5 to 13 min. This study shows that eazyplex® EHEC is a very fast and easy to perform molecular assay that provides reliable results as a culture confirmation assay for the diagnosis of STEC and Shigella spp./EIEC infections.

Entities:  

Keywords:  E. coli; LAMP; Shiga toxin; Shigella; Stool culture

Year:  2019        PMID: 31529306     DOI: 10.1007/s10096-019-03704-x

Source DB:  PubMed          Journal:  Eur J Clin Microbiol Infect Dis        ISSN: 0934-9723            Impact factor:   3.267


  38 in total

1.  Loop-mediated isothermal amplification of DNA.

Authors:  T Notomi; H Okayama; H Masubuchi; T Yonekawa; K Watanabe; N Amino; T Hase
Journal:  Nucleic Acids Res       Date:  2000-06-15       Impact factor: 16.971

Review 2.  Emerging Public Health Challenges of Shiga Toxin-Producing Escherichia coli Related to Changes in the Pathogen, the Population, and the Environment.

Authors:  Mohamed A Karmali
Journal:  Clin Infect Dis       Date:  2016-10-21       Impact factor: 9.079

3.  General detection of Shiga toxin 2 and subtyping of Shiga toxin 1 and 2 in Escherichia coli using qPCR.

Authors:  Shuai Zhi; Jonas Szelewicki; Kim Ziebell; Brendon Parsons; Linda Chui
Journal:  J Microbiol Methods       Date:  2019-02-14       Impact factor: 2.363

Review 4.  Molecular epidemiological view on Shiga toxin-producing Escherichia coli causing human disease in Germany: Diversity, prevalence, and outbreaks.

Authors:  Angelika Fruth; Rita Prager; Erhard Tietze; Wolfgang Rabsch; Antje Flieger
Journal:  Int J Med Microbiol       Date:  2015-08-21       Impact factor: 3.473

5.  Shiga toxin gene loss and transfer in vitro and in vivo during enterohemorrhagic Escherichia coli O26 infection in humans.

Authors:  Martina Bielaszewska; Rita Prager; Robin Köck; Alexander Mellmann; Wenlan Zhang; Helmut Tschäpe; Phillip I Tarr; Helge Karch
Journal:  Appl Environ Microbiol       Date:  2007-03-30       Impact factor: 4.792

6.  Shiga toxin 2-encoding bacteriophages in human fecal samples from healthy individuals.

Authors:  Alexandre Martinez-Castillo; Pablo Quirós; Ferran Navarro; Elisenda Miró; Maite Muniesa
Journal:  Appl Environ Microbiol       Date:  2013-06-07       Impact factor: 4.792

7.  Shiga toxin, cytolethal distending toxin, and hemolysin repertoires in clinical Escherichia coli O91 isolates.

Authors:  Martina Bielaszewska; Franziska Stoewe; Angelika Fruth; Wenlan Zhang; Rita Prager; Jens Brockmeyer; Alexander Mellmann; Helge Karch; Alexander W Friedrich
Journal:  J Clin Microbiol       Date:  2009-04-29       Impact factor: 5.948

Review 8.  Detection, Characterization, and Typing of Shiga Toxin-Producing Escherichia coli.

Authors:  Brendon D Parsons; Nathan Zelyas; Byron M Berenger; Linda Chui
Journal:  Front Microbiol       Date:  2016-04-12       Impact factor: 5.640

9.  Enteroinvasive Escherichia coli May Account for Uncultured Shigella.

Authors:  Iruka N Okeke; Aaron O Aboderin; Japheth A Opintan
Journal:  Am J Trop Med Hyg       Date:  2016-02       Impact factor: 2.345

10.  Acute diarrhoea due to a Shiga toxin 2e-producing Escherichia coli O8 : H19.

Authors:  Angela Saupe; Birgit Edel; Wolfgang Pfister; Bettina Löffler; Ralf Ehricht; Jürgen Rödel
Journal:  JMM Case Rep       Date:  2017-06-14
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.