Literature DB >> 31526596

ncRNA-Encoded Peptides or Proteins and Cancer.

Jizhong Wang1, Song Zhu1, Nan Meng1, Yutian He1, Ruixun Lu2, Guang-Rong Yan3.   

Abstract

Non-coding RNAs (ncRNAs) are unique RNA transcripts that have been widely identified in the eukaryotic genome and have been shown to play key roles in the development of many cancers. However, the rapid development of genome-wide translation profiling and ribosome profiling has revealed that a small number of small open reading frames (sORFs) within ncRNAs actually have peptide- or protein-coding potential. The peptides or proteins encoded by ncRNA (HOXB-AS3, encoded by long ncRNA [lncRNA]; FBXW7-185aa, PINT-87aa, and SHPRH-146aa, encoded by circular RNA [circRNA]; and miPEP-200a and miPEP-200b, encoded by primary miRNAs) have been shown to be critical players in cancer development and progression, through effects upon the regulation of glucose metabolism, the epithelial-to-mesenchymal transition, and the ubiquitination pathway. In this review, we summarize the reported peptides or proteins encoded by ncRNAs in cancer and explore the application of these peptides or proteins in the development of anti-tumor drugs and the identification of relevant therapeutic targets and tumor biomarkers.
Copyright © 2019 The American Society of Gene and Cell Therapy. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  cancer; circRNA; lncRNA; miRNA; ncRNA; peptide; protein

Mesh:

Substances:

Year:  2019        PMID: 31526596      PMCID: PMC6822234          DOI: 10.1016/j.ymthe.2019.09.001

Source DB:  PubMed          Journal:  Mol Ther        ISSN: 1525-0016            Impact factor:   11.454


  71 in total

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Authors:  Delphine Bernard; Kannanganattu V Prasanth; Vidisha Tripathi; Sabrina Colasse; Tetsuya Nakamura; Zhenyu Xuan; Michael Q Zhang; Frédéric Sedel; Laurent Jourdren; Fanny Coulpier; Antoine Triller; David L Spector; Alain Bessis
Journal:  EMBO J       Date:  2010-08-20       Impact factor: 11.598

2.  Initiation of protein synthesis by the eukaryotic translational apparatus on circular RNAs.

Authors:  C Y Chen; P Sarnow
Journal:  Science       Date:  1995-04-21       Impact factor: 47.728

Review 3.  Long noncoding RNAs and human disease.

Authors:  Orly Wapinski; Howard Y Chang
Journal:  Trends Cell Biol       Date:  2011-05-06       Impact factor: 20.808

4.  Exon-intron circular RNAs regulate transcription in the nucleus.

Authors:  Zhaoyong Li; Chuan Huang; Chun Bao; Liang Chen; Mei Lin; Xiaolin Wang; Guolin Zhong; Bin Yu; Wanchen Hu; Limin Dai; Pengfei Zhu; Zhaoxia Chang; Qingfa Wu; Yi Zhao; Ya Jia; Ping Xu; Huijie Liu; Ge Shan
Journal:  Nat Struct Mol Biol       Date:  2015-02-09       Impact factor: 15.369

Review 5.  Regulation of circRNA biogenesis.

Authors:  Ling-Ling Chen; Li Yang
Journal:  RNA Biol       Date:  2015       Impact factor: 4.652

6.  circRNA biogenesis competes with pre-mRNA splicing.

Authors:  Reut Ashwal-Fluss; Markus Meyer; Nagarjuna Reddy Pamudurti; Andranik Ivanov; Osnat Bartok; Mor Hanan; Naveh Evantal; Sebastian Memczak; Nikolaus Rajewsky; Sebastian Kadener
Journal:  Mol Cell       Date:  2014-09-18       Impact factor: 17.970

7.  A Peptide Encoded by a Putative lncRNA HOXB-AS3 Suppresses Colon Cancer Growth.

Authors:  Jin-Zhou Huang; Min Chen; Xing-Cheng Gao; Song Zhu; Hongyang Huang; Min Hu; Huifang Zhu; Guang-Rong Yan
Journal:  Mol Cell       Date:  2017-10-05       Impact factor: 17.970

8.  Circ-ZNF609 Is a Circular RNA that Can Be Translated and Functions in Myogenesis.

Authors:  Ivano Legnini; Gaia Di Timoteo; Francesca Rossi; Mariangela Morlando; Francesca Briganti; Olga Sthandier; Alessandro Fatica; Tiziana Santini; Adrian Andronache; Mark Wade; Pietro Laneve; Nikolaus Rajewsky; Irene Bozzoni
Journal:  Mol Cell       Date:  2017-03-23       Impact factor: 17.970

Review 9.  The long and short of microRNA.

Authors:  Luke A Yates; Chris J Norbury; Robert J C Gilbert
Journal:  Cell       Date:  2013-04-25       Impact factor: 41.582

10.  Long non-coding RNA TPT1-AS1 promotes cell growth and metastasis in cervical cancer via acting AS a sponge for miR-324-5p.

Authors:  Hui Jiang; Guanqun Huang; Nianzhang Zhao; Ting Zhang; Mengni Jiang; Yueming He; Xinke Zhou; Xianhan Jiang
Journal:  J Exp Clin Cancer Res       Date:  2018-07-25
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  77 in total

1.  RP11-323N12.5 promotes the malignancy and immunosuppression of human gastric cancer by increasing YAP1 transcription.

Authors:  Jianjun Wang; Feng Huang; Yaxiang Shi; Qinghui Zhang; Song Xu; Yongliang Yao; Runqiu Jiang
Journal:  Gastric Cancer       Date:  2020-07-04       Impact factor: 7.370

2.  lncRNA-encoded pep-AP attenuates the pentose phosphate pathway and sensitizes colorectal cancer cells to Oxaliplatin.

Authors:  Xinyi Wang; Haiyang Zhang; Shengjie Yin; Yuchong Yang; Haiou Yang; Jiayu Yang; Zhengyang Zhou; Shuang Li; Guoguang Ying; Yi Ba
Journal:  EMBO Rep       Date:  2021-11-15       Impact factor: 8.807

3.  Long non-coding RNA NCK1-AS1 promotes the proliferation, migration and invasion of non-small cell lung cancer cells by acting as a ceRNA of miR-137.

Authors:  Jianxin Li; Xinglong Wu; Wenxia Cao; Jianqiang Zhao
Journal:  Am J Transl Res       Date:  2020-10-15       Impact factor: 4.060

4.  The Circular RNA circSKA3 Binds Integrin β1 to Induce Invadopodium Formation Enhancing Breast Cancer Invasion.

Authors:  William W Du; Weining Yang; Xiangmin Li; Ling Fang; Nan Wu; Feiya Li; Yu Chen; Qihan He; Elizabeth Liu; Zhenguo Yang; Faryal Mehwish Awan; Mingyao Liu; Burton B Yang
Journal:  Mol Ther       Date:  2020-03-10       Impact factor: 11.454

Review 5.  Quantitative proteomics characterization of cancer biomarkers and treatment.

Authors:  Xiao-Li Yang; Yi Shi; Dan-Dan Zhang; Rui Xin; Jing Deng; Ting-Miao Wu; Hui-Min Wang; Pei-Yao Wang; Ji-Bin Liu; Wen Li; Yu-Shui Ma; Da Fu
Journal:  Mol Ther Oncolytics       Date:  2021-04-20       Impact factor: 7.200

6.  Construction of a Myc-associated ceRNA network reveals a prognostic signature in hepatocellular carcinoma.

Authors:  Dan-Dan Zhang; Yi Shi; Ji-Bin Liu; Xiao-Li Yang; Rui Xin; Hui-Min Wang; Pei-Yao Wang; Cheng-You Jia; Wen-Jie Zhang; Yu-Shui Ma; Da Fu
Journal:  Mol Ther Nucleic Acids       Date:  2021-05-01       Impact factor: 8.886

Review 7.  Molecular Alterations in Gastric Intestinal Metaplasia.

Authors:  Paulius Jonaitis; Limas Kupcinskas; Juozas Kupcinskas
Journal:  Int J Mol Sci       Date:  2021-05-28       Impact factor: 5.923

Review 8.  Epigenetics: Roles and therapeutic implications of non-coding RNA modifications in human cancers.

Authors:  Dawei Rong; Guangshun Sun; Fan Wu; Ye Cheng; Guoqiang Sun; Wei Jiang; Xiao Li; Yi Zhong; Liangliang Wu; Chuanyong Zhang; Weiwei Tang; Xuehao Wang
Journal:  Mol Ther Nucleic Acids       Date:  2021-05-01       Impact factor: 8.886

9.  The cardiac translational landscape reveals that micropeptides are new players involved in cardiomyocyte hypertrophy.

Authors:  Youchen Yan; Rong Tang; Bin Li; Liangping Cheng; Shangmei Ye; Tiqun Yang; Yan-Chuang Han; Chen Liu; Yugang Dong; Liang-Hu Qu; Kathy O Lui; Jian-Hua Yang; Zhan-Peng Huang
Journal:  Mol Ther       Date:  2021-03-05       Impact factor: 12.910

10.  Hsa_circRNA_100146 Promotes Prostate Cancer Progression by Upregulating TRIP13 via Sponging miR-615-5p.

Authors:  Liang Zeng; Yi-Min Liu; Ning Yang; Tao Zhang; Huang Xie
Journal:  Front Mol Biosci       Date:  2021-07-07
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