Literature DB >> 31525408

Unfolding and partial refolding of a cellulase from the SDS-denatured state: From β-sheet to α-helix and back.

Helena Ø Rasmussen1, Jan J Enghild2, Daniel E Otzen3, Jan Skov Pedersen4.   

Abstract

Globular proteins are typically unfolded by SDS to form protein-decorated micelle-like structures. Several proteins have been shown subsequently to refold by addition of the nonionic surfactant octaethylene glycol monododecyl ether (C12E8). Thus SDS converts β-lactoglobulin, which has mainly β-sheet secondary structure, into a state rich in α-helicality, while addition of C12E8 leads to refolding and recovery of the original β-sheet structure. Here we extend these studies to the large β-sheet-rich cellulase Cel7b from Humicola insolens whose enzymatic activity provides a very sensitive refolding parameter. The enzymes widespread usage in the detergent industry makes it an obvious model system for protein-surfactant interactions. SDS-unfolding and subsequent refolding using C12E8 were investigated at pH 4.2 using near- and far-UV circular dichroism (CD), small-angle X-ray scattering (SAXS), isothermal titration calorimetry (ITC), size-exclusion chromatography (SEC) and activity measurements. The Cel7b:SDS complex can be described as a random configuration of 3-4 connected core-shell structures in which the protein is converted to a mainly α-helical secondary structure. Addition of C12E8 recovers almost all the secondary structure, part of the tertiary structure, about 50% of the activity and dissociates part of the protein population completely from detergent micelles. The lack of complete refolding may be due to charge neutralisation of Cel7b by SDS, kinetically trapping the enzyme into aggregated structures. In support of this, aggregates did not form when C12E8 was first mixed with Cel7b followed by addition of SDS. Formation of such aggregates may be a general phenomenon hampering quantitative refolding from the SDS-denatured state.
Copyright © 2019 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Cellulase; Charge neutralisation; Refolding; SAXS; Surfactant; Unfolding

Mesh:

Substances:

Year:  2019        PMID: 31525408     DOI: 10.1016/j.bbagen.2019.129434

Source DB:  PubMed          Journal:  Biochim Biophys Acta Gen Subj        ISSN: 0304-4165            Impact factor:   3.770


  5 in total

1.  Quantitating denaturation by formic acid: imperfect repeats are essential to the stability of the functional amyloid protein FapC.

Authors:  Line Friis Bakmann Christensen; Jan Stanislaw Nowak; Thorbjørn Vincent Sønderby; Signe Andrea Frank; Daniel Erik Otzen
Journal:  J Biol Chem       Date:  2020-07-21       Impact factor: 5.157

2.  Protein unfolding by SDS: the microscopic mechanisms and the properties of the SDS-protein assembly.

Authors:  David Winogradoff; Shalini John; Aleksei Aksimentiev
Journal:  Nanoscale       Date:  2020-02-21       Impact factor: 7.790

3.  Induction, inhibition, and incorporation: Different roles for anionic and zwitterionic lysolipids in the fibrillation of the functional amyloid FapC.

Authors:  Helena Østergaard Rasmussen; Daniel E Otzen; Jan Skov Pedersen
Journal:  J Biol Chem       Date:  2022-01-07       Impact factor: 5.157

4.  Circular Dichroism Spectra of α-Chymotrypsin-SDS Solutions Depend on the Procedure of Their Preparation.

Authors:  Karolina Stachurska; Urszula Marcisz; Maciej Długosz; Jan M Antosiewicz
Journal:  ACS Omega       Date:  2022-06-28

5.  Studies on the Structure and Properties of Membrane Phospholipase A1 Inclusion Bodies Formed at Low Growth Temperatures Using GFP Fusion Strategy.

Authors:  Svetlana I Bakholdina; Anna M Stenkova; Evgenia P Bystritskaya; Evgeniy V Sidorin; Natalya Yu Kim; Ekaterina S Menchinskaya; Tatiana Yu Gorpenchenko; Dmitry L Aminin; Nikita A Shved; Tamara F Solov'eva
Journal:  Molecules       Date:  2021-06-28       Impact factor: 4.411

  5 in total

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