Literature DB >> 31525475

Common genetic variation and risk of osteosarcoma in a multi-ethnic pediatric and adolescent population.

Chenan Zhang1, Helen M Hansen2, Eleanor C Semmes3, Julio Gonzalez-Maya2, Libby Morimoto4, Qingyi Wei5, William C Eward6, Suzanne B DeWitt7, Jillian H Hurst3, Catherine Metayer4, Adam J de Smith8, Joseph L Wiemels9, Kyle M Walsh10.   

Abstract

Osteosarcoma, a malignant primary bone tumor most commonly diagnosed in children and adolescents, has a poorly understood genetic etiology. Genome-wide association studies (GWAS) and candidate-gene analyses have identified putative risk variants in subjects of European ancestry. However, despite higher incidence among African-American and Hispanic children, little is known regarding common heritable variation that contributes to osteosarcoma incidence and clinical presentation across racial/ethnic groups. In a multi-ethnic sample of non-Hispanic white, Hispanic, African-American and Asian/Pacific Islander children (537 cases, 2165 controls), we performed association analyses assessing previously-reported loci for osteosarcoma risk and metastasis, including meta-analysis across racial/ethnic groups. We also assessed a previously described association between genetic predisposition to longer leukocyte telomere length (LTL) and osteosarcoma risk in this independent multi-ethnic dataset. In our sample, we were unable to replicate previously-reported loci for osteosarcoma risk or metastasis detected in GWAS of European-ancestry individuals in either ethnicity-stratified analyses or meta-analysis across ethnic groups. Our analyses did confirm that genetic predisposition to longer LTL is a risk factor for osteosarcoma (ORmeta: 1.22; 95% CI: 1.09-1.36; P = 3.8 × 10-4), and the strongest effect was seen in Hispanic subjects (OR: 1.32; 95% CI: 1.12-1.54, P = 6.2 × 10-4). Our findings shed light on the replicability of osteosarcoma risk loci across ethnicities and motivate further characterization of these genetic factors in diverse clinical cohorts.
Copyright © 2019 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Genome-wide association study; Mendelian randomization; Osteosarcoma; Polygenic risk score

Mesh:

Year:  2019        PMID: 31525475      PMCID: PMC6885126          DOI: 10.1016/j.bone.2019.115070

Source DB:  PubMed          Journal:  Bone        ISSN: 1873-2763            Impact factor:   4.398


  57 in total

1.  Association of GRM4 gene polymorphisms with susceptibility and clinicopathological characteristics of osteosarcoma in Guangxi Chinese population.

Authors:  Kun Wang; Jinmin Zhao; Maolin He; Mitra Fowdur; Tenglong Jiang; Shuju Luo
Journal:  Tumour Biol       Date:  2015-08-15

2.  Perinatal factors associated with clinical presentation of osteosarcoma in children and adolescents.

Authors:  Alyson A Endicott; Libby M Morimoto; Cassie N Kline; Joseph L Wiemels; Catherine Metayer; Kyle M Walsh
Journal:  Pediatr Blood Cancer       Date:  2016-11-10       Impact factor: 3.167

3.  Germ-line genetic variation of TP53 in osteosarcoma.

Authors:  Sharon A Savage; Laura Burdett; Rebecca Troisi; Chester Douglass; Robert N Hoover; Stephen J Chanock
Journal:  Pediatr Blood Cancer       Date:  2007-07       Impact factor: 3.167

4.  Common variants near TERC are associated with mean telomere length.

Authors:  Veryan Codd; Massimo Mangino; Pim van der Harst; Peter S Braund; Michael Kaiser; Alan J Beveridge; Suzanne Rafelt; Jasbir Moore; Chris Nelson; Nicole Soranzo; Guangju Zhai; Ana M Valdes; Hannah Blackburn; Irene Mateo Leach; Rudolf A de Boer; Masayuki Kimura; Abraham Aviv; Alison H Goodall; Willem Ouwehand; Dirk J van Veldhuisen; Wiek H van Gilst; Gerjan Navis; Paul R Burton; Martin D Tobin; Alistair S Hall; John R Thompson; Tim Spector; Nilesh J Samani
Journal:  Nat Genet       Date:  2010-02-07       Impact factor: 38.330

5.  GRM4 gene polymorphism is associated with susceptibility and prognosis of osteosarcoma in a Chinese Han population.

Authors:  Chaoyin Jiang; Hua Chen; Lei Shao; Yang Dong
Journal:  Med Oncol       Date:  2014-07       Impact factor: 3.064

6.  The effect on melanoma risk of genes previously associated with telomere length.

Authors:  Mark M Iles; D Timothy Bishop; John C Taylor; Nicholas K Hayward; Myriam Brossard; Anne E Cust; Alison M Dunning; Jeffrey E Lee; Eric K Moses; Lars A Akslen; Per A Andresen; Marie-Françoise Avril; Esther Azizi; Giovanna Bianchi Scarrà; Kevin M Brown; Tadeusz Dębniak; David E Elder; Eitan Friedman; Paola Ghiorzo; Elizabeth M Gillanders; Alisa M Goldstein; Nelleke A Gruis; Johan Hansson; Mark Harland; Per Helsing; Marko Hočevar; Veronica Höiom; Christian Ingvar; Peter A Kanetsky; Maria Teresa Landi; Julie Lang; G Mark Lathrop; Jan Lubiński; Rona M Mackie; Nicholas G Martin; Anders Molven; Grant W Montgomery; Srdjan Novaković; Håkan Olsson; Susana Puig; Joan Anton Puig-Butille; Graham L Radford-Smith; Juliette Randerson-Moor; Nienke van der Stoep; Remco van Doorn; David C Whiteman; Stuart MacGregor; Karen A Pooley; Sarah V Ward; Graham J Mann; Christopher I Amos; Paul D P Pharoah; Florence Demenais; Matthew H Law; Julia A Newton Bishop; Jennifer H Barrett
Journal:  J Natl Cancer Inst       Date:  2014-09-17       Impact factor: 11.816

7.  Race, Ethnicity, Psychosocial Factors, and Telomere Length in a Multicenter Setting.

Authors:  Shannon M Lynch; M K Peek; Nandita Mitra; Krithika Ravichandran; Charles Branas; Elaine Spangler; Wenting Zhou; Electra D Paskett; Sarah Gehlert; Cecilia DeGraffinreid; Timothy R Rebbeck; Harold Riethman
Journal:  PLoS One       Date:  2016-01-11       Impact factor: 3.240

8.  A reference panel of 64,976 haplotypes for genotype imputation.

Authors:  Shane McCarthy; Sayantan Das; Warren Kretzschmar; Olivier Delaneau; Andrew R Wood; Alexander Teumer; Hyun Min Kang; Christian Fuchsberger; Petr Danecek; Kevin Sharp; Yang Luo; Carlo Sidore; Alan Kwong; Nicholas Timpson; Seppo Koskinen; Scott Vrieze; Laura J Scott; He Zhang; Anubha Mahajan; Jan Veldink; Ulrike Peters; Carlos Pato; Cornelia M van Duijn; Christopher E Gillies; Ilaria Gandin; Massimo Mezzavilla; Arthur Gilly; Massimiliano Cocca; Michela Traglia; Andrea Angius; Jeffrey C Barrett; Dorrett Boomsma; Kari Branham; Gerome Breen; Chad M Brummett; Fabio Busonero; Harry Campbell; Andrew Chan; Sai Chen; Emily Chew; Francis S Collins; Laura J Corbin; George Davey Smith; George Dedoussis; Marcus Dorr; Aliki-Eleni Farmaki; Luigi Ferrucci; Lukas Forer; Ross M Fraser; Stacey Gabriel; Shawn Levy; Leif Groop; Tabitha Harrison; Andrew Hattersley; Oddgeir L Holmen; Kristian Hveem; Matthias Kretzler; James C Lee; Matt McGue; Thomas Meitinger; David Melzer; Josine L Min; Karen L Mohlke; John B Vincent; Matthias Nauck; Deborah Nickerson; Aarno Palotie; Michele Pato; Nicola Pirastu; Melvin McInnis; J Brent Richards; Cinzia Sala; Veikko Salomaa; David Schlessinger; Sebastian Schoenherr; P Eline Slagboom; Kerrin Small; Timothy Spector; Dwight Stambolian; Marcus Tuke; Jaakko Tuomilehto; Leonard H Van den Berg; Wouter Van Rheenen; Uwe Volker; Cisca Wijmenga; Daniela Toniolo; Eleftheria Zeggini; Paolo Gasparini; Matthew G Sampson; James F Wilson; Timothy Frayling; Paul I W de Bakker; Morris A Swertz; Steven McCarroll; Charles Kooperberg; Annelot Dekker; David Altshuler; Cristen Willer; William Iacono; Samuli Ripatti; Nicole Soranzo; Klaudia Walter; Anand Swaroop; Francesco Cucca; Carl A Anderson; Richard M Myers; Michael Boehnke; Mark I McCarthy; Richard Durbin
Journal:  Nat Genet       Date:  2016-08-22       Impact factor: 38.330

9.  A genome-wide association study identifies a locus on TERT for mean telomere length in Han Chinese.

Authors:  Yun Liu; Lan Cao; Zhiqiang Li; Daizhan Zhou; Wanqing Liu; Qin Shen; Yanting Wu; Dan Zhang; Xun Hu; Ting Wang; Junyi Ye; Xiaoling Weng; Hong Zhang; Di Zhang; Zhou Zhang; Fatao Liu; Lin He; Yongyong Shi
Journal:  PLoS One       Date:  2014-01-21       Impact factor: 3.240

Review 10.  Leucocyte telomere length and risk of cardiovascular disease: systematic review and meta-analysis.

Authors:  Philip C Haycock; Emma E Heydon; Stephen Kaptoge; Adam S Butterworth; Alex Thompson; Peter Willeit
Journal:  BMJ       Date:  2014-07-08
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  12 in total

1.  Leukocyte telomere length is associated with aggressive prostate cancer in localized prostate cancer patients.

Authors:  Junfeng Xu; Wen-Shin Chang; Chia-Wen Tsai; Da-Tian Bau; Yifan Xu; John W Davis; Timothy C Thompson; Christopher J Logothetis; Jian Gu
Journal:  EBioMedicine       Date:  2020-01-22       Impact factor: 8.143

2.  Long telomeres in need of a SNP: Germline contributions of telomere maintenance to glioma.

Authors:  Linda Kachuri; Kyle M Walsh
Journal:  Neuro Oncol       Date:  2022-02-01       Impact factor: 13.029

3.  Prognostic value of p16, p53, and pcna in sarcoma and an evaluation of immune infiltration.

Authors:  Dechao Cai; Xiao Ma; Huihui Guo; Haotian Zhang; Ashuai Bian; Haoran Yu; Wendan Cheng
Journal:  J Orthop Surg Res       Date:  2022-06-10       Impact factor: 2.677

4.  Genetic variation associated with childhood and adult stature and risk of MYCN-amplified neuroblastoma.

Authors:  Eleanor C Semmes; Erica Shen; Jennifer L Cohen; Chenan Zhang; Qingyi Wei; Jillian H Hurst; Kyle M Walsh
Journal:  Cancer Med       Date:  2020-09-17       Impact factor: 4.452

5.  Clinicopathological value of the upregulation of cyclin-dependent kinases regulatory subunit 2 in osteosarcoma.

Authors:  Chaohua Mo; Yanxing Wu; Jie Ma; Le Xie; Yingxin Huang; Yuanyuan Xu; Huizhi Peng; Zengwei Chen; Min Zeng; Rongjun Mao
Journal:  BMC Med Genomics       Date:  2022-04-11       Impact factor: 3.063

6.  Long Leukocyte Telomere Length Is Associated with Increased Risks of Soft Tissue Sarcoma: A Mendelian Randomization Study.

Authors:  Yifan Xu; Junfeng Xu; Haidee Chancoco; Maosheng Huang; Keila E Torres; Jian Gu
Journal:  Cancers (Basel)       Date:  2020-03-05       Impact factor: 6.639

Review 7.  Telomere Maintenance in Pediatric Cancer.

Authors:  Sandra Ackermann; Matthias Fischer
Journal:  Int J Mol Sci       Date:  2019-11-20       Impact factor: 5.923

Review 8.  Genetic Predisposition to Solid Pediatric Cancers.

Authors:  Mario Capasso; Annalaura Montella; Matilde Tirelli; Teresa Maiorino; Sueva Cantalupo; Achille Iolascon
Journal:  Front Oncol       Date:  2020-10-28       Impact factor: 6.244

9.  Systematic review of Mendelian randomization studies on risk of cancer.

Authors:  Georgios Markozannes; Afroditi Kanellopoulou; Olympia Dimopoulou; Dimitrios Kosmidis; Xiaomeng Zhang; Lijuan Wang; Evropi Theodoratou; Dipender Gill; Stephen Burgess; Konstantinos K Tsilidis
Journal:  BMC Med       Date:  2022-02-02       Impact factor: 11.150

10.  Genetic predisposition to longer telomere length and risk of childhood, adolescent and adult-onset ependymoma.

Authors:  Chenan Zhang; Quinn T Ostrom; Eleanor C Semmes; Vijay Ramaswamy; Helen M Hansen; Libby Morimoto; Adam J de Smith; Melike Pekmezci; Zalman Vaksman; Hakon Hakonarson; Sharon J Diskin; Catherine Metayer; Michael D Taylor; Joseph L Wiemels; Melissa L Bondy; Kyle M Walsh
Journal:  Acta Neuropathol Commun       Date:  2020-10-28       Impact factor: 7.578

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